Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os06t0597400-01
CDS Infomation	cds chromosome:IRGSP-1.0:6:23540501:23547137:1 gene:Os06g0597400 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:PINHEAD 1 description:PINHEAD/ZWILLE (PNH/ZLL) homologous protein, Shoot apical meristem (SAM) maintenance and leaf development (Os06t0597400-01)
Sequence	ATGCTCGAGGTGCTGGACATGGCGCCGCCCCGGCACCAGCCGGCAGCTGGGAAGGCGGGC GGCGGGCGCGGGCATGGGCATGGGCATGGGCATGGTGGTGGTGGTGGTGGGCCGGCGGCG AGGAAGCAGCCGTTGCAGAGTAGCATGGCGCAGCCCAAGGCGGAGACGGCGGCGGCGACG GCGGCGGTCGCGCCGCCGGAGGGAGGGAAGAAGTGCGGCGGCGGTGGCGGGAGGCGGCGC GGCGGGCGCGGGCGCGGCGGCAGGGCGGGTGCGGGGCCGGGGCCGGGGCTGGCGGCGGCG CCGGCCGTGGTGGTGGCGCCCGCGGCGCGCGCCGTCATTGGGCCGCCGGTGGCGAGCAAG GGGCTGTCGTTCTGCCGGCGGCCGGGGTTCGGGACGGTGGGCGCCCGGTGCGTCGTGAAG GCGAACCACTTCCTCGCCGAGCTCCCCGACAAGGATCTCACCCAGTACGACGTGAAGATC ACGCCGGAGGTGAGCTCCCGGAGCGTGAACCGGGCAATCATGTCGGAGCTGGTCCGCCTC TACCACGACTCCGATCTCGGAGGTCGCCTCCCGGCCTACGACGGCCGCAAGAACCTCTAT ACCGCCGGGACGCTCCCGTTCGACGCGCGCGAGTTCGTCGTCCGCCTCACCGACGACGAC GACGGCACCGGCGTCCCGCCACGGGAGAGGGAGTACAGGGTCGCCATCAAGTTCGCCGCG CGCGCCGACCTCCACCACCTCCGGCAGTTCATCGCCGGGCGCCAGGCCGACGCGCCGCAG GAGGCTCTCCAGGTGCTCGACATCGTGCTCCGTGAGCTTGCCAACCGCAGGTATGTCTCG ATAGGGCGGTCGTTCTACTCGCCGGACATAAGGAAGCCGCAGCGGCTCGGCGATGGCCTA CAGTCATGGTGTGGGTTCTACCAGAGCATCCGGCCGACTCAGATGGGGTTGTCGCTTAAC ATTGATATGTCATCTACCGCGTTCATCGAGCCGCTACCAGTGATCGAATTCGTGGCCCAA ATACTAGGGAAGGATGTCATATCGAGGCCATTGTCGGATGCAAACAGAATCAAGATCAAG AAAGCCTTGCGGGGCGTGAAAGTTGAAGTCACTCACCGGGGAAATGTGAGGCGGAAGTAT CGCATTTCAGGGCTGACAACACAACCAACTCATGAACTGATTTTCCCAATCGATGACCAA ATGAACATGAAATCTGTCGTAGAGTATTTCAAGGAAATGTATGGCTTCACCATTCAGCAT CCCCATCTTCCCTGCCTTCAGGTGGGAAACCAAAAGAAGGCAAACTATCTACCAATGGAG GCCTGTAAGATTGTTGAGGGTCAGAGATATACAAAGAGGTTGAATGAAAAGCAGATCACA TCATTACTCAAGGTTACTTGCCGTAGGCCTAGAGAACAGGAGATGGATATTCTACAGACA GTTCAACAAAATGGATATGAGCAAGACCCTTATGCAAAAGAATTTGGAATCAACATTAGT GAGAAGCTAACCTCAGTTGAAGCTCGGGTCCTTCCTGCACCTTGGCTGAAATATCATGAT ACTGGGAAGGAAAAGGAGTGCTTGCCACAAGTTGGTCAGTGGAACATGGTGAACAAGAAA GTGATAAATGGGTGCAAGGTGAATCATTGGGCTTGTATAAATTTCTCAAGGAGTGTGCAA GAAACTACTGCTCGGGGATTCTGCCAGGAGTTGGCACAAATGTGTCAGATATCCGGCATG GAATTCAACAGTGAGCCTGTGATACCAATATACTCAGCTAGACCAGATCAAGTAGAGAAG GCGCTTAAGCATGTGTATAATATGTCATTAAACAAGCTCAAGGGAAAAGAGCTTGAGCTT CTTTTGGCCATCCTCCCTGACAACAATGGTTCTTTATATGGTGATATAAAACGTATATGT GAAACTGACTTGGGGTTGATATCACAATGTTGCTTAACCAAACATGTTTTCAAGATCAGC AAGCAGTACCTGGCAAATGTCTCACTTAAAATCAATGTTAAGATGGGAGGAAGAAACACC GTGCTGCTGGATGCAATAAGTTGGAGGATTCCTTTGGTCAGTGACATACCAACTATTATA TTTGGTGCAGATGTCACGCATCCTGAAACCGGGGAGGACTCTAGCCCATCCATTGCTGCT GTTGTTGCATCTCAAGACTGGCCAGAAGTTACAAAGTATGCTGGATTGGTGTGTGCTCAG GCTCATCGGCAAGAGCTCATTCAAGATCTTTACAAGACATGGCATGATCCTCAAAGAGGC ACCGTAACAGGAGGCATGATCAGGGAGCTCTTAATATCCTTCAGGAAGGCCACTGGGCAA AAGCCATTGAGAATAATTTTCTACAGGGATGGTGTCAGTGAAGGCCAATTCTACCAAGTT CTCCTCTATGAGTTGGATGCTATCCGCAAGGCATGTGCATCTCTAGAACCAAATTATCAG CCTCCTGTAACATTCGTGGTTGTCCAAAAGCGTCACCATACAAGACTCTTCGCAAACAAT CACAAAGACAGAAGTAGCACGGACAAAAGTGGAAACATTTTGCCTGGAACTGTTGTTGAT TCAAAGATCTGCCACCCATCAGAGTTTGATTTCTACCTCTGTAGCCATGCTGGAATTCAG GGAACAAGTAGGCCAGCTCACTACCACGTCCTTTGGGATGAGAACAATTTCACTGCAGAC GAAATGCAGACATTGACAAACAACCTTTGCTACACTTATGCACGGTGCACACGCTCTGTT TCTGTTGTTCCACCTGCATACTATGCGCATCTGGCTGCGTTTCGAGCGCGGTTCTACATG GAGCCAGAGATGTCGGAGAACCAGACGACGTCGAAGAGCTCCACTGGGACGAACGGAACC TCGGTGAAGCCATTGCCTGCGGTGAAGGAGAAGGTGAAGAGGGTGATGTTCTACTGTTGA

Peptide Sequence

PEP ID	Os06t0597400-01
PEP Infomation	pep chromosome:IRGSP-1.0:6:23540501:23547137:1 gene:Os06g0597400 transcript:Os06t0597400-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:PINHEAD 1 description:PINHEAD/ZWILLE (PNH/ZLL) homologous protein, Shoot apical meristem (SAM) maintenance and leaf development (Os06t0597400-01)
Sequence	MLEVLDMAPPRHQPAAGKAGGGRGHGHGHGHGGGGGGPAARKQPLQSSMAQPKAETAAAT AAVAPPEGGKKCGGGGGRRRGGRGRGGRAGAGPGPGLAAAPAVVVAPAARAVIGPPVASK GLSFCRRPGFGTVGARCVVKANHFLAELPDKDLTQYDVKITPEVSSRSVNRAIMSELVRL YHDSDLGGRLPAYDGRKNLYTAGTLPFDAREFVVRLTDDDDGTGVPPREREYRVAIKFAA RADLHHLRQFIAGRQADAPQEALQVLDIVLRELANRRYVSIGRSFYSPDIRKPQRLGDGL QSWCGFYQSIRPTQMGLSLNIDMSSTAFIEPLPVIEFVAQILGKDVISRPLSDANRIKIK KALRGVKVEVTHRGNVRRKYRISGLTTQPTHELIFPIDDQMNMKSVVEYFKEMYGFTIQH PHLPCLQVGNQKKANYLPMEACKIVEGQRYTKRLNEKQITSLLKVTCRRPREQEMDILQT VQQNGYEQDPYAKEFGINISEKLTSVEARVLPAPWLKYHDTGKEKECLPQVGQWNMVNKK VINGCKVNHWACINFSRSVQETTARGFCQELAQMCQISGMEFNSEPVIPIYSARPDQVEK ALKHVYNMSLNKLKGKELELLLAILPDNNGSLYGDIKRICETDLGLISQCCLTKHVFKIS KQYLANVSLKINVKMGGRNTVLLDAISWRIPLVSDIPTIIFGADVTHPETGEDSSPSIAA VVASQDWPEVTKYAGLVCAQAHRQELIQDLYKTWHDPQRGTVTGGMIRELLISFRKATGQ KPLRIIFYRDGVSEGQFYQVLLYELDAIRKACASLEPNYQPPVTFVVVQKRHHTRLFANN HKDRSSTDKSGNILPGTVVDSKICHPSEFDFYLCSHAGIQGTSRPAHYHVLWDENNFTAD EMQTLTNNLCYTYARCTRSVSVVPPAYYAHLAAFRARFYMEPEMSENQTTSKSSTGTNGT SVKPLPAVKEKVKRVMFYC

Transcript Sequence

Transcript ID	Os06t0597400-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:6:23540501:23547137:1 gene:Os06g0597400 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:PINHEAD 1 description:PINHEAD/ZWILLE (PNH/ZLL) homologous protein, Shoot apical meristem (SAM) maintenance and leaf development (Os06t0597400-01)
Sequence	CTGCAGTAGTTGCATCAGTGACGAAGGGTTCTAATGCCTTTCTGTCCCGCCTCGCATTAA TTCTTTGGCTTGGTTGGATGCGAGAGAAAAAAGAGGAGAGATTTTGGTAGAATTGTAAGA TTTTTGTTACTACTACCACTCGTTTTCTTGGCTTGGTTTGGTTTGGTGTTTGATCACGCG GTGGTGACATTATAAGGGCGCGGTTGCGCAGGTGTTCGACCAGCGGGTGGCGAGGTCGGC GGCGAGGTGGTGGTGGTGCGCACATGCTCGAGGTGCTGGACATGGCGCCGCCCCGGCACC AGCCGGCAGCTGGGAAGGCGGGCGGCGGGCGCGGGCATGGGCATGGGCATGGGCATGGTG GTGGTGGTGGTGGGCCGGCGGCGAGGAAGCAGCCGTTGCAGAGTAGCATGGCGCAGCCCA AGGCGGAGACGGCGGCGGCGACGGCGGCGGTCGCGCCGCCGGAGGGAGGGAAGAAGTGCG GCGGCGGTGGCGGGAGGCGGCGCGGCGGGCGCGGGCGCGGCGGCAGGGCGGGTGCGGGGC CGGGGCCGGGGCTGGCGGCGGCGCCGGCCGTGGTGGTGGCGCCCGCGGCGCGCGCCGTCA TTGGGCCGCCGGTGGCGAGCAAGGGGCTGTCGTTCTGCCGGCGGCCGGGGTTCGGGACGG TGGGCGCCCGGTGCGTCGTGAAGGCGAACCACTTCCTCGCCGAGCTCCCCGACAAGGATC TCACCCAGTACGACGTGAAGATCACGCCGGAGGTGAGCTCCCGGAGCGTGAACCGGGCAA TCATGTCGGAGCTGGTCCGCCTCTACCACGACTCCGATCTCGGAGGTCGCCTCCCGGCCT ACGACGGCCGCAAGAACCTCTATACCGCCGGGACGCTCCCGTTCGACGCGCGCGAGTTCG TCGTCCGCCTCACCGACGACGACGACGGCACCGGCGTCCCGCCACGGGAGAGGGAGTACA GGGTCGCCATCAAGTTCGCCGCGCGCGCCGACCTCCACCACCTCCGGCAGTTCATCGCCG GGCGCCAGGCCGACGCGCCGCAGGAGGCTCTCCAGGTGCTCGACATCGTGCTCCGTGAGC TTGCCAACCGCAGGTATGTCTCGATAGGGCGGTCGTTCTACTCGCCGGACATAAGGAAGC CGCAGCGGCTCGGCGATGGCCTACAGTCATGGTGTGGGTTCTACCAGAGCATCCGGCCGA CTCAGATGGGGTTGTCGCTTAACATTGATATGTCATCTACCGCGTTCATCGAGCCGCTAC CAGTGATCGAATTCGTGGCCCAAATACTAGGGAAGGATGTCATATCGAGGCCATTGTCGG ATGCAAACAGAATCAAGATCAAGAAAGCCTTGCGGGGCGTGAAAGTTGAAGTCACTCACC GGGGAAATGTGAGGCGGAAGTATCGCATTTCAGGGCTGACAACACAACCAACTCATGAAC TGATTTTCCCAATCGATGACCAAATGAACATGAAATCTGTCGTAGAGTATTTCAAGGAAA TGTATGGCTTCACCATTCAGCATCCCCATCTTCCCTGCCTTCAGGTGGGAAACCAAAAGA AGGCAAACTATCTACCAATGGAGGCCTGTAAGATTGTTGAGGGTCAGAGATATACAAAGA GGTTGAATGAAAAGCAGATCACATCATTACTCAAGGTTACTTGCCGTAGGCCTAGAGAAC AGGAGATGGATATTCTACAGACAGTTCAACAAAATGGATATGAGCAAGACCCTTATGCAA AAGAATTTGGAATCAACATTAGTGAGAAGCTAACCTCAGTTGAAGCTCGGGTCCTTCCTG CACCTTGGCTGAAATATCATGATACTGGGAAGGAAAAGGAGTGCTTGCCACAAGTTGGTC AGTGGAACATGGTGAACAAGAAAGTGATAAATGGGTGCAAGGTGAATCATTGGGCTTGTA TAAATTTCTCAAGGAGTGTGCAAGAAACTACTGCTCGGGGATTCTGCCAGGAGTTGGCAC AAATGTGTCAGATATCCGGCATGGAATTCAACAGTGAGCCTGTGATACCAATATACTCAG CTAGACCAGATCAAGTAGAGAAGGCGCTTAAGCATGTGTATAATATGTCATTAAACAAGC TCAAGGGAAAAGAGCTTGAGCTTCTTTTGGCCATCCTCCCTGACAACAATGGTTCTTTAT ATGGTGATATAAAACGTATATGTGAAACTGACTTGGGGTTGATATCACAATGTTGCTTAA CCAAACATGTTTTCAAGATCAGCAAGCAGTACCTGGCAAATGTCTCACTTAAAATCAATG TTAAGATGGGAGGAAGAAACACCGTGCTGCTGGATGCAATAAGTTGGAGGATTCCTTTGG TCAGTGACATACCAACTATTATATTTGGTGCAGATGTCACGCATCCTGAAACCGGGGAGG ACTCTAGCCCATCCATTGCTGCTGTTGTTGCATCTCAAGACTGGCCAGAAGTTACAAAGT ATGCTGGATTGGTGTGTGCTCAGGCTCATCGGCAAGAGCTCATTCAAGATCTTTACAAGA CATGGCATGATCCTCAAAGAGGCACCGTAACAGGAGGCATGATCAGGGAGCTCTTAATAT CCTTCAGGAAGGCCACTGGGCAAAAGCCATTGAGAATAATTTTCTACAGGGATGGTGTCA GTGAAGGCCAATTCTACCAAGTTCTCCTCTATGAGTTGGATGCTATCCGCAAGGCATGTG CATCTCTAGAACCAAATTATCAGCCTCCTGTAACATTCGTGGTTGTCCAAAAGCGTCACC ATACAAGACTCTTCGCAAACAATCACAAAGACAGAAGTAGCACGGACAAAAGTGGAAACA TTTTGCCTGGAACTGTTGTTGATTCAAAGATCTGCCACCCATCAGAGTTTGATTTCTACC TCTGTAGCCATGCTGGAATTCAGGGAACAAGTAGGCCAGCTCACTACCACGTCCTTTGGG ATGAGAACAATTTCACTGCAGACGAAATGCAGACATTGACAAACAACCTTTGCTACACTT ATGCACGGTGCACACGCTCTGTTTCTGTTGTTCCACCTGCATACTATGCGCATCTGGCTG CGTTTCGAGCGCGGTTCTACATGGAGCCAGAGATGTCGGAGAACCAGACGACGTCGAAGA GCTCCACTGGGACGAACGGAACCTCGGTGAAGCCATTGCCTGCGGTGAAGGAGAAGGTGA AGAGGGTGATGTTCTACTGTTGATGACTGGGAGACTACCTTTAACTACTCACATATGATG TACCTAACATTGTAGAATTTTAGTGGTAGGGATTTAGAATTAGCTTCCTTCAGGAAAGGG AGCAGAGCAAGCATTTGGATCCTGAGCGACCTCTTTTGACCACTCTGTAAAGTACTAAGT AACGCATGTATAATAGTTGTTGTATCAGTCTGAAAAAAAGGAAGTGCACTCA