Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os06t0593100-01
CDS Infomation

cds chromosome:IRGSP-1.0:6:23303671:23306966:1 gene:Os06g0593100 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to UDP-galactose/UDP-glucose transporter. (Os06t0593100-01)
Sequence

ATGGTCACCGCGCGCAAGGGCCGCGGAGGCAGAGGCCCTCCCCGCCCCCGCGTCGTCGAC
GGCGGCGGAGGGAGCATGGTGTCGCGCGTGGCCGTGCTCGCATTCTGCGTCGCCGGGATC
TGGTCGGCGTACATCACCCAGGGCGTCCTCCAGGAAACCCTGTCGACGAAGCGGTTCGGG
CCGGAGGCGCGGCGGTTCGACCACCTCGCGTTCCTCAACTTCGCGCAGAACGTCGTCTGC
TTCGTCTGGTCCTTCATAATGATCAAGCTGTGGTCGAGTGGTGGGAGCTCCTCCGCTGGC
CGCGCGCCGCTGCGGAAGTACTGGGGCGTCAGCATCACCAACACTGTCGGCCCGGCCATG
GGGATCGAGGCGCTCAAGTTCATCAGCTACCCAGCTCAGGTCCTGGCAAAATCTTCTAAG
ATGATTCCAGTAATGCTGATGGGAACTATACTGTATGGTGTCAAGTACACATTTCCGGAG
TACATTTGCACCTTTCTTGTTGCTGGGGGTGTATCATCCTTTGCGTTGTTGAAGACAAGC
TCCAAGACTATCAAGAAGCTTGCTAACCCTAATGCGCCTCTGGGCTACACATTGTGCTTC
CTCAACTTAGCTTTTGATGGTTACACCAATTCGACCCAAGATTTGATAAAGTCTAGGTAT
CCAAAGACTAATCCATGGGATATAATGCTTGGCATGAATCTCTGGGGGACCATATACAAT
GCTGTGATTATGTTTGTTGCTCCATTACTATTCAGTAATTGGCCTTACGCCAACGGTTTT
GAGGCAGTGAGATTTTGCCAGGAGAACCCAGAGGTGGCATGGGACATTCTCCTGTTCTGC
CTGTGTGGTGCCGTGGGTCAGAATTTCATCTTCCTAACCATCAGCCGATTTGGCTCTCTT
ACTAACACTACCATCACCACCACCCGCAAGTTCATGAGCATTGTCATCTCCTCCGTCATC
AGTGGTAACCCACTCTCCTTGAAGCAATGGGGAAGTGTTGTGATGGTCTTTTCTGGTCTC
TCTTTACAAATCTTTCTCAAATGGAAGAGAAAGAAGGTCAGAGACCACAAGGAATGA

Peptide Sequence

PEP ID

Os06t0593100-01
PEP Infomation

pep chromosome:IRGSP-1.0:6:23303671:23306966:1 gene:Os06g0593100 transcript:Os06t0593100-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to UDP-galactose/UDP-glucose transporter. (Os06t0593100-01)
Sequence

MVTARKGRGGRGPPRPRVVDGGGGSMVSRVAVLAFCVAGIWSAYITQGVLQETLSTKRFG
PEARRFDHLAFLNFAQNVVCFVWSFIMIKLWSSGGSSSAGRAPLRKYWGVSITNTVGPAM
GIEALKFISYPAQVLAKSSKMIPVMLMGTILYGVKYTFPEYICTFLVAGGVSSFALLKTS
SKTIKKLANPNAPLGYTLCFLNLAFDGYTNSTQDLIKSRYPKTNPWDIMLGMNLWGTIYN
AVIMFVAPLLFSNWPYANGFEAVRFCQENPEVAWDILLFCLCGAVGQNFIFLTISRFGSL
TNTTITTTRKFMSIVISSVISGNPLSLKQWGSVVMVFSGLSLQIFLKWKRKKVRDHKE

Transcript Sequence

Transcript ID

Os06t0593100-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:6:23303671:23306966:1 gene:Os06g0593100 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to UDP-galactose/UDP-glucose transporter. (Os06t0593100-01)
Sequence

ACCGATCTCCCTCCCCCCTCGCCGGCGGCGCACCGACCGAACCGAACCGCGCCATGGTCA
CCGCGCGCAAGGGCCGCGGAGGCAGAGGCCCTCCCCGCCCCCGCGTCGTCGACGGCGGCG
GAGGGAGCATGGTGTCGCGCGTGGCCGTGCTCGCATTCTGCGTCGCCGGGATCTGGTCGG
CGTACATCACCCAGGGCGTCCTCCAGGAAACCCTGTCGACGAAGCGGTTCGGGCCGGAGG
CGCGGCGGTTCGACCACCTCGCGTTCCTCAACTTCGCGCAGAACGTCGTCTGCTTCGTCT
GGTCCTTCATAATGATCAAGCTGTGGTCGAGTGGTGGGAGCTCCTCCGCTGGCCGCGCGC
CGCTGCGGAAGTACTGGGGCGTCAGCATCACCAACACTGTCGGCCCGGCCATGGGGATCG
AGGCGCTCAAGTTCATCAGCTACCCAGCTCAGGTCCTGGCAAAATCTTCTAAGATGATTC
CAGTAATGCTGATGGGAACTATACTGTATGGTGTCAAGTACACATTTCCGGAGTACATTT
GCACCTTTCTTGTTGCTGGGGGTGTATCATCCTTTGCGTTGTTGAAGACAAGCTCCAAGA
CTATCAAGAAGCTTGCTAACCCTAATGCGCCTCTGGGCTACACATTGTGCTTCCTCAACT
TAGCTTTTGATGGTTACACCAATTCGACCCAAGATTTGATAAAGTCTAGGTATCCAAAGA
CTAATCCATGGGATATAATGCTTGGCATGAATCTCTGGGGGACCATATACAATGCTGTGA
TTATGTTTGTTGCTCCATTACTATTCAGTAATTGGCCTTACGCCAACGGTTTTGAGGCAG
TGAGATTTTGCCAGGAGAACCCAGAGGTGGCATGGGACATTCTCCTGTTCTGCCTGTGTG
GTGCCGTGGGTCAGAATTTCATCTTCCTAACCATCAGCCGATTTGGCTCTCTTACTAACA
CTACCATCACCACCACCCGCAAGTTCATGAGCATTGTCATCTCCTCCGTCATCAGTGGTA
ACCCACTCTCCTTGAAGCAATGGGGAAGTGTTGTGATGGTCTTTTCTGGTCTCTCTTTAC
AAATCTTTCTCAAATGGAAGAGAAAGAAGGTCAGAGACCACAAGGAATGAGTTTAATATT
TTAGCTCATTCCAATTTGTAGCTTCGATTGGACATGTTTGTTGTTGGGTTATATGGGAGA
TAATTATTGCAGCCCATTACTGATTCAGGAGAAGTTTTACATCGATAAAAAACTGAGATG
TATGGTAATAGCTAAAAAAATGCTGGTAGTTTCTGTTCTACAGGAAGTCAGGAAGAAGAT
GCAATGAATTGTATTGCACTGAGTAGTAGAATTGTATGGCGCCCTGTATTTTTGTTCTCT
CCCTAAAGGAATCGCTAATTATCAAAACGATAATTATGTTTCTGCCACTGAT