Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os06t0590301-01
CDS Infomation

cds chromosome:IRGSP-1.0:6:23181263:23184271:1 gene:Os06g0590301 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to short-chain dehydrogenase/reductase (SDR) family protein. (Os06t0590301-01)
Sequence

ATGTTCATCCAGAAGGCATGGAGGACGGCGGCGTTTGGGGTCTACGGCTTCACGCAGTTC
ACCAAATCCGGCTTCGTGGAACATGCCAAGAAATTCAGAGAGGAGGATATGCAGATCCGG
CTGGATGGGAAAAATTGCCTAGTAACTGGGGCTAATTCCGGCATAGGTTTTGCTACAGCC
GAGGGCTTGGCATCACGTGGTGCCACTGTTTATATGCTTTGCCGTAACAAGGAAAGAGGA
GAGACTGCTCTCAGTCAAATACGATCTAAAACTGGCAACATGAATGTTCATCTGGAGATT
TGTGACCTTTCATCTATCAGTGAAGTCAAATCATTTGCAACAAAATTCTCTTCAACAGAT
AAACCACTTCATGTCCTGGTTAACAATGCTGGTTTACTAGAGCACAAGCGTGTGACTACG
CCAGAAGGGTTGGAGCTCAATTTCGCTGTGAATGTAGCAGCAACATACACTTTAACAGAG
CTAGTAATGCCACTGTTGGAGAAAGCAGCACCTGATGCTCGTGTCATTACAGTTTCTTCA
GGAGGTATGTACACCGAGCCATTGAACAAGGATTTGCAGTTCGGTGAAAACAACTTCGAT
GGAACACAGCAATATGCCCGTAACAAAAGAGTTCAGGTTGCACTCACCGAACGGTGGTCT
GAAAAATGCAGCAACAAGGGGGTAGGTTTCTATTCGATGCATCCAGGATGGGCTGACACA
CCTGGAGTCTCCAAGAGCCTGCCTGGGCTTTCAGAGAAGTTATCAGGAAACCTGAGATCA
AACGATGAAGGTGCTGATACAGTGATCTGGTTAGCTTTGCAACCCAAAGAGAAGCTAACC
TCAGGGTCTTTCTACTTTGACCGAGCTGAAGCACCGAAACATCTGAAGTTTGCTGGGACT
GCAGCTTCGCACGGGCAGATAGGCTCGATTGTTGATAGCCTTCGCTCCATTTGTGGCATT
TAG

Peptide Sequence

PEP ID

Os06t0590301-01
PEP Infomation

pep chromosome:IRGSP-1.0:6:23181263:23184271:1 gene:Os06g0590301 transcript:Os06t0590301-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to short-chain dehydrogenase/reductase (SDR) family protein. (Os06t0590301-01)
Sequence

MFIQKAWRTAAFGVYGFTQFTKSGFVEHAKKFREEDMQIRLDGKNCLVTGANSGIGFATA
EGLASRGATVYMLCRNKERGETALSQIRSKTGNMNVHLEICDLSSISEVKSFATKFSSTD
KPLHVLVNNAGLLEHKRVTTPEGLELNFAVNVAATYTLTELVMPLLEKAAPDARVITVSS
GGMYTEPLNKDLQFGENNFDGTQQYARNKRVQVALTERWSEKCSNKGVGFYSMHPGWADT
PGVSKSLPGLSEKLSGNLRSNDEGADTVIWLALQPKEKLTSGSFYFDRAEAPKHLKFAGT
AASHGQIGSIVDSLRSICGI

Transcript Sequence

Transcript ID

Os06t0590301-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:6:23181263:23184271:1 gene:Os06g0590301 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to short-chain dehydrogenase/reductase (SDR) family protein. (Os06t0590301-01)
Sequence

AAGGAAGATCAAGCAGCGCGCGACGACGCGACAAATTCCCCCCCCCCCTCCCCCCTGCCG
GCTGCGGACGAACGAACGAACGAGCGAGCGAGCGAAGCGAGGAATTAAGATGTTCATCCA
GAAGGCATGGAGGACGGCGGCGTTTGGGGTCTACGGCTTCACGCAGTTCACCAAATCCGG
CTTCGTGGAACATGCCAAGAAATTCAGAGAGGAGGATATGCAGATCCGGCTGGATGGGAA
AAATTGCCTAGTAACTGGGGCTAATTCCGGCATAGGTTTTGCTACAGCCGAGGGCTTGGC
ATCACGTGGTGCCACTGTTTATATGCTTTGCCGTAACAAGGAAAGAGGAGAGACTGCTCT
CAGTCAAATACGATCTAAAACTGGCAACATGAATGTTCATCTGGAGATTTGTGACCTTTC
ATCTATCAGTGAAGTCAAATCATTTGCAACAAAATTCTCTTCAACAGATAAACCACTTCA
TGTCCTGGTTAACAATGCTGGTTTACTAGAGCACAAGCGTGTGACTACGCCAGAAGGGTT
GGAGCTCAATTTCGCTGTGAATGTAGCAGCAACATACACTTTAACAGAGCTAGTAATGCC
ACTGTTGGAGAAAGCAGCACCTGATGCTCGTGTCATTACAGTTTCTTCAGGAGGTATGTA
CACCGAGCCATTGAACAAGGATTTGCAGTTCGGTGAAAACAACTTCGATGGAACACAGCA
ATATGCCCGTAACAAAAGAGTTCAGGTTGCACTCACCGAACGGTGGTCTGAAAAATGCAG
CAACAAGGGGGTAGGTTTCTATTCGATGCATCCAGGATGGGCTGACACACCTGGAGTCTC
CAAGAGCCTGCCTGGGCTTTCAGAGAAGTTATCAGGAAACCTGAGATCAAACGATGAAGG
TGCTGATACAGTGATCTGGTTAGCTTTGCAACCCAAAGAGAAGCTAACCTCAGGGTCTTT
CTACTTTGACCGAGCTGAAGCACCGAAACATCTGAAGTTTGCTGGGACTGCAGCTTCGCA
CGGGCAGATAGGCTCGATTGTTGATAGCCTTCGCTCCATTTGTGGCATTTAGGGAAAAAA
TATTTGCTGGGACTGCAGCTTCCCACGTTCAGATAGGCTCGATTCTAGTTTCTGGATAGC
CTTGGCTCCATTTAAATTTGAC