Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os06t0589800-01
CDS Infomation	cds chromosome:IRGSP-1.0:6:23144729:23148845:-1 gene:Os06g0589800 gene_biotype:protein_coding transcript_biotype:protein_coding description:Protein kinase, core domain containing protein. (Os06t0589800-01)
Sequence	ATGGCGCACCGGGGCGACCGGTTCTTGGTGGTGGTGGTGGTGGTGGTGGTGTTGGGGGTG GTGGTGCGGCCGGCGGCGGCGCTGTCCGCGGACGGGAAGGCGCTGCTGTCGCTGCTGCCG GCGGCGGCGCCGTCGCCGGTGCTGCCGTCGTGGGACCCCACCGCCGCGACGCCGTGCTCG TGGCAGGGGGTGACGTGCTCGCCGCAGAGCCGGGTGGTGTCGCTGTCGCTGCCGAACACC TTCCTCAACCTGTCGTCGCTGCCGCCGCAGCTCGCGTCGCTGTCGTCGCTCCAGCTGCTC AACCTCTCCACCTGCAACATCTCCGGCGCCATCCCGCCGGCGTACGCGTCGCTCGCCGCG CTCCGCGTGCTGGACCTCTCGTCGAACGCGCTCTACGGCGACATCCCGGCGTCGCTCGGC GCGCTGTCGGGGCTCCAGTACCTGCTCCTCAACTCCAACCGCCTCACCGGCGCCATCCCG CGCTCCCTCGCCAGCCTCGCCGCGCTCCAGGTGCTCTGCGTCCAGGACAACCTCCTCAAC GGCACCATCCCAGCGTCGCTCGGCGCGCTCACCGCGCTCCAGCAGTTCCGCGTCGGCGGC AACCCGGGGCTGTCGGGCCCCATCCCGGCCTCCCTTGGCGCGCTCTCCAACCTCACCGTC TTCGGCGCCGCCGCCACCGCGCTGTCCGGCGCCATCCCGGAGGAGCTCGGCAACCTCGCC AACCTCCAGACGCTGGCATTGTACGACACCGGCGTGTCCGGCCCGATCCCCGCCGCGCTC GGCGGCTGCGCCGAGCTGCGCAACCTGTACCTCCACATGAACAAGCTCACCGGCCCGATA CCTCCGGAGCTCGGGCGGCTGCAAAAGCTCACCAGCCTGCTGCTCTGGGGCAACGCCCTG TCCGGGAGGATCCCGCCGGAGCTCTCCAACTGCTCGGCGCTCGTCGTGCTCGACCTCTCC GGCAACCGGCTCGCCGGCGAGGTGCCCGGGGCGCTCGGCCGCCTCGCCGCGCTCGAGCAG CTGCACCTGTCGGACAACCAGCTCGCGGGGCGCATCCCGGCGGAGCTGAGCAACTGCAGC AGCCTCACGGCGCTCCAGCTCGACAAGAACGGCCTGACCGGCGCCATCCCGCCGCAGCTC GGCGAGCTCAGGGCGCTGCAGGTGCTGTTCCTCTGGGGCAACGCGCTCTCCGGCGCGATA CCGCCGTCGCTCGGCAACTGCACCGAGCTGTACGCGCTCGACCTGTCCAGGAACCGCCTC GCCGGCGGCATCCCCGACGAGGTGTTCGCGCTGCAGAAGCTCAGCAAGCTGCTCCTCCTC GGGAACGCGCTCTCCGGGAGGCTCCCGCCGAGCGTCGCCGACTGCTCGTCGCTGGTGCGC CTCCGGCTCGGCGAGAACCAGCTCGCCGGCGAGATACCCAGGGAGATCGGCAAGCTGCCG AACCTGGTGTTCCTGGACCTCTACTCCAACAAGTTCACCGGCGCGCTCCCCGGCGAGCTC GCCAACATCACGGTGCTCGAGCTGCTCGACGTCCACAACAACAGCTTCACGGGTGCCATC CCGCCGCAGTTCGGCGAGCTCATGAACCTGGAGCAGCTTGACCTGAGCATGAACAAGCTC ACCGGCGAGATACCGGCGAGCTTCGGCAACTTCAGCTACCTCAACAAGCTCATCCTCAGC GGCAACATGCTCTCCGGGACATTGCCCAAGTCGATTCGCAACCTGCAGAAGCTGACCATG CTGGAGCTGAGCAACAACAGCTTCTCCGGTCCGATACCGCCGGAGATTGGCGCGCTCTCG AGCCTGAGCATTAGCCTTGACCTCAGCTCGAACAGGTTCACCGGCGAGCTGCCGGATGAG ATGTCCAGCTTGACGCAGCTGCAGTCGCTCGACCTCTCCAGCAATGGCTTGTATGGCAGC ATCTCAGTGTTGAGTGGGCTCACCAGCTTGACATCTCTCAACATTTCGTACAACAATTTC TCCGGCGCGATCCCGGTGACACCGTTCTTCAAGACATTGTCATCGAGCTCCTACATCAAC AATCCCAACCTCTGCGAGTCCTACGACGGGCACACTTGTGCATCAGACATGGTTCGCAGG ACGGCACTGAAGACCGTCAAGACCGTGATCCTTGTCTGTGCTGTTCTGGGCTCAATCACT CTGTTGCTTGTTGTGGTCTGGATCCTGATCAACAGAAGCAGAACACTCGCGGGCAAGAAG GCGATGAGCATGTCGGTTGCGGGTGGCGATGACTTCTCGCACCCGTGGACGTTCACGCCG TTCCAGAAGCTGAACTTCTGCGTCGATAACATCTTGGAGTGCCTGAGAGATGAGAATGTG ATCGGCAAAGGTTGCTCAGGTGTTGTGTACAGAGCTGAGATGCCGAATGGGGAGATCATC GCCGTGAAGAAGCTGTGGAAGACATCGAAGGAGGAGCCAATCGACGCGTTCGCTGCTGAG ATTCAGATATTGGGGCACATCAGGCACCGGAACATCGTCAAGCTGCTTGGTTACTGCTCA AACAAGTATGTTAAGCTCTTGCTCTACAACTACATCCCCAATGGCAATCTGCAACAGCTC CTGAAGGATAACAGGAGCCTGGACTGGGATACCCGGTACAAGATCGCCGTCGGCGCAGCA CAAGGGCTGGCCTATCTGCACCATGATTGCGTCCCGGCGATACTCCACCGCGATGTCAAG TGCAATAATATACTGCTTGATACGAAGTATGAGGCATACTTGGCTGACTTTGGGCTGGCC AAGCTGATGAACTCCCCCAACTATCATCATGCTATGTCACGCATCGCCGGTTCTTATGGA TACATTGCTCCAGAGTATGGCTACACCACGAAGATCACCGAGAAGAGCGACGTGTACAGC TACGGGGTGGTGCTCCTGGAGATCCTGAGCGGGCGGAGCGCGGTGGAGGCGGTGGTGGGC GACTCCCTCCACATCGTGGAGTGGGCGAAGAAGAAGATGGGGAGCTACGAGCCAGCGGTG AACATCCTGGACCCGAAGCTGCGCGGCATGCCGGACCAGCTGGTCCAGGAGATGCTGCAG ACGCTGGGGATCGCCATCTTCTGCGTGAACCCGGCGCCCGCGGAGCGGCCCACCATGAAG GAGGTGGTGGCCTTCCTCAAGGAGGTGAAGTGCTCTCCCGAGGAGTGGGGGAAGATCTCC CAGCAGCCGCTCATCAAGCCCGGGAGCCAGCAAGGTTGA

Peptide Sequence

PEP ID	Os06t0589800-01
PEP Infomation	pep chromosome:IRGSP-1.0:6:23144729:23148845:-1 gene:Os06g0589800 transcript:Os06t0589800-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Protein kinase, core domain containing protein. (Os06t0589800-01)
Sequence	MAHRGDRFLVVVVVVVVLGVVVRPAAALSADGKALLSLLPAAAPSPVLPSWDPTAATPCS WQGVTCSPQSRVVSLSLPNTFLNLSSLPPQLASLSSLQLLNLSTCNISGAIPPAYASLAA LRVLDLSSNALYGDIPASLGALSGLQYLLLNSNRLTGAIPRSLASLAALQVLCVQDNLLN GTIPASLGALTALQQFRVGGNPGLSGPIPASLGALSNLTVFGAAATALSGAIPEELGNLA NLQTLALYDTGVSGPIPAALGGCAELRNLYLHMNKLTGPIPPELGRLQKLTSLLLWGNAL SGRIPPELSNCSALVVLDLSGNRLAGEVPGALGRLAALEQLHLSDNQLAGRIPAELSNCS SLTALQLDKNGLTGAIPPQLGELRALQVLFLWGNALSGAIPPSLGNCTELYALDLSRNRL AGGIPDEVFALQKLSKLLLLGNALSGRLPPSVADCSSLVRLRLGENQLAGEIPREIGKLP NLVFLDLYSNKFTGALPGELANITVLELLDVHNNSFTGAIPPQFGELMNLEQLDLSMNKL TGEIPASFGNFSYLNKLILSGNMLSGTLPKSIRNLQKLTMLELSNNSFSGPIPPEIGALS SLSISLDLSSNRFTGELPDEMSSLTQLQSLDLSSNGLYGSISVLSGLTSLTSLNISYNNF SGAIPVTPFFKTLSSSSYINNPNLCESYDGHTCASDMVRRTALKTVKTVILVCAVLGSIT LLLVVVWILINRSRTLAGKKAMSMSVAGGDDFSHPWTFTPFQKLNFCVDNILECLRDENV IGKGCSGVVYRAEMPNGEIIAVKKLWKTSKEEPIDAFAAEIQILGHIRHRNIVKLLGYCS NKYVKLLLYNYIPNGNLQQLLKDNRSLDWDTRYKIAVGAAQGLAYLHHDCVPAILHRDVK CNNILLDTKYEAYLADFGLAKLMNSPNYHHAMSRIAGSYGYIAPEYGYTTKITEKSDVYS YGVVLLEILSGRSAVEAVVGDSLHIVEWAKKKMGSYEPAVNILDPKLRGMPDQLVQEMLQ TLGIAIFCVNPAPAERPTMKEVVAFLKEVKCSPEEWGKISQQPLIKPGSQQG

Transcript Sequence

Transcript ID	Os06t0589800-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:6:23144729:23148845:-1 gene:Os06g0589800 gene_biotype:protein_coding transcript_biotype:protein_coding description:Protein kinase, core domain containing protein. (Os06t0589800-01)
Sequence	GTAGCAGCGGCGACAGTAGCAGCAGCAACGCCTCCGCTCGCTCGATCGATCGATCGATCC ATCTCCTCGTCTAGCTCCATATGCGAGCTGGGGTGCGGCTTAAGCAACTCCAGCTCAAAG TAATCTTCTCACTAGCAAGCAAGCTCTCTCTCATGTCGTGAGGTGTAGATTAGGGGGGAG ATTTGTTCTTCTTTTTTGGTCTGGTTTTTTTTGTGGTTTCTTGATCGTTTTGGGGGGTAA TGGCGCACCGGGGCGACCGGTTCTTGGTGGTGGTGGTGGTGGTGGTGGTGTTGGGGGTGG TGGTGCGGCCGGCGGCGGCGCTGTCCGCGGACGGGAAGGCGCTGCTGTCGCTGCTGCCGG CGGCGGCGCCGTCGCCGGTGCTGCCGTCGTGGGACCCCACCGCCGCGACGCCGTGCTCGT GGCAGGGGGTGACGTGCTCGCCGCAGAGCCGGGTGGTGTCGCTGTCGCTGCCGAACACCT TCCTCAACCTGTCGTCGCTGCCGCCGCAGCTCGCGTCGCTGTCGTCGCTCCAGCTGCTCA ACCTCTCCACCTGCAACATCTCCGGCGCCATCCCGCCGGCGTACGCGTCGCTCGCCGCGC TCCGCGTGCTGGACCTCTCGTCGAACGCGCTCTACGGCGACATCCCGGCGTCGCTCGGCG CGCTGTCGGGGCTCCAGTACCTGCTCCTCAACTCCAACCGCCTCACCGGCGCCATCCCGC GCTCCCTCGCCAGCCTCGCCGCGCTCCAGGTGCTCTGCGTCCAGGACAACCTCCTCAACG GCACCATCCCAGCGTCGCTCGGCGCGCTCACCGCGCTCCAGCAGTTCCGCGTCGGCGGCA ACCCGGGGCTGTCGGGCCCCATCCCGGCCTCCCTTGGCGCGCTCTCCAACCTCACCGTCT TCGGCGCCGCCGCCACCGCGCTGTCCGGCGCCATCCCGGAGGAGCTCGGCAACCTCGCCA ACCTCCAGACGCTGGCATTGTACGACACCGGCGTGTCCGGCCCGATCCCCGCCGCGCTCG GCGGCTGCGCCGAGCTGCGCAACCTGTACCTCCACATGAACAAGCTCACCGGCCCGATAC CTCCGGAGCTCGGGCGGCTGCAAAAGCTCACCAGCCTGCTGCTCTGGGGCAACGCCCTGT CCGGGAGGATCCCGCCGGAGCTCTCCAACTGCTCGGCGCTCGTCGTGCTCGACCTCTCCG GCAACCGGCTCGCCGGCGAGGTGCCCGGGGCGCTCGGCCGCCTCGCCGCGCTCGAGCAGC TGCACCTGTCGGACAACCAGCTCGCGGGGCGCATCCCGGCGGAGCTGAGCAACTGCAGCA GCCTCACGGCGCTCCAGCTCGACAAGAACGGCCTGACCGGCGCCATCCCGCCGCAGCTCG GCGAGCTCAGGGCGCTGCAGGTGCTGTTCCTCTGGGGCAACGCGCTCTCCGGCGCGATAC CGCCGTCGCTCGGCAACTGCACCGAGCTGTACGCGCTCGACCTGTCCAGGAACCGCCTCG CCGGCGGCATCCCCGACGAGGTGTTCGCGCTGCAGAAGCTCAGCAAGCTGCTCCTCCTCG GGAACGCGCTCTCCGGGAGGCTCCCGCCGAGCGTCGCCGACTGCTCGTCGCTGGTGCGCC TCCGGCTCGGCGAGAACCAGCTCGCCGGCGAGATACCCAGGGAGATCGGCAAGCTGCCGA ACCTGGTGTTCCTGGACCTCTACTCCAACAAGTTCACCGGCGCGCTCCCCGGCGAGCTCG CCAACATCACGGTGCTCGAGCTGCTCGACGTCCACAACAACAGCTTCACGGGTGCCATCC CGCCGCAGTTCGGCGAGCTCATGAACCTGGAGCAGCTTGACCTGAGCATGAACAAGCTCA CCGGCGAGATACCGGCGAGCTTCGGCAACTTCAGCTACCTCAACAAGCTCATCCTCAGCG GCAACATGCTCTCCGGGACATTGCCCAAGTCGATTCGCAACCTGCAGAAGCTGACCATGC TGGAGCTGAGCAACAACAGCTTCTCCGGTCCGATACCGCCGGAGATTGGCGCGCTCTCGA GCCTGAGCATTAGCCTTGACCTCAGCTCGAACAGGTTCACCGGCGAGCTGCCGGATGAGA TGTCCAGCTTGACGCAGCTGCAGTCGCTCGACCTCTCCAGCAATGGCTTGTATGGCAGCA TCTCAGTGTTGAGTGGGCTCACCAGCTTGACATCTCTCAACATTTCGTACAACAATTTCT CCGGCGCGATCCCGGTGACACCGTTCTTCAAGACATTGTCATCGAGCTCCTACATCAACA ATCCCAACCTCTGCGAGTCCTACGACGGGCACACTTGTGCATCAGACATGGTTCGCAGGA CGGCACTGAAGACCGTCAAGACCGTGATCCTTGTCTGTGCTGTTCTGGGCTCAATCACTC TGTTGCTTGTTGTGGTCTGGATCCTGATCAACAGAAGCAGAACACTCGCGGGCAAGAAGG CGATGAGCATGTCGGTTGCGGGTGGCGATGACTTCTCGCACCCGTGGACGTTCACGCCGT TCCAGAAGCTGAACTTCTGCGTCGATAACATCTTGGAGTGCCTGAGAGATGAGAATGTGA TCGGCAAAGGTTGCTCAGGTGTTGTGTACAGAGCTGAGATGCCGAATGGGGAGATCATCG CCGTGAAGAAGCTGTGGAAGACATCGAAGGAGGAGCCAATCGACGCGTTCGCTGCTGAGA TTCAGATATTGGGGCACATCAGGCACCGGAACATCGTCAAGCTGCTTGGTTACTGCTCAA ACAAGTATGTTAAGCTCTTGCTCTACAACTACATCCCCAATGGCAATCTGCAACAGCTCC TGAAGGATAACAGGAGCCTGGACTGGGATACCCGGTACAAGATCGCCGTCGGCGCAGCAC AAGGGCTGGCCTATCTGCACCATGATTGCGTCCCGGCGATACTCCACCGCGATGTCAAGT GCAATAATATACTGCTTGATACGAAGTATGAGGCATACTTGGCTGACTTTGGGCTGGCCA AGCTGATGAACTCCCCCAACTATCATCATGCTATGTCACGCATCGCCGGTTCTTATGGAT ACATTGCTCCAGAGTATGGCTACACCACGAAGATCACCGAGAAGAGCGACGTGTACAGCT ACGGGGTGGTGCTCCTGGAGATCCTGAGCGGGCGGAGCGCGGTGGAGGCGGTGGTGGGCG ACTCCCTCCACATCGTGGAGTGGGCGAAGAAGAAGATGGGGAGCTACGAGCCAGCGGTGA ACATCCTGGACCCGAAGCTGCGCGGCATGCCGGACCAGCTGGTCCAGGAGATGCTGCAGA CGCTGGGGATCGCCATCTTCTGCGTGAACCCGGCGCCCGCGGAGCGGCCCACCATGAAGG AGGTGGTGGCCTTCCTCAAGGAGGTGAAGTGCTCTCCCGAGGAGTGGGGGAAGATCTCCC AGCAGCCGCTCATCAAGCCCGGGAGCCAGCAAGGTTGACATGAACATCAAGAACATGGAA CATGAACATTGCTGCTGGTGTAGCAGTTGATTCAGTGGCTCAGCAAGGGGTTCAAGGAGT AGGATTTTGATAAGATGCAGCCTAGCTTAGCTTGGGTTAGGGGGGTGGAAAAAAAATTTC TTGTACAGCTCCAAATGGCGTTGCGTTGCAGCTCATTTTGGTGAACTTTGAATGGGGAAA AATTCCGCGGTTATTTTGTTTGCT