Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os06t0589500-01
CDS Infomation

cds chromosome:IRGSP-1.0:6:23119059:23122162:1 gene:Os06g0589500 gene_biotype:protein_coding transcript_biotype:protein_coding description:Conserved hypothetical protein. (Os06t0589500-01)
Sequence

ATGGCGACGGCTTCCGGCGATCAGTCGGCGGGTTCCGCGGCGAGGGCGTCGAAGCTGAGG
TACCCGCTCCGGTCGGCGAGCCGGGGGAAGGGCGCCGCCGATGCTCCTCCGACGAGCGGC
TCCGTGGCGAGGAGTTTTATTCCTTGCAGACCAAAACCATCTTTGGATGTCAGCAAGAGC
GTTTGTGGTCTTGATCTTTCATCGGTGAAGGATAATTCAGCCAAACCTCCACGGAGGCAC
TCAATACAGACCAAGCCAGGTGTTAGCCCCAGGCCAACTCCTACAGGAACTATCACTCCT
GTGTCATTGGTTCGTTCAAGGAGGTCCGATAGTCAAGGGAAGTTTGATACCCCGATATCA
GAAGTTTCCATGTCCACAGCAAGGCGCAAGTTCAGCACTCTGTCCTCAACCTCATATTGG
ATGACACAAATCAGGCTTGCAGAGGCTGCTTCCAAGCACTCTATATCGTTGGGCTTCTTT
AAGCTTGCACTTGAATCAGAATGCGAGCCTCTGGATCGTATGAGAGATGAGCTAAAGGCT
TATGTTGTCCGGCATGGCCTTGCAACAGAGTTGGAGGAACCAGTGAAGGATATTCTTCAG
GTTTACAATATCGTGGAGGATCTTGAGAAGCTAAAGATCACTGTGAACTCTTCAGAACAG
CCGAAAAAGTCTGACAAGGCTGCTCATAGTGCCACCAATGTGTCACCAAAGGGTAATCTG
AAGCCAAGATCGCTGAATTCTGATGCAGCTCAAAGTAAGGAAGCAGCTAAAAAAGACAAC
ATTCAGAAGAAGCCTGATGCAAAGGTTAGAGGCTCCTACAACCGGAATCCTGCAAAAGAA
GCCATCACCAAGAATACTGGTAAGAAAGCCAAGAAGCAGGTCAAGGGGCAGAAGGAAGAT
TGCAATGGAGGCAGCGAGGCTTTGCCAGTTGGTACAGAGCAAGAACCTGTTGATGTGGTG
AAGGAGGTGACAAATGAAGATAAGGAGAATATGGGGGACAGTGAAATGCCAATGGATCTT
GGCATAGCCCAAGAAATCTAG

Peptide Sequence

PEP ID

Os06t0589500-01
PEP Infomation

pep chromosome:IRGSP-1.0:6:23119059:23122162:1 gene:Os06g0589500 transcript:Os06t0589500-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Conserved hypothetical protein. (Os06t0589500-01)
Sequence

MATASGDQSAGSAARASKLRYPLRSASRGKGAADAPPTSGSVARSFIPCRPKPSLDVSKS
VCGLDLSSVKDNSAKPPRRHSIQTKPGVSPRPTPTGTITPVSLVRSRRSDSQGKFDTPIS
EVSMSTARRKFSTLSSTSYWMTQIRLAEAASKHSISLGFFKLALESECEPLDRMRDELKA
YVVRHGLATELEEPVKDILQVYNIVEDLEKLKITVNSSEQPKKSDKAAHSATNVSPKGNL
KPRSLNSDAAQSKEAAKKDNIQKKPDAKVRGSYNRNPAKEAITKNTGKKAKKQVKGQKED
CNGGSEALPVGTEQEPVDVVKEVTNEDKENMGDSEMPMDLGIAQEI

Transcript Sequence

Transcript ID

Os06t0589500-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:6:23119059:23122162:1 gene:Os06g0589500 gene_biotype:protein_coding transcript_biotype:protein_coding description:Conserved hypothetical protein. (Os06t0589500-01)
Sequence

AAACGCAGAACTCGTTTCCCGTCTCGTCCGCATCGATCGGCGCCGGCAGTTTTCGAATTT
GGGGTTTGAGAAGGTTGAGGAGGAGTTGGGAGGTTGAGAAGGCGGCGGCTGATTCGTTGG
GTTCGATCGGGCTCATGGCGACGGCTTCCGGCGATCAGTCGGCGGGTTCCGCGGCGAGGG
CGTCGAAGCTGAGGTACCCGCTCCGGTCGGCGAGCCGGGGGAAGGGCGCCGCCGATGCTC
CTCCGACGAGCGGCTCCGTGGCGAGGAGTTTTATTCCTTGCAGACCAAAACCATCTTTGG
ATGTCAGCAAGAGCGTTTGTGGTCTTGATCTTTCATCGGTGAAGGATAATTCAGCCAAAC
CTCCACGGAGGCACTCAATACAGACCAAGCCAGGTGTTAGCCCCAGGCCAACTCCTACAG
GAACTATCACTCCTGTGTCATTGGTTCGTTCAAGGAGGTCCGATAGTCAAGGGAAGTTTG
ATACCCCGATATCAGAAGTTTCCATGTCCACAGCAAGGCGCAAGTTCAGCACTCTGTCCT
CAACCTCATATTGGATGACACAAATCAGGCTTGCAGAGGCTGCTTCCAAGCACTCTATAT
CGTTGGGCTTCTTTAAGCTTGCACTTGAATCAGAATGCGAGCCTCTGGATCGTATGAGAG
ATGAGCTAAAGGCTTATGTTGTCCGGCATGGCCTTGCAACAGAGTTGGAGGAACCAGTGA
AGGATATTCTTCAGGTTTACAATATCGTGGAGGATCTTGAGAAGCTAAAGATCACTGTGA
ACTCTTCAGAACAGCCGAAAAAGTCTGACAAGGCTGCTCATAGTGCCACCAATGTGTCAC
CAAAGGGTAATCTGAAGCCAAGATCGCTGAATTCTGATGCAGCTCAAAGTAAGGAAGCAG
CTAAAAAAGACAACATTCAGAAGAAGCCTGATGCAAAGGTTAGAGGCTCCTACAACCGGA
ATCCTGCAAAAGAAGCCATCACCAAGAATACTGGTAAGAAAGCCAAGAAGCAGGTCAAGG
GGCAGAAGGAAGATTGCAATGGAGGCAGCGAGGCTTTGCCAGTTGGTACAGAGCAAGAAC
CTGTTGATGTGGTGAAGGAGGTGACAAATGAAGATAAGGAGAATATGGGGGACAGTGAAA
TGCCAATGGATCTTGGCATAGCCCAAGAAATCTAGAACAACCAAACCGACTTCAGATTCA
AATCTTTTTATCGCTGGATATGAAGTAGAGTGTGTGGTGCTTGTTTTTTCCCCTCATTTG
TTCATATATCGCTGGAGCTTGCCTTATTATCAAAACCATAAAGAGGTCTTTAAGTGTGTA
GTATGGTTTGCAGGGTGGATGTTTGCTTTATTATCCCTTTGTTAAGTTTGCAATTCTGAA
TTGTCCAGTCATGCATCTGAATATAATTGAATTCTTT