Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os06t0588800-00
CDS Infomation	cds chromosome:IRGSP-1.0:6:23093973:23097578:1 gene:Os06g0588800 gene_biotype:protein_coding transcript_biotype:protein_coding description:Protein kinase, catalytic domain domain containing protein. (Os06t0588800-00)
Sequence	ATGCCATCCTCCAAGTTCCCACCATTCTCTCAAAAACGAACAGCAATGGCTGCTTTGAGA GTCTTCTCTACAGGCGTCATTTGCCATCTTATATTTCATTTCCTTTTCTTCCAGCCATTA GCCATCAGTGATGAAACTGAGACTGATCGAGACGCTCTCCTTTGCTTCAAGTCGCAGCTC TCAGGTCCAACTGGAGTTCTAGCCTCATGGAACAATGCATCCTTGTTACCCTGCAACTGG CATGGAGTCACATGCAGCAGGAGAGCTCCTCGCCGTGTTATCGCCATTGATCTCCCATCC GAAGGCATCATAGGCTCAATATCACCTTGTATTGCCAACATCACCTCTCTTACAAGGCTG CAACTATCAAACAATAGCTTCCATGGCGGCATACCGTCTGAGCTTGGCTTCCTGAACGAA CTCCAGAACCTCGACCTCAGCATGAACTCTCTGGAAGGTAACATACCATCAGAACTCTCT TCATGTTCACAACTTCAGATCCTAGATCTGCAGAACAATTCCCTGCAAGGTGAGATTCCA CCTAGTCTAAGTCAATGTGTGCATCTTCAACAAATTCTCCTTGGCAACAACAAGCTCCAA GGGAGCATCCCCTCTGCTTTTGGGGACCTTCCTAAACTGAGTGTACTTTTCCTGGCAAAC AACAGACTTTCAGGTGACATACCACCCTCTTTGGGCAGTAGCCTTACACTCACATATGTC AATCTTGGGAAGAATGCTCTTACCGGAGGGATCCCAAAGCCCATGTTGAATAGTTCATCT CTCCAACAACTCATTCTCAATAGCAATAGTCTCAGTGGAGAACTCCCAAAGGCTCTACTC AACACGTTGTCACTTAACGGCATTTACCTCAACCAGAACAATTTTTCCGGTTCTATACCA CCTGTTAAAACCGTCTCTCCACAAGTTCAATATCTTGATTTAGGAGAAAACTGTCTCACA GGAACAATACCTTCCTCTCTGGGGAACCTTTCCTCCCTACTTTATCTTCGCCTTTCACAG AATTGTTTAGATGGGAGCATACCAGAGAGCTTAGGACATATTCCAACGCTACAGACATTG ATGTTGACTTTGAACAATTTCTCTGGGACAATTCCACCACCCCTCTTCAATATGTCATCC CTGACATTTCTTACTGTGGCAAATAACTCACTCACCGGAAGATTACCTTTAGAGATCGGC TATACACTCCCAAACATTGAAGGCTTGATTCTATTAGCAAACAAGTTTAAGGGCTCAATT CCAACCTCTCTTCTCAATTCAACCCATCTACAAATGCTTTACCTAGCTGAAAACAAGTTA ACTGGAATCATGCCATCCTTTGGATCACTGACAAACTTGGAGGACCTTGATGTGGCATAC AACATGCTAGAAGCAGGCGACTGGGGCTTTATCTCGTCACTTTCAAATTGCACAAGATTG ACTAAGCTGATGTTGGATGGGAACAATCTTCAAGGAAACCTGCCAAGTTCTGTTGGCAAT CTATCTAGTAGTCTCCAACGGTTGTGGCTAAGAAATAATAAAATTTCCGGACCTATACCA CAAGAGATCGGCAATCTTAAGAGCCTCACTGAGTTGTACATGGATTACAATCAATTGACT GGAAATATATCTCTAACAATCGGAAATTTGCACAAATTAGGCATTCTGTCCTTTGCTCAA AACAGACTCTCTGGTCAAATCCCAGACAACATTGGGAAACTTGTTCAGCTGAATTATCTA AATTTGGATAGGAACAACTTGAGTGGAAGCATACCTCTGAGTATAGGGTATTGTACTCAA CTCGAAATACTCAACCTTGCTCACAATTCACTAAATGGAACAATACCAGAGACAATCTTT AAAATTTCTTCACTTTCAATGGTGTTAGACTTGTCATACAATTACTTGTCCGGAAGCATA TCAGATGAAGTAGGCAACCTTGTCAATCTGAATAAGCTTATCATTTCATACAACAGATTG TCTGGAGATATCCCATCCACTCTTAGTCAATGCGTGGTTCTAGAGTATCTTGAGATGCAA AGCAACTTCTTTGTAGGAAGCATTCCGCAAACATTTGTGAACATGTTAGGCATCAAGGTG ATGGATATATCTCATAACAACTTATCGGGAGAAATTCCACAGTTTCTAACGTTGTTGCGT TCTTTGCAAGTTCTCAACTTATCATTCAATAATTTTCATGGAGTGGTGCCAAGCAGTGGT ATTTTTGCCAATGCTAGTGTGGTGTCAATTGAAGGAAATGACCATCTGTGCACAGAAACT CCAACGACAGGTATGCCTCTTTGTTCAAAATTGGTTGACAAGAAAAGGAACCATAGTAGG TCATTGGTTCTAGTCCTAACGATAGTAATACCAATTGTTGCTATCACTTTCACTTTATTA TGCCTTGCAAAAATTATTTGTATGAAGAGAATGCAAGCAGAGCCACATGTACAACAGCTG AATGAGCACAGGAACATAACATATGAAGATGTTCTAAAGGCCACAAATAGATTCTCTTCA ACTAACTTACTTGGCTCAGGATCATTTGGTACAGTTTATAAGGGCAATCTGCATTTTCCT TTCAAAGAAAAGGGCAATCTGCATCTTCAGGAAGAACATATCGCCATCAAGATTTTTAAC CTTGATATCCATGGATCTAATAAGAGCTTTGTTGCCGAGTGTGAAACCCTACAAAATGTC CGCCACCGAAATCTCGTGAAAATTATTACTCTATGTTCTTCTGTGGATTCAACTGGGGCA GACTTCAAGGCTATAGTGTTCCCATATTTTCCAAATGGGAATCTAGATATGTGGTTACAT CCAAAATCCCATGAACATAGTAGTCAAACAAAGGTTCTGACTTTAAGACAGAGAATTAAT ATCGCCTTGGATGTAGCATTTGCTTTGGATTATCTTCATAACCAGTGTGAATTGCCATTA GTACATTGTGATTTGAAGCCAAGCAATATTCTGTTGGATAGTGACATGGTTGCACACGTC AGTGACTTTGGCCTAGCAAGATTTGTATACACAAGATCGAATGCACATAAAGATATATCA ACAAGCTTGGCTTGTCTAAAAGGATCTATTGGATATATTCCACCGGAGTATGGTATGAAC GAAGATATCTCAACCAAGGGTGATGTCTACAGCTTTGGAATCCTTCTCTTAGAAATGGTA ACAGGTAGCAGTCCTACCGATGAAAATTTTAATGGTGACACAACCCTGCATGATTTTGTT GATAGAGCATTGCCCGATAATACTCACGAGGTTGTTGATCCCACAATGCTACAAGATGAT ATCAGTGTAGCCGATATGATGGAGAGGTGTTTCGTTCCATTGGTTAAAATAGGACTCTCA TGTTCAATGGCATTGCCTAGAGAGCGGCCAGAAATGGGGCAGGTTTCTACCATGATTCTT AGAATCAAACATGCAGCCTCAAACATGGGTGTCAGATGA

Peptide Sequence

PEP ID	Os06t0588800-00
PEP Infomation	pep chromosome:IRGSP-1.0:6:23093973:23097578:1 gene:Os06g0588800 transcript:Os06t0588800-00 gene_biotype:protein_coding transcript_biotype:protein_coding description:Protein kinase, catalytic domain domain containing protein. (Os06t0588800-00)
Sequence	MPSSKFPPFSQKRTAMAALRVFSTGVICHLIFHFLFFQPLAISDETETDRDALLCFKSQL SGPTGVLASWNNASLLPCNWHGVTCSRRAPRRVIAIDLPSEGIIGSISPCIANITSLTRL QLSNNSFHGGIPSELGFLNELQNLDLSMNSLEGNIPSELSSCSQLQILDLQNNSLQGEIP PSLSQCVHLQQILLGNNKLQGSIPSAFGDLPKLSVLFLANNRLSGDIPPSLGSSLTLTYV NLGKNALTGGIPKPMLNSSSLQQLILNSNSLSGELPKALLNTLSLNGIYLNQNNFSGSIP PVKTVSPQVQYLDLGENCLTGTIPSSLGNLSSLLYLRLSQNCLDGSIPESLGHIPTLQTL MLTLNNFSGTIPPPLFNMSSLTFLTVANNSLTGRLPLEIGYTLPNIEGLILLANKFKGSI PTSLLNSTHLQMLYLAENKLTGIMPSFGSLTNLEDLDVAYNMLEAGDWGFISSLSNCTRL TKLMLDGNNLQGNLPSSVGNLSSSLQRLWLRNNKISGPIPQEIGNLKSLTELYMDYNQLT GNISLTIGNLHKLGILSFAQNRLSGQIPDNIGKLVQLNYLNLDRNNLSGSIPLSIGYCTQ LEILNLAHNSLNGTIPETIFKISSLSMVLDLSYNYLSGSISDEVGNLVNLNKLIISYNRL SGDIPSTLSQCVVLEYLEMQSNFFVGSIPQTFVNMLGIKVMDISHNNLSGEIPQFLTLLR SLQVLNLSFNNFHGVVPSSGIFANASVVSIEGNDHLCTETPTTGMPLCSKLVDKKRNHSR SLVLVLTIVIPIVAITFTLLCLAKIICMKRMQAEPHVQQLNEHRNITYEDVLKATNRFSS TNLLGSGSFGTVYKGNLHFPFKEKGNLHLQEEHIAIKIFNLDIHGSNKSFVAECETLQNV RHRNLVKIITLCSSVDSTGADFKAIVFPYFPNGNLDMWLHPKSHEHSSQTKVLTLRQRIN IALDVAFALDYLHNQCELPLVHCDLKPSNILLDSDMVAHVSDFGLARFVYTRSNAHKDIS TSLACLKGSIGYIPPEYGMNEDISTKGDVYSFGILLLEMVTGSSPTDENFNGDTTLHDFV DRALPDNTHEVVDPTMLQDDISVADMMERCFVPLVKIGLSCSMALPRERPEMGQVSTMIL RIKHAASNMGVR

Transcript Sequence

Transcript ID	Os06t0588800-00
Transcript Infomation	cdna chromosome:IRGSP-1.0:6:23093973:23097578:1 gene:Os06g0588800 gene_biotype:protein_coding transcript_biotype:protein_coding description:Protein kinase, catalytic domain domain containing protein. (Os06t0588800-00)
Sequence	ATGCCATCCTCCAAGTTCCCACCATTCTCTCAAAAACGAACAGCAATGGCTGCTTTGAGA GTCTTCTCTACAGGCGTCATTTGCCATCTTATATTTCATTTCCTTTTCTTCCAGCCATTA GCCATCAGTGATGAAACTGAGACTGATCGAGACGCTCTCCTTTGCTTCAAGTCGCAGCTC TCAGGTCCAACTGGAGTTCTAGCCTCATGGAACAATGCATCCTTGTTACCCTGCAACTGG CATGGAGTCACATGCAGCAGGAGAGCTCCTCGCCGTGTTATCGCCATTGATCTCCCATCC GAAGGCATCATAGGCTCAATATCACCTTGTATTGCCAACATCACCTCTCTTACAAGGCTG CAACTATCAAACAATAGCTTCCATGGCGGCATACCGTCTGAGCTTGGCTTCCTGAACGAA CTCCAGAACCTCGACCTCAGCATGAACTCTCTGGAAGGTAACATACCATCAGAACTCTCT TCATGTTCACAACTTCAGATCCTAGATCTGCAGAACAATTCCCTGCAAGGTGAGATTCCA CCTAGTCTAAGTCAATGTGTGCATCTTCAACAAATTCTCCTTGGCAACAACAAGCTCCAA GGGAGCATCCCCTCTGCTTTTGGGGACCTTCCTAAACTGAGTGTACTTTTCCTGGCAAAC AACAGACTTTCAGGTGACATACCACCCTCTTTGGGCAGTAGCCTTACACTCACATATGTC AATCTTGGGAAGAATGCTCTTACCGGAGGGATCCCAAAGCCCATGTTGAATAGTTCATCT CTCCAACAACTCATTCTCAATAGCAATAGTCTCAGTGGAGAACTCCCAAAGGCTCTACTC AACACGTTGTCACTTAACGGCATTTACCTCAACCAGAACAATTTTTCCGGTTCTATACCA CCTGTTAAAACCGTCTCTCCACAAGTTCAATATCTTGATTTAGGAGAAAACTGTCTCACA GGAACAATACCTTCCTCTCTGGGGAACCTTTCCTCCCTACTTTATCTTCGCCTTTCACAG AATTGTTTAGATGGGAGCATACCAGAGAGCTTAGGACATATTCCAACGCTACAGACATTG ATGTTGACTTTGAACAATTTCTCTGGGACAATTCCACCACCCCTCTTCAATATGTCATCC CTGACATTTCTTACTGTGGCAAATAACTCACTCACCGGAAGATTACCTTTAGAGATCGGC TATACACTCCCAAACATTGAAGGCTTGATTCTATTAGCAAACAAGTTTAAGGGCTCAATT CCAACCTCTCTTCTCAATTCAACCCATCTACAAATGCTTTACCTAGCTGAAAACAAGTTA ACTGGAATCATGCCATCCTTTGGATCACTGACAAACTTGGAGGACCTTGATGTGGCATAC AACATGCTAGAAGCAGGCGACTGGGGCTTTATCTCGTCACTTTCAAATTGCACAAGATTG ACTAAGCTGATGTTGGATGGGAACAATCTTCAAGGAAACCTGCCAAGTTCTGTTGGCAAT CTATCTAGTAGTCTCCAACGGTTGTGGCTAAGAAATAATAAAATTTCCGGACCTATACCA CAAGAGATCGGCAATCTTAAGAGCCTCACTGAGTTGTACATGGATTACAATCAATTGACT GGAAATATATCTCTAACAATCGGAAATTTGCACAAATTAGGCATTCTGTCCTTTGCTCAA AACAGACTCTCTGGTCAAATCCCAGACAACATTGGGAAACTTGTTCAGCTGAATTATCTA AATTTGGATAGGAACAACTTGAGTGGAAGCATACCTCTGAGTATAGGGTATTGTACTCAA CTCGAAATACTCAACCTTGCTCACAATTCACTAAATGGAACAATACCAGAGACAATCTTT AAAATTTCTTCACTTTCAATGGTGTTAGACTTGTCATACAATTACTTGTCCGGAAGCATA TCAGATGAAGTAGGCAACCTTGTCAATCTGAATAAGCTTATCATTTCATACAACAGATTG TCTGGAGATATCCCATCCACTCTTAGTCAATGCGTGGTTCTAGAGTATCTTGAGATGCAA AGCAACTTCTTTGTAGGAAGCATTCCGCAAACATTTGTGAACATGTTAGGCATCAAGGTG ATGGATATATCTCATAACAACTTATCGGGAGAAATTCCACAGTTTCTAACGTTGTTGCGT TCTTTGCAAGTTCTCAACTTATCATTCAATAATTTTCATGGAGTGGTGCCAAGCAGTGGT ATTTTTGCCAATGCTAGTGTGGTGTCAATTGAAGGAAATGACCATCTGTGCACAGAAACT CCAACGACAGGTATGCCTCTTTGTTCAAAATTGGTTGACAAGAAAAGGAACCATAGTAGG TCATTGGTTCTAGTCCTAACGATAGTAATACCAATTGTTGCTATCACTTTCACTTTATTA TGCCTTGCAAAAATTATTTGTATGAAGAGAATGCAAGCAGAGCCACATGTACAACAGCTG AATGAGCACAGGAACATAACATATGAAGATGTTCTAAAGGCCACAAATAGATTCTCTTCA ACTAACTTACTTGGCTCAGGATCATTTGGTACAGTTTATAAGGGCAATCTGCATTTTCCT TTCAAAGAAAAGGGCAATCTGCATCTTCAGGAAGAACATATCGCCATCAAGATTTTTAAC CTTGATATCCATGGATCTAATAAGAGCTTTGTTGCCGAGTGTGAAACCCTACAAAATGTC CGCCACCGAAATCTCGTGAAAATTATTACTCTATGTTCTTCTGTGGATTCAACTGGGGCA GACTTCAAGGCTATAGTGTTCCCATATTTTCCAAATGGGAATCTAGATATGTGGTTACAT CCAAAATCCCATGAACATAGTAGTCAAACAAAGGTTCTGACTTTAAGACAGAGAATTAAT ATCGCCTTGGATGTAGCATTTGCTTTGGATTATCTTCATAACCAGTGTGAATTGCCATTA GTACATTGTGATTTGAAGCCAAGCAATATTCTGTTGGATAGTGACATGGTTGCACACGTC AGTGACTTTGGCCTAGCAAGATTTGTATACACAAGATCGAATGCACATAAAGATATATCA ACAAGCTTGGCTTGTCTAAAAGGATCTATTGGATATATTCCACCGGAGTATGGTATGAAC GAAGATATCTCAACCAAGGGTGATGTCTACAGCTTTGGAATCCTTCTCTTAGAAATGGTA ACAGGTAGCAGTCCTACCGATGAAAATTTTAATGGTGACACAACCCTGCATGATTTTGTT GATAGAGCATTGCCCGATAATACTCACGAGGTTGTTGATCCCACAATGCTACAAGATGAT ATCAGTGTAGCCGATATGATGGAGAGGTGTTTCGTTCCATTGGTTAAAATAGGACTCTCA TGTTCAATGGCATTGCCTAGAGAGCGGCCAGAAATGGGGCAGGTTTCTACCATGATTCTT AGAATCAAACATGCAGCCTCAAACATGGGTGTCAGATGAGGCAAATTAAGATTTGGCAAT TTCATGTATAGAAGAATAGTAATGTAACATATT