Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os06t0583900-01
CDS Infomation	cds chromosome:IRGSP-1.0:6:22821117:22823386:1 gene:Os06g0583900 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Pectate lyase homolog (EC 4.2.2.2) (Fragment). (Os06t0583900-01)
Sequence	ATGGAGGTGCTGATCCGGTGGAGCAAGCTGCCGGCGGCCGGCTCCTTGGTGCTGTACGCC GTCTTCTTATTGCTGTCGGCGGCAGCCACATCGGAGGCCAACATCGGGGAGTACGATGAG TACTGGCAGAAGCGCAAGCTCATGGCTGATGCCGCCGCCGAGGCTACCTACAAGCGTGAC CCCTTCGAGGTCACCAACAGCTTCAACCGCGCCGTCCACAGATCGGAGGAGGAGAGCGGG AGGAGGGAGCTGGCGATGACGAAGAGGAAGAAGTTCGCGGGGCCGTGCAAGGCGACGAAC CCGATCGACCGGTGCTGGAGGTGCCGCGCCGACTGGGTGACGGACAGGAAGCGGCTGGCG CGGTGCGCGCAGGGGTTCGGCCGGAACACCACCGGAGGGCTGGCCGGGAAGTTCTACCTG GTGACGGACGGCACCGACGACGACGTGGAGAACCCGCGCCCGGGGACGCTCCGGTGGGGT GTCATCCAGGACGAGCCACTGTGGATCATCTTCGCCAAGGACATGATCATCAACCTCAAG GAGGAGATGATGATCAACAGCGACAAGACGATCGACGGGCGGGGAGCGCAGGTGCGGATC ACCAATGGCGCGCAGGTGACGGTGCAGAACTCCAACAACGTGATCATCCACAACATCCAC ATCCACGACATCTTGCAAGGCAAGGGCGGGATGATCCGCGACTCGCCGGAGCACTTCGGC TTCCGCACCCAGTCCGACGGCGACGGCATCAGCATCTTCGGCTCCACCAACGTCTGGCTC GACCACCTCTCCCTCTCCAACTGCCAGGACGGCCTCATCGACGTCATCGCCAAGTCCACC GGAGTCACCATCTCCAACTGCCACCTCACCAACCACAACGACGTCATGCTCTTCGGCTCC AGCGACTCCTTCAGCGAGGACCAGATCATGCAGATCACCGTCGCTTTCAACCACTTCGGC CGCGGCCTCGTCCAAAGAATGCCCAGATGCCGATGGGGATTTTTCCACGTGGTGAACAAC GACTACACGCACTGGCTCATGTATGCCATCGGAGGGAGCAAGAACCCGACGATCATCAGC CAGGGGAACAGGTACATCGCGCCGCCAAACCTAGCGGCGAAGCGGATCACGAAGCAGCTC GGGGCGACGGAGGAGGAGTGGAAGAACTGGGTGTGGCACTCTGAGGAGGACCTGTTCATG GAGGGGGCCTACTTCACCACGTCCGGTGGCCCGATCCAGAAGCAGTTCAGCAACAAGGAT CTGATCAAGCCCAAGCCCGGATCCTACGTCACGAGGCTCACCCGCTTCGCTGGCTCCATC CCATGCGTGGCCGGCAAGCCGTGCTAG

Peptide Sequence

PEP ID	Os06t0583900-01
PEP Infomation	pep chromosome:IRGSP-1.0:6:22821117:22823386:1 gene:Os06g0583900 transcript:Os06t0583900-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Pectate lyase homolog (EC 4.2.2.2) (Fragment). (Os06t0583900-01)
Sequence	MEVLIRWSKLPAAGSLVLYAVFLLLSAAATSEANIGEYDEYWQKRKLMADAAAEATYKRD PFEVTNSFNRAVHRSEEESGRRELAMTKRKKFAGPCKATNPIDRCWRCRADWVTDRKRLA RCAQGFGRNTTGGLAGKFYLVTDGTDDDVENPRPGTLRWGVIQDEPLWIIFAKDMIINLK EEMMINSDKTIDGRGAQVRITNGAQVTVQNSNNVIIHNIHIHDILQGKGGMIRDSPEHFG FRTQSDGDGISIFGSTNVWLDHLSLSNCQDGLIDVIAKSTGVTISNCHLTNHNDVMLFGS SDSFSEDQIMQITVAFNHFGRGLVQRMPRCRWGFFHVVNNDYTHWLMYAIGGSKNPTIIS QGNRYIAPPNLAAKRITKQLGATEEEWKNWVWHSEEDLFMEGAYFTTSGGPIQKQFSNKD LIKPKPGSYVTRLTRFAGSIPCVAGKPC

Transcript Sequence

Transcript ID	Os06t0583900-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:6:22821117:22823386:1 gene:Os06g0583900 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Pectate lyase homolog (EC 4.2.2.2) (Fragment). (Os06t0583900-01)
Sequence	GCACAGGCCGAGCAATGGAGCTCATCGTCCTACCTTCACACAGCTGAAAAAATTCCCTCA TATACAAGATAAAGGTAGGAGGAGGGCCGGGAGCTCGACGGATTTCGATCAATTGTGGTT TTTTTTTGTGGTAACCGTATAAGAGAGGAGATTTTGTTTAACGTAGCTAGATCATATCTG AGTTGAGTTTTAGCAATGGAGGTGCTGATCCGGTGGAGCAAGCTGCCGGCGGCCGGCTCC TTGGTGCTGTACGCCGTCTTCTTATTGCTGTCGGCGGCAGCCACATCGGAGGCCAACATC GGGGAGTACGATGAGTACTGGCAGAAGCGCAAGCTCATGGCTGATGCCGCCGCCGAGGCT ACCTACAAGCGTGACCCCTTCGAGGTCACCAACAGCTTCAACCGCGCCGTCCACAGATCG GAGGAGGAGAGCGGGAGGAGGGAGCTGGCGATGACGAAGAGGAAGAAGTTCGCGGGGCCG TGCAAGGCGACGAACCCGATCGACCGGTGCTGGAGGTGCCGCGCCGACTGGGTGACGGAC AGGAAGCGGCTGGCGCGGTGCGCGCAGGGGTTCGGCCGGAACACCACCGGAGGGCTGGCC GGGAAGTTCTACCTGGTGACGGACGGCACCGACGACGACGTGGAGAACCCGCGCCCGGGG ACGCTCCGGTGGGGTGTCATCCAGGACGAGCCACTGTGGATCATCTTCGCCAAGGACATG ATCATCAACCTCAAGGAGGAGATGATGATCAACAGCGACAAGACGATCGACGGGCGGGGA GCGCAGGTGCGGATCACCAATGGCGCGCAGGTGACGGTGCAGAACTCCAACAACGTGATC ATCCACAACATCCACATCCACGACATCTTGCAAGGCAAGGGCGGGATGATCCGCGACTCG CCGGAGCACTTCGGCTTCCGCACCCAGTCCGACGGCGACGGCATCAGCATCTTCGGCTCC ACCAACGTCTGGCTCGACCACCTCTCCCTCTCCAACTGCCAGGACGGCCTCATCGACGTC ATCGCCAAGTCCACCGGAGTCACCATCTCCAACTGCCACCTCACCAACCACAACGACGTC ATGCTCTTCGGCTCCAGCGACTCCTTCAGCGAGGACCAGATCATGCAGATCACCGTCGCT TTCAACCACTTCGGCCGCGGCCTCGTCCAAAGAATGCCCAGATGCCGATGGGGATTTTTC CACGTGGTGAACAACGACTACACGCACTGGCTCATGTATGCCATCGGAGGGAGCAAGAAC CCGACGATCATCAGCCAGGGGAACAGGTACATCGCGCCGCCAAACCTAGCGGCGAAGCGG ATCACGAAGCAGCTCGGGGCGACGGAGGAGGAGTGGAAGAACTGGGTGTGGCACTCTGAG GAGGACCTGTTCATGGAGGGGGCCTACTTCACCACGTCCGGTGGCCCGATCCAGAAGCAG TTCAGCAACAAGGATCTGATCAAGCCCAAGCCCGGATCCTACGTCACGAGGCTCACCCGC TTCGCTGGCTCCATCCCATGCGTGGCCGGCAAGCCGTGCTAGAGCGCGGTGGCCGGCCCC CACCGGATCCACGGCTAGCCGGAGATGATTCTTATTTTGTAGTTGTGTGAGCTTATTTTT TCTTCTACACATACGTACTTACTCAAGAAATCTTGATCTGTGGCCGGCCGGGTTCTGGTC AATGTGATCCTATAGGTTCTACATATAAAAAAGTTGTATTAATTAAAAGCATTTTTGGAA GCGGTGGCGATGCAAATTTAGAGGGCGATAGGGCGAGGAGCATGCATGTTTGTGCGTATA GGTCTACTTGTTGATGGTGATCACGAAAGAGCCAATGCATTGTCATGATAGAGGACATGC GCATTTATGCAGAAGGCCCTAGGGCAGGAATTATTTTTTTTTCATTGATTGTTTTAAATG TATTGTACTGAAACTACATTGTTGTTTCATTAACTGCACGCATCTCCAATGCAAAGTGCT AATGTAAGGTGTTTAATATATAGTGCTAATGTAAAGTGCAATGAAGCATCTCACTACTAT AGAAGATGACTTCAGTGTCGGGTCGTAACCCCTCA