Gene sequences

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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os06t0582600-01
CDS Infomation	cds chromosome:IRGSP-1.0:6:22779409:22781032:1 gene:Os06g0582600 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Cysteine proteinase. (Os06t0582600-01)
Sequence	ATGGCTATCGCGTCGTCGTCGTTTTCACTTGCTGCTATCCTCCTCATCATCATCATGTAC TGCTGCCCCACGGGTTTGGTGGAGGCAGCTCGCAAGGGGCCGGCTGCTGCCGGCGGCGGC GACGACAGCGCGATGAGGGAGAGGTACGAGAAGTGGGCGGCGGACCATGGGCGCACGTAC AAGGACTCCCTGGAGAAGGCGCGGCGATTCGAGGTATTCAGGACCAACGCCCTGTTCATC GATTCGTTTAATGCTGCAGGAGGCAAGAAGAGCCCCCGGCTGACGACCAACAAGTTCGCC GACCTGACAAACGAAGAGTTCGCGGAGTACTACGGTAGGCCGTTTAGCACGCCTGTAATT GGAGGTAGTGGCTTCATGTACGGGAACGTGAGGACCTCAGACGTGCCAGCCAACATAAAC TGGAGGGATAGAGGCGCTGTCACCCAAGTCAAGAACCAAAAGGATTGTGCGAGCTGTTGG GCGTTCTCAGCGGTGGCAGCGGTGGAAGGCATCCACCAGATCAGGAGTCACAATCTGGTT GCCCTCTCGACGCAGCAACTGTTGGACTGCTCCACCGGGAGGAACAACCATGGCTGCAAC CGCGGCGACATGGACGAAGCGTTCCGCTACATCACCAGCAACGGCGGCATCGCCGCCGAG TCAGACTACCCCTACGAAGACCGCGCGCTGGGCACCTGCCGCGCCTCAGGGAAACCGGTG GCGGCCTCCATCAGAGGCTTCCAGTATGTCCCTCCGAACAACGAGACCGCCCTCCTGCTG GCCGTCGCCCACCAGCCTGTGTCCGTGGCACTCGACGGCGTGGGCAAGGTGTCCCAGTTC TTCAGCAGCGGAGTGTTTGGCGCGATGCAAAATGAGACGTGCACCACTGACCTCAACCAT GCCATGACGGCGGTGGGGTACGGCACCGACGAGCACGGCACCAAGTACTGGCTAATGAAG AACTCGTGGGGAACCGACTGGGGCGAGGGAGGATATATGAAGATCGCGCGGGATGTCGCG TCCAACACCGGCCTTTGCGGCCTCGCCATGCAACCCTCTTACCCCGTTGCCTAA

Peptide Sequence

PEP ID	Os06t0582600-01
PEP Infomation	pep chromosome:IRGSP-1.0:6:22779409:22781032:1 gene:Os06g0582600 transcript:Os06t0582600-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Cysteine proteinase. (Os06t0582600-01)
Sequence	MAIASSSFSLAAILLIIIMYCCPTGLVEAARKGPAAAGGGDDSAMRERYEKWAADHGRTY KDSLEKARRFEVFRTNALFIDSFNAAGGKKSPRLTTNKFADLTNEEFAEYYGRPFSTPVI GGSGFMYGNVRTSDVPANINWRDRGAVTQVKNQKDCASCWAFSAVAAVEGIHQIRSHNLV ALSTQQLLDCSTGRNNHGCNRGDMDEAFRYITSNGGIAAESDYPYEDRALGTCRASGKPV AASIRGFQYVPPNNETALLLAVAHQPVSVALDGVGKVSQFFSSGVFGAMQNETCTTDLNH AMTAVGYGTDEHGTKYWLMKNSWGTDWGEGGYMKIARDVASNTGLCGLAMQPSYPVA

Transcript Sequence

Transcript ID	Os06t0582600-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:6:22779409:22781032:1 gene:Os06g0582600 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Cysteine proteinase. (Os06t0582600-01)
Sequence	GAGGACAATGAGCAAGTGAGCAACTGGCTAGGTTACCTGGTTAGCTAGTAACAACTCAAA CATTGTAAGCGCATAGAGGAGTCTGGTGCTCTACTCAACTCTGAAACAATCAACTGCACC AGTGTACTAATTAAATATATTACTGTACTTAAGACATGGCTATCGCGTCGTCGTCGTTTT CACTTGCTGCTATCCTCCTCATCATCATCATGTACTGCTGCCCCACGGGTTTGGTGGAGG CAGCTCGCAAGGGGCCGGCTGCTGCCGGCGGCGGCGACGACAGCGCGATGAGGGAGAGGT ACGAGAAGTGGGCGGCGGACCATGGGCGCACGTACAAGGACTCCCTGGAGAAGGCGCGGC GATTCGAGGTATTCAGGACCAACGCCCTGTTCATCGATTCGTTTAATGCTGCAGGAGGCA AGAAGAGCCCCCGGCTGACGACCAACAAGTTCGCCGACCTGACAAACGAAGAGTTCGCGG AGTACTACGGTAGGCCGTTTAGCACGCCTGTAATTGGAGGTAGTGGCTTCATGTACGGGA ACGTGAGGACCTCAGACGTGCCAGCCAACATAAACTGGAGGGATAGAGGCGCTGTCACCC AAGTCAAGAACCAAAAGGATTGTGCGAGCTGTTGGGCGTTCTCAGCGGTGGCAGCGGTGG AAGGCATCCACCAGATCAGGAGTCACAATCTGGTTGCCCTCTCGACGCAGCAACTGTTGG ACTGCTCCACCGGGAGGAACAACCATGGCTGCAACCGCGGCGACATGGACGAAGCGTTCC GCTACATCACCAGCAACGGCGGCATCGCCGCCGAGTCAGACTACCCCTACGAAGACCGCG CGCTGGGCACCTGCCGCGCCTCAGGGAAACCGGTGGCGGCCTCCATCAGAGGCTTCCAGT ATGTCCCTCCGAACAACGAGACCGCCCTCCTGCTGGCCGTCGCCCACCAGCCTGTGTCCG TGGCACTCGACGGCGTGGGCAAGGTGTCCCAGTTCTTCAGCAGCGGAGTGTTTGGCGCGA TGCAAAATGAGACGTGCACCACTGACCTCAACCATGCCATGACGGCGGTGGGGTACGGCA CCGACGAGCACGGCACCAAGTACTGGCTAATGAAGAACTCGTGGGGAACCGACTGGGGCG AGGGAGGATATATGAAGATCGCGCGGGATGTCGCGTCCAACACCGGCCTTTGCGGCCTCG CCATGCAACCCTCTTACCCCGTTGCCTAATAAACTAAAGAGACATAAATTGAGCCGATAA CCGTGTTAGCGTCTGGTGAAAAAGTAGTACGGCGTGGTGTAATATGCGATTCATGTGATA AATTATTATCAGTGTTTGTTATATTTTACTATGCCGTTTTCATG