Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os06t0581500-01
CDS Infomation	cds chromosome:IRGSP-1.0:6:22710845:22714666:-1 gene:Os06g0581500 gene_biotype:protein_coding transcript_biotype:protein_coding description:Protein kinase, core domain containing protein. (Os06t0581500-01)
Sequence	ATGATTCCTATAGGAACTCTCACTCCCTCACTTCTCACTTTTGCTGTCCTGTATGCTTTC TTGACCCTCCCATTAATTCCGTCACTAAGTAGCACCGCACTCGATGATGAATCCAACAAG GATCTCCAGGCCCTCCTTTGTCTCAAGTCTCGTCTCTCTAACAATGCAAGATCCCTAGCC TCATGGAACGAGTCTCTCCAATTTTGCACTTGGCCCGGTATCACCTGCGGAAAGAGACAT GAATCTCGTGTCACAGCACTGCACCTAGAGTCCTTAGACCTCAATGGCCATTTACCCCCC TGTATTGGCAATCTCACTTTCCTCACACGAATTCACCTATCGAATAATAGGTTGAATGGT GAGATCCCAATTGAAGTAGGCCACCTACGCCGTCTAGTTTACATAAACCTTTCTTCAAAC AATCTTACTGGTGTGATACCAAACTCTCTATCTTCTTGCTCTAGCCTTGAAATACTTAAT CTTGGGAACAACTTCCTCCAAGGGGAGATACCCCTTGGTCTGAGCAACTGTTCAAATCTC AAAAGAATCGTCCTCCATGAAAACATGCTTCACGGTGGCATTCCTGATGGGTTCACCGCG CTCGACAAACTTTCGGTTTTGTTTGCCCATAGCAACAACTTGTCAGGTAACATTCCTCAT TCACTTGGAAGCGTCTCGTCACTCACCTATGTCGTTCTCGCAAACAATAGTCTTACTGGA GGTATACCCCCTGTGCTAGCAAATTGTTCATCACTTCAGTGGCTTGACTTAAGGAAGAAT CACATCGGTGGAGAGATACCACCCGCTCTATTCAATAGCTCCTCACTACAGGCCATAAAT TTGGCAGAAAACAACTTTTTTGGGTCCATTCCACCTTTGTCAGACCTCTCATCAATTCAA TTTCTTTATCTGTCCTACAATAATCTCTCAGGTAGCATACCATCTTCTCTAGGCAACTCC ACTTCACTTTACTCACTTCTGCTTGCATGGAATGAATTGCAAGGAAGTATTCCATCGAGT TTAAGTAGAATTCCGTACTTAGAAGAACTGGAATTCACTGGGAACAACTTGACAGGAACA GTTCCACTCCCTCTCTACAATATGTCAACACTCACATTCCTTGGCATGGCAGAAAATAAT CTGATAGGAGAATTACCACAAAATATTGGGTATACTCTTAAAAGCATCGAAATGTTCATT CTGCAAGGAAACAAATTCCATGGTCAAATTCCCAAATCATTGGCCAAAGCAACAAATCTT CAATTGATTAATCTCAGAGAAAATGCATTCAAAGGTATTATTCCTTATTTTGGGTCCTTA CCCAACTTGACCATTCTCGATCTAGGTAAGAACCAGCTTGAAGCTGGAGATTGGACTTTC CTCCCAGCATTAGCACATACACAGCTGGCCGAATTATATTTAGATGCAAATAACCTTCAA GGAAGCCTGCCAAGTTCCACTGGTGATCTTCCACAAAGCATGAAAATATTAGTTTTGACA TCCAATTTCATCTCTGGCACCATACCACAGGAGATAGAACAACTCAGAAACCTCGTACTG CTTCAAATTGACCATAATTTGCTGACAGGCAACCTTCCTGACTCACTTGGAAATCTTTCA AACTTACTCATTCTAAGCTTAGCACAAAACAGTTTTTATGGGAAAATCCCACTTTCAATT GGTAAACTAAATCAGTTAACTGAGCTTTACCTGCAAGATAACTCTTTCAGTGGACTCATC CCCAAGGCCTTAGGACAATGCCAAAAACTAGATATACTAAATCTTTCTTGTAACTCCTTG GAAGGAACAATACCAAAGGAATTATTTACTATTTCCACACTTTCTGAAGGTCTGGACCTC TCACACAACAGACTCTCTGGACCTATACCAGTGGAAGTTGGTAGTTTGATTAATCTTGGC CCCCTCAATATTTCAAACAACAAATTGTCAGGAGAAATTCCCTCAGCTCTAGGTGATTGT GTCCGTCTTGAGTATCTCAACATGGAGGGGAATGTTCTTAATGGGCAAATTCCTAAATCT TTTTCTGCACTGAGAGGCATCATTCAGATGGATCTTTCTCGGAACAACTTATCTGGTCAA ATTCCAGAGTTTTTTGAGACTCTGAGCTCTATGGTGCTTCTTAATTTGTCATTCAACAAC CTAGAGGGACCCATACCATCCAATGGGATCTTCCAAAATGCAAGCAAGGTTTTTCTCCAA GGGAACAAGGAGTTGTGTGCCATCTCACCACTACTGAAATTGCCACTTTGTCAGATATCT GCTTCTAAAAACAACCACACTTCCTATATTGCAAAGGTAGTAGGGCTCAGCGTTTTCTGT TTGGTATTTTTGTCATGTTTAGCAGTGTTTTTTCTGAAGAGAAAAAAAGCTAAAAATCCA ACAGACCCATCATATAAGAAATTGGAGAAACTCACATATGCTGATTTAGTCAAAGTAACG AACAACTTTTCTCCAACCAACTTAATTGGTTCGGGGAAATATGGATCAGTATATGTTGGT AAATTTGACGCCGAAGCACATGCAGTTGCTATCAAAGTTTTCAAACTTGATCAACTTGGA GCACCAAAAAGCTTCATAGCAGAGTGTGAGGCCTTGAGGAACACCCGCCATCGCAATCTC GTAAGGGTGATCACCGCATGCTCAACATTTGATCCGACAGGACATGAGTTCAAAGCTCTT GTTCTTGAATACATGGTTAATGGCAACCTAGAATGTTGGCTGCATCCAACATCCTACAAG AATCGTCCGAGGAATCCAGTGAGGTTATCTACAAGAATAGAAATAGCATTGGACATGGCT GCTGCTTTGGATTATCTCCATAACCGTTGCATGCCACCTATTGTCCATTGTGATCTGAAG CCAAGCAATGTCCTTCTGGATAATGCCATGGGTGCACGTGTTAGCGACTTTGGATTAGCT AAGTTCCTTCACAGCAATATTTCTTCGACAAGTGATAGGTCTACAAGCTTACTGGGGCCA AGAGGGTCTATTGGATACATTGCACCAGAATATGGCTTCGGGAGTAAAATATCAACAGAG GGTGATGTTTACAGCTATGGGGTTATCATCTTAGAAATGTTGACAGGGAAGCGTCCAACA GATGAGATGTTTAATGATGGCTTGAACCTTCACCAATTTGCCAAGGAGGCATTTCCTCTG AAGATTGGTCAAATTCTAGATCCGAGCATCATGCCAGATTATGAGAACGAAGACAATGAT GCAAACAATGATCTAGACCATGATAATTGTTTGATGGATGGAATGCTGAACTGTGTCACG AAGCTGGTTAAGCTTGGCCTCTTGTGCTCTGCAGTGGCACCTAAAGATCGGCCGACAATG CAAAGCGTTTACAAGGAAGTCGCTGCAATCAAAGAAGAATTTTCAGCACTGCATGGTTAA

Peptide Sequence

PEP ID	Os06t0581500-01
PEP Infomation	pep chromosome:IRGSP-1.0:6:22710845:22714666:-1 gene:Os06g0581500 transcript:Os06t0581500-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Protein kinase, core domain containing protein. (Os06t0581500-01)
Sequence	MIPIGTLTPSLLTFAVLYAFLTLPLIPSLSSTALDDESNKDLQALLCLKSRLSNNARSLA SWNESLQFCTWPGITCGKRHESRVTALHLESLDLNGHLPPCIGNLTFLTRIHLSNNRLNG EIPIEVGHLRRLVYINLSSNNLTGVIPNSLSSCSSLEILNLGNNFLQGEIPLGLSNCSNL KRIVLHENMLHGGIPDGFTALDKLSVLFAHSNNLSGNIPHSLGSVSSLTYVVLANNSLTG GIPPVLANCSSLQWLDLRKNHIGGEIPPALFNSSSLQAINLAENNFFGSIPPLSDLSSIQ FLYLSYNNLSGSIPSSLGNSTSLYSLLLAWNELQGSIPSSLSRIPYLEELEFTGNNLTGT VPLPLYNMSTLTFLGMAENNLIGELPQNIGYTLKSIEMFILQGNKFHGQIPKSLAKATNL QLINLRENAFKGIIPYFGSLPNLTILDLGKNQLEAGDWTFLPALAHTQLAELYLDANNLQ GSLPSSTGDLPQSMKILVLTSNFISGTIPQEIEQLRNLVLLQIDHNLLTGNLPDSLGNLS NLLILSLAQNSFYGKIPLSIGKLNQLTELYLQDNSFSGLIPKALGQCQKLDILNLSCNSL EGTIPKELFTISTLSEGLDLSHNRLSGPIPVEVGSLINLGPLNISNNKLSGEIPSALGDC VRLEYLNMEGNVLNGQIPKSFSALRGIIQMDLSRNNLSGQIPEFFETLSSMVLLNLSFNN LEGPIPSNGIFQNASKVFLQGNKELCAISPLLKLPLCQISASKNNHTSYIAKVVGLSVFC LVFLSCLAVFFLKRKKAKNPTDPSYKKLEKLTYADLVKVTNNFSPTNLIGSGKYGSVYVG KFDAEAHAVAIKVFKLDQLGAPKSFIAECEALRNTRHRNLVRVITACSTFDPTGHEFKAL VLEYMVNGNLECWLHPTSYKNRPRNPVRLSTRIEIALDMAAALDYLHNRCMPPIVHCDLK PSNVLLDNAMGARVSDFGLAKFLHSNISSTSDRSTSLLGPRGSIGYIAPEYGFGSKISTE GDVYSYGVIILEMLTGKRPTDEMFNDGLNLHQFAKEAFPLKIGQILDPSIMPDYENEDND ANNDLDHDNCLMDGMLNCVTKLVKLGLLCSAVAPKDRPTMQSVYKEVAAIKEEFSALHG

Transcript Sequence

Transcript ID	Os06t0581500-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:6:22710845:22714666:-1 gene:Os06g0581500 gene_biotype:protein_coding transcript_biotype:protein_coding description:Protein kinase, core domain containing protein. (Os06t0581500-01)
Sequence	ACAACCCAAGCTACAGCTAGTCTTCCACAAACATAACAGCAACAACATCCATAGTAGCGG ATAGATGATTCCTATAGGAACTCTCACTCCCTCACTTCTCACTTTTGCTGTCCTGTATGC TTTCTTGACCCTCCCATTAATTCCGTCACTAAGTAGCACCGCACTCGATGATGAATCCAA CAAGGATCTCCAGGCCCTCCTTTGTCTCAAGTCTCGTCTCTCTAACAATGCAAGATCCCT AGCCTCATGGAACGAGTCTCTCCAATTTTGCACTTGGCCCGGTATCACCTGCGGAAAGAG ACATGAATCTCGTGTCACAGCACTGCACCTAGAGTCCTTAGACCTCAATGGCCATTTACC CCCCTGTATTGGCAATCTCACTTTCCTCACACGAATTCACCTATCGAATAATAGGTTGAA TGGTGAGATCCCAATTGAAGTAGGCCACCTACGCCGTCTAGTTTACATAAACCTTTCTTC AAACAATCTTACTGGTGTGATACCAAACTCTCTATCTTCTTGCTCTAGCCTTGAAATACT TAATCTTGGGAACAACTTCCTCCAAGGGGAGATACCCCTTGGTCTGAGCAACTGTTCAAA TCTCAAAAGAATCGTCCTCCATGAAAACATGCTTCACGGTGGCATTCCTGATGGGTTCAC CGCGCTCGACAAACTTTCGGTTTTGTTTGCCCATAGCAACAACTTGTCAGGTAACATTCC TCATTCACTTGGAAGCGTCTCGTCACTCACCTATGTCGTTCTCGCAAACAATAGTCTTAC TGGAGGTATACCCCCTGTGCTAGCAAATTGTTCATCACTTCAGTGGCTTGACTTAAGGAA GAATCACATCGGTGGAGAGATACCACCCGCTCTATTCAATAGCTCCTCACTACAGGCCAT AAATTTGGCAGAAAACAACTTTTTTGGGTCCATTCCACCTTTGTCAGACCTCTCATCAAT TCAATTTCTTTATCTGTCCTACAATAATCTCTCAGGTAGCATACCATCTTCTCTAGGCAA CTCCACTTCACTTTACTCACTTCTGCTTGCATGGAATGAATTGCAAGGAAGTATTCCATC GAGTTTAAGTAGAATTCCGTACTTAGAAGAACTGGAATTCACTGGGAACAACTTGACAGG AACAGTTCCACTCCCTCTCTACAATATGTCAACACTCACATTCCTTGGCATGGCAGAAAA TAATCTGATAGGAGAATTACCACAAAATATTGGGTATACTCTTAAAAGCATCGAAATGTT CATTCTGCAAGGAAACAAATTCCATGGTCAAATTCCCAAATCATTGGCCAAAGCAACAAA TCTTCAATTGATTAATCTCAGAGAAAATGCATTCAAAGGTATTATTCCTTATTTTGGGTC CTTACCCAACTTGACCATTCTCGATCTAGGTAAGAACCAGCTTGAAGCTGGAGATTGGAC TTTCCTCCCAGCATTAGCACATACACAGCTGGCCGAATTATATTTAGATGCAAATAACCT TCAAGGAAGCCTGCCAAGTTCCACTGGTGATCTTCCACAAAGCATGAAAATATTAGTTTT GACATCCAATTTCATCTCTGGCACCATACCACAGGAGATAGAACAACTCAGAAACCTCGT ACTGCTTCAAATTGACCATAATTTGCTGACAGGCAACCTTCCTGACTCACTTGGAAATCT TTCAAACTTACTCATTCTAAGCTTAGCACAAAACAGTTTTTATGGGAAAATCCCACTTTC AATTGGTAAACTAAATCAGTTAACTGAGCTTTACCTGCAAGATAACTCTTTCAGTGGACT CATCCCCAAGGCCTTAGGACAATGCCAAAAACTAGATATACTAAATCTTTCTTGTAACTC CTTGGAAGGAACAATACCAAAGGAATTATTTACTATTTCCACACTTTCTGAAGGTCTGGA CCTCTCACACAACAGACTCTCTGGACCTATACCAGTGGAAGTTGGTAGTTTGATTAATCT TGGCCCCCTCAATATTTCAAACAACAAATTGTCAGGAGAAATTCCCTCAGCTCTAGGTGA TTGTGTCCGTCTTGAGTATCTCAACATGGAGGGGAATGTTCTTAATGGGCAAATTCCTAA ATCTTTTTCTGCACTGAGAGGCATCATTCAGATGGATCTTTCTCGGAACAACTTATCTGG TCAAATTCCAGAGTTTTTTGAGACTCTGAGCTCTATGGTGCTTCTTAATTTGTCATTCAA CAACCTAGAGGGACCCATACCATCCAATGGGATCTTCCAAAATGCAAGCAAGGTTTTTCT CCAAGGGAACAAGGAGTTGTGTGCCATCTCACCACTACTGAAATTGCCACTTTGTCAGAT ATCTGCTTCTAAAAACAACCACACTTCCTATATTGCAAAGGTAGTAGGGCTCAGCGTTTT CTGTTTGGTATTTTTGTCATGTTTAGCAGTGTTTTTTCTGAAGAGAAAAAAAGCTAAAAA TCCAACAGACCCATCATATAAGAAATTGGAGAAACTCACATATGCTGATTTAGTCAAAGT AACGAACAACTTTTCTCCAACCAACTTAATTGGTTCGGGGAAATATGGATCAGTATATGT TGGTAAATTTGACGCCGAAGCACATGCAGTTGCTATCAAAGTTTTCAAACTTGATCAACT TGGAGCACCAAAAAGCTTCATAGCAGAGTGTGAGGCCTTGAGGAACACCCGCCATCGCAA TCTCGTAAGGGTGATCACCGCATGCTCAACATTTGATCCGACAGGACATGAGTTCAAAGC TCTTGTTCTTGAATACATGGTTAATGGCAACCTAGAATGTTGGCTGCATCCAACATCCTA CAAGAATCGTCCGAGGAATCCAGTGAGGTTATCTACAAGAATAGAAATAGCATTGGACAT GGCTGCTGCTTTGGATTATCTCCATAACCGTTGCATGCCACCTATTGTCCATTGTGATCT GAAGCCAAGCAATGTCCTTCTGGATAATGCCATGGGTGCACGTGTTAGCGACTTTGGATT AGCTAAGTTCCTTCACAGCAATATTTCTTCGACAAGTGATAGGTCTACAAGCTTACTGGG GCCAAGAGGGTCTATTGGATACATTGCACCAGAATATGGCTTCGGGAGTAAAATATCAAC AGAGGGTGATGTTTACAGCTATGGGGTTATCATCTTAGAAATGTTGACAGGGAAGCGTCC AACAGATGAGATGTTTAATGATGGCTTGAACCTTCACCAATTTGCCAAGGAGGCATTTCC TCTGAAGATTGGTCAAATTCTAGATCCGAGCATCATGCCAGATTATGAGAACGAAGACAA TGATGCAAACAATGATCTAGACCATGATAATTGTTTGATGGATGGAATGCTGAACTGTGT CACGAAGCTGGTTAAGCTTGGCCTCTTGTGCTCTGCAGTGGCACCTAAAGATCGGCCGAC AATGCAAAGCGTTTACAAGGAAGTCGCTGCAATCAAAGAAGAATTTTCAGCACTGCATGG TTAAGCCAAAGGATTATTTCTTTTATGTCGCACATGCTACTAGTACATTTTTCTTGTTTG AGCTTGTGATATGTCATTTTCTCCTCTTCAGTCTTACTAGTGAATATTTATGTGTGTAAT AATGTCTGATAACTATGCCAGTTTGTAACAAATAATTAAAATTCAGTATTGAGCTC