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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os06t0581300-02
CDS Infomation

cds chromosome:IRGSP-1.0:6:22699280:22704976:1 gene:Os06g0581300 gene_biotype:protein_coding transcript_biotype:protein_coding description:Hypothetical conserved gene. (Os06t0581300-01);Protein of unknown function DUF1475 family protein. (Os06t0581300-02)
Sequence

ATGGCGGCGGCGGGATCCATAGGCGTGTACAGGGCGGTGTTCGCGGCGCTGGGCGCTCTC
ATGCTGGGCACCCTGGTGTACACCTGCGTCACCGACGGCTCGCCGTTTCGCCTCGAGCTG
CTCACCCCGTGGTTGGTGGCAACACTGATTGATTTTTATGTCAATGTGACTGCGATTTCG
ACTTGGGTTATCTACAAGGAAGTAAATTGGATTAGTTCTTTCTTTTGGGTAGTTCTGTTG
TACTGTTTTGGCAGTATTGCTACATGTGCTTATGTTGTTGTGAAGCTTTTTGAAATAAAA
ACTTCCGGACCTTCACAAGATCCACTTGATCTTTTATTCCTCAGGCAAGGAGATCTATCC
GAAAGAAAGTCCTCTTTTGTCATAATTGGGAGAATTATTTTCAGCATTTTGGGGGCAATG
ATGGCTGCAGTCGTAATTTATACTGTCATCACTGATGGACTACCTTTCAGGAAGGACTTG
TTGACCCCGTGGATGGCGGCAACCTTAATTGACTTCTATATAAATGTCTTCGCAATATCG
GTATGGGTTGCTCACAAGGAGTCAAACTGGATATCTACTGCCATCTGGATATGCTTGTTA
ATATGCTTTGGAAGCATCACGACATGTGGCTACATTGTCATACAACTTTTCCAAGTGTCG
TACCGAGACCCAATCTATCATGTGCTATTGAACTCTCATAACAAGAGCCTCAACGCAGAG
CAGGGAAGACTTCCAAGCATTATACCCCCTAGCTCTGCCAAAGTATGA

Peptide Sequence

PEP ID

Os06t0581300-02
PEP Infomation

pep chromosome:IRGSP-1.0:6:22699280:22704976:1 gene:Os06g0581300 transcript:Os06t0581300-02 gene_biotype:protein_coding transcript_biotype:protein_coding description:Hypothetical conserved gene. (Os06t0581300-01);Protein of unknown function DUF1475 family protein. (Os06t0581300-02)
Sequence

MAAAGSIGVYRAVFAALGALMLGTLVYTCVTDGSPFRLELLTPWLVATLIDFYVNVTAIS
TWVIYKEVNWISSFFWVVLLYCFGSIATCAYVVVKLFEIKTSGPSQDPLDLLFLRQGDLS
ERKSSFVIIGRIIFSILGAMMAAVVIYTVITDGLPFRKDLLTPWMAATLIDFYINVFAIS
VWVAHKESNWISTAIWICLLICFGSITTCGYIVIQLFQVSYRDPIYHVLLNSHNKSLNAE
QGRLPSIIPPSSAKV

Transcript Sequence

Transcript ID

Os06t0581300-02
Transcript Infomation

cdna chromosome:IRGSP-1.0:6:22699280:22704976:1 gene:Os06g0581300 gene_biotype:protein_coding transcript_biotype:protein_coding description:Hypothetical conserved gene. (Os06t0581300-01);Protein of unknown function DUF1475 family protein. (Os06t0581300-02)
Sequence

TTTCGTCTCGCGGTGAGTTTTTGGTAGTTTAGTTTGATACACCACTTCGTTTGATACCCT
CGGCGACCGCGCGGCGGCCAGCGGGCGCATCCATGGCGGCGGCGGGATCCATAGGCGTGT
ACAGGGCGGTGTTCGCGGCGCTGGGCGCTCTCATGCTGGGCACCCTGGTGTACACCTGCG
TCACCGACGGCTCGCCGTTTCGCCTCGAGCTGCTCACCCCGTGGTTGGTGGCAACACTGA
TTGATTTTTATGTCAATGTGACTGCGATTTCGACTTGGGTTATCTACAAGGAAGTAAATT
GGATTAGTTCTTTCTTTTGGGTAGTTCTGTTGTACTGTTTTGGCAGTATTGCTACATGTG
CTTATGTTGTTGTGAAGCTTTTTGAAATAAAAACTTCCGGACCTTCACAAGATCCACTTG
ATCTTTTATTCCTCAGGCAAGGAGATCTATCCGAAAGAAAGTCCTCTTTTGTCATAATTG
GGAGAATTATTTTCAGCATTTTGGGGGCAATGATGGCTGCAGTCGTAATTTATACTGTCA
TCACTGATGGACTACCTTTCAGGAAGGACTTGTTGACCCCGTGGATGGCGGCAACCTTAA
TTGACTTCTATATAAATGTCTTCGCAATATCGGTATGGGTTGCTCACAAGGAGTCAAACT
GGATATCTACTGCCATCTGGATATGCTTGTTAATATGCTTTGGAAGCATCACGACATGTG
GCTACATTGTCATACAACTTTTCCAAGTGTCGTACCGAGACCCAATCTATCATGTGCTAT
TGAACTCTCATAACAAGAGCCTCAACGCAGAGCAGGGAAGACTTCCAAGCATTATACCCC
CTAGCTCTGCCAAAGTATGAAGAATATGTAAGCCATCTTTTGCCAGTTCTTTTGCAGACA
GAATTCCAATATGCAGGGATTCAGATCATTCTCATTTTGTTCTTTCTGTTGGAGTTAGAA
AAATCTTTGCTTCGGCATACTCTCAAATATAATAGCTTTGAATTCTGGACCCCTGG