Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os06t0581000-01
CDS Infomation	cds chromosome:IRGSP-1.0:6:22655734:22664963:-1 gene:Os06g0581000 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:nitrate transporter 1.2 description:Similar to Nitrate transporter NTL1. (Os06t0581000-01)
Sequence	ATGGAGGACGGTGCGGCGGCGCGGGAGGCGGAGAGGTGGGAGGGGTACGTCGACTGGAGG AACCGGCCGGCGGTGCGCGGCCGGCACGGCGGCATGCTCGCCGCCTCCTTCGTTCTTGTG GTGGAGGTGCTCGAGAACCTGGCGTTCCTGGCGAACGCGAGCAACCTGGTGACCTACCTG ATGAATTTCATGCACTACTCGCCGTCGCAGTCGGCGACGACGGTGACCAACTTCATGGGC ACCGCCTTCCTCCTCGCCCTCCTTGGCGGCTTCCTCTCCGACGCCTTCTTCACCACCTAC GCCATCTACCTCATCAGCGCCTTTGTGGAATTCCTGGGGCTGGTGGTCCTGACGATCCAG GCGAGGACGCCGTCGCTGATGCCGCCGGGGTGCGCCAAGGTTGCCGGCGCGGCGTGCGAG CCAGTGTCGGGGCCGAAGAAGGCAATGCTGTTCGCGGGGCTGTACGTGACGGCGCTGGGC ATCGGCGGCATCAAGGGCTCCCTCCCGTCGCACGGCGCCGAGCAGTTCGACGAGCACGCG CCGCGGGGGCGGAAGGGGCGCTCCACCTTCTTCAACTACTTCGTCTTCTGCCTCTCCGTC GGCGCGCTCATCGCCGTCACGTTCGCCGTCTGGGTGGAGGACAACAAGGGGTGGCAGTGG GGGTTCGGCATCTCCACCATCGCCATCCTGCTCTCCATCCCGGTGTTCGTCGCCGGCTCG AGGCTGTACCGCAACAAGGTGCCCACGGGGAGCCCGCTCACCACCATCGCCAAGGTCGTC CTCGCCGCCGCGCTCGCTCGCCGCGGCGGCGCGCAGAGCGCCAGCAACGGCGCTGTCATC GACCGCGCGCCCAGCCCCACGGGGAGCACGGACATGAAGGAGTACTGCAAGCCCGGCGAC ATCTGCGGCGTCGCCGACGGCGCCGCCGAGGTGGCTACCGAGCCGTCGCAGGAGCTGGTG TTCCTGAACCGGGCGGTGCAGCGGCAGCCGCGGTGCGGGGCGCTGTCGTGCACGGTGCAG GAGGTGGAGGACGTCAAGATCGTGCTCATGGTGCTCCCGATCTTCTTCTCCACCATCATG CTCAACAGCTGCCTGGCGCAGCTGTCCACCTTCTCCGTGGAGCAGGCGGCGACGATGGAC ACCCGCGTCGGGGGGCTCAAGGTGCCGCCGGCGTCGCTGCCGGTGTTCCCGGTCACCTTC ATCATCCTCCTCGCCCCGGTCTACGACCACATCATCATCCCGTTCGCGCGACGCGCCACG GGCACGGAGATGGGGATCACCCACCTGCAGCGCATCGGCACGGGGCTCGTCCTCTCCATC GTCGCCATGGCCGTCGCCGCCGTGGTGGAGGTGAAGCGCAAGAACGTGGCGTCCAACGCC GGAATGCTCGACGCGGCGGCGCCGCTGCCCATCACCTTCTTCTGGATCGCGTTCCAGTAC CTGTTCCTGGGGTCCGCCGACCTGTTCACGCTGGCGGGGCTGCTCGAGTTCTTCTTCAGC GAGGCGCCGGCGAGGATGCGGTCGCTGGCGACGTCGCTGTCGTGGGCGTCGCTGGCGCTG GGGTACTACCTGAGCTCGGTGCTGGTGACGGTGGTGAACAGCGCGACGGGGCGCGGCGGG CGGCGGGCGTGGCTGCAGGGGGAGAACCTGAACCACTACCACCTGGAGAGGTTCTACTGG GTGATGTGTGTGCTCAGCACGCTCAACTACCTCTTCTTCTTGTTCTGGGCCATCCGGTAC AAGTACAGAAACGCCGGGGTCATCAAGGGATGA

Peptide Sequence

PEP ID	Os06t0581000-01
PEP Infomation	pep chromosome:IRGSP-1.0:6:22655734:22664963:-1 gene:Os06g0581000 transcript:Os06t0581000-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:nitrate transporter 1.2 description:Similar to Nitrate transporter NTL1. (Os06t0581000-01)
Sequence	MEDGAAAREAERWEGYVDWRNRPAVRGRHGGMLAASFVLVVEVLENLAFLANASNLVTYL MNFMHYSPSQSATTVTNFMGTAFLLALLGGFLSDAFFTTYAIYLISAFVEFLGLVVLTIQ ARTPSLMPPGCAKVAGAACEPVSGPKKAMLFAGLYVTALGIGGIKGSLPSHGAEQFDEHA PRGRKGRSTFFNYFVFCLSVGALIAVTFAVWVEDNKGWQWGFGISTIAILLSIPVFVAGS RLYRNKVPTGSPLTTIAKVVLAAALARRGGAQSASNGAVIDRAPSPTGSTDMKEYCKPGD ICGVADGAAEVATEPSQELVFLNRAVQRQPRCGALSCTVQEVEDVKIVLMVLPIFFSTIM LNSCLAQLSTFSVEQAATMDTRVGGLKVPPASLPVFPVTFIILLAPVYDHIIIPFARRAT GTEMGITHLQRIGTGLVLSIVAMAVAAVVEVKRKNVASNAGMLDAAAPLPITFFWIAFQY LFLGSADLFTLAGLLEFFFSEAPARMRSLATSLSWASLALGYYLSSVLVTVVNSATGRGG RRAWLQGENLNHYHLERFYWVMCVLSTLNYLFFLFWAIRYKYRNAGVIKG

Transcript Sequence

Transcript ID	Os06t0581000-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:6:22655734:22664963:-1 gene:Os06g0581000 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:nitrate transporter 1.2 description:Similar to Nitrate transporter NTL1. (Os06t0581000-01)
Sequence	GGCACAGAGACTCCTCGCCTCTGCTCCGCTGCTGCTTCCCTGTTCACCCGCCATTAGCGC GACCGAGCTCGCTCGCTCCCGGTGCAAGTTGCACCGCCTACCGGCGGCGGCCATGGAGGA CGGTGCGGCGGCGCGGGAGGCGGAGAGGTGGGAGGGGTACGTCGACTGGAGGAACCGGCC GGCGGTGCGCGGCCGGCACGGCGGCATGCTCGCCGCCTCCTTCGTTCTTGTGGTGGAGGT GCTCGAGAACCTGGCGTTCCTGGCGAACGCGAGCAACCTGGTGACCTACCTGATGAATTT CATGCACTACTCGCCGTCGCAGTCGGCGACGACGGTGACCAACTTCATGGGCACCGCCTT CCTCCTCGCCCTCCTTGGCGGCTTCCTCTCCGACGCCTTCTTCACCACCTACGCCATCTA CCTCATCAGCGCCTTTGTGGAATTCCTGGGGCTGGTGGTCCTGACGATCCAGGCGAGGAC GCCGTCGCTGATGCCGCCGGGGTGCGCCAAGGTTGCCGGCGCGGCGTGCGAGCCAGTGTC GGGGCCGAAGAAGGCAATGCTGTTCGCGGGGCTGTACGTGACGGCGCTGGGCATCGGCGG CATCAAGGGCTCCCTCCCGTCGCACGGCGCCGAGCAGTTCGACGAGCACGCGCCGCGGGG GCGGAAGGGGCGCTCCACCTTCTTCAACTACTTCGTCTTCTGCCTCTCCGTCGGCGCGCT CATCGCCGTCACGTTCGCCGTCTGGGTGGAGGACAACAAGGGGTGGCAGTGGGGGTTCGG CATCTCCACCATCGCCATCCTGCTCTCCATCCCGGTGTTCGTCGCCGGCTCGAGGCTGTA CCGCAACAAGGTGCCCACGGGGAGCCCGCTCACCACCATCGCCAAGGTCGTCCTCGCCGC CGCGCTCGCTCGCCGCGGCGGCGCGCAGAGCGCCAGCAACGGCGCTGTCATCGACCGCGC GCCCAGCCCCACGGGGAGCACGGACATGAAGGAGTACTGCAAGCCCGGCGACATCTGCGG CGTCGCCGACGGCGCCGCCGAGGTGGCTACCGAGCCGTCGCAGGAGCTGGTGTTCCTGAA CCGGGCGGTGCAGCGGCAGCCGCGGTGCGGGGCGCTGTCGTGCACGGTGCAGGAGGTGGA GGACGTCAAGATCGTGCTCATGGTGCTCCCGATCTTCTTCTCCACCATCATGCTCAACAG CTGCCTGGCGCAGCTGTCCACCTTCTCCGTGGAGCAGGCGGCGACGATGGACACCCGCGT CGGGGGGCTCAAGGTGCCGCCGGCGTCGCTGCCGGTGTTCCCGGTCACCTTCATCATCCT CCTCGCCCCGGTCTACGACCACATCATCATCCCGTTCGCGCGACGCGCCACGGGCACGGA GATGGGGATCACCCACCTGCAGCGCATCGGCACGGGGCTCGTCCTCTCCATCGTCGCCAT GGCCGTCGCCGCCGTGGTGGAGGTGAAGCGCAAGAACGTGGCGTCCAACGCCGGAATGCT CGACGCGGCGGCGCCGCTGCCCATCACCTTCTTCTGGATCGCGTTCCAGTACCTGTTCCT GGGGTCCGCCGACCTGTTCACGCTGGCGGGGCTGCTCGAGTTCTTCTTCAGCGAGGCGCC GGCGAGGATGCGGTCGCTGGCGACGTCGCTGTCGTGGGCGTCGCTGGCGCTGGGGTACTA CCTGAGCTCGGTGCTGGTGACGGTGGTGAACAGCGCGACGGGGCGCGGCGGGCGGCGGGC GTGGCTGCAGGGGGAGAACCTGAACCACTACCACCTGGAGAGGTTCTACTGGGTGATGTG TGTGCTCAGCACGCTCAACTACCTCTTCTTCTTGTTCTGGGCCATCCGGTACAAGTACAG AAACGCCGGGGTCATCAAGGGATGATGATCAATCTGTAATGCAGGGTTAACTGTTTAATT ATCTGGCAAGGTAAAAAAAGGAGGGAGGTTAATTTGGTGGTCTTGAGGATGCTCATTGCT GTGTGGAATTGGTTGGCTGGCTGTGGCCGATGAATGAAAAGAAGCAGCGATTAAGCAAGT TGTTC