Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os06t0574500-01
CDS Infomation

cds chromosome:IRGSP-1.0:6:22307181:22313271:1 gene:Os06g0574500 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:PROTEIN PHOSPHATASE 2A CATALYTIC SUBUNIT 1 description:Protein phosphatase 2A. (Os06t0574500-01)
Sequence

ATGCCGTCGCACGCGGATCTGGACCGGCAGATCTCGCAGCTGCGGGAGTGCAAGTTCCTG
GGGGAGGCGGAGGTGAGGGCGCTGTGCGAGCAGGCGAAGGCGATCCTCATGGAGGAGTGG
AACGTGCAGCCGGTGCGGTGCCCCGTCACCGTCTGCGGCGACATCCACGGCCAGTTCTAC
GACCTCATCGAGCTCTTCCGCATCGGCGGGGACTCCCCCGACACCAACTACCTCTTCATG
GGTGACTACGTCGACCGTGGTTACTATTCAGTGGAGACTGTTACATTACTAGTGGCTCTT
AAAGTCCGTTATAGAGACAGAATCACAATATTGAGAGGAAATCACGAGAGCAGACAAATC
ACCCAAGTGTATGGCTTCTATGACGAATGCTTACGGAAGTATGGAAATGCAAATGTTTGG
AAGTACTTCACGGACTTGTTTGATTATTTGCCTCTCACAGCTCTTGTAGAAAACCAGGTC
TTTTGCCTCCATGGCGGTCTCTCGCCGTCATTGGATACATTGGATAACATTCGTGCCCTC
GATCGCATACAGGAGGTCCCTCATGAAGGGCCCATGTGTGATCTTTTGTGGTCTGACCCG
GACGATCGATGTGGGTGGGGAATTTCTCCAAGAGGGGCAGGATACACGTTTGGGCAAGAT
ATTGCACAACAATTCAACCATACTAATGGCCTTACCCTTATTTCAAGGGCCCATCAACTT
GTGATGGAAGGCTTCAATTGGTGCCAGGACAAGAACGTTGTCACGGTGTTCAGCGCCCCA
AACTACTGTTACCGCTGTGGTAACATGGCAGCAATTCTAGAAATCGGGGAGAACATGGAT
CAGAACTTCCTACAGTTCGATCCAGCCCCACGACAAATAGAGCCGGACACAACGCGCAAG
ACCCCCGACTACTTTTTGTAA

Peptide Sequence

PEP ID

Os06t0574500-01
PEP Infomation

pep chromosome:IRGSP-1.0:6:22307181:22313271:1 gene:Os06g0574500 transcript:Os06t0574500-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:PROTEIN PHOSPHATASE 2A CATALYTIC SUBUNIT 1 description:Protein phosphatase 2A. (Os06t0574500-01)
Sequence

MPSHADLDRQISQLRECKFLGEAEVRALCEQAKAILMEEWNVQPVRCPVTVCGDIHGQFY
DLIELFRIGGDSPDTNYLFMGDYVDRGYYSVETVTLLVALKVRYRDRITILRGNHESRQI
TQVYGFYDECLRKYGNANVWKYFTDLFDYLPLTALVENQVFCLHGGLSPSLDTLDNIRAL
DRIQEVPHEGPMCDLLWSDPDDRCGWGISPRGAGYTFGQDIAQQFNHTNGLTLISRAHQL
VMEGFNWCQDKNVVTVFSAPNYCYRCGNMAAILEIGENMDQNFLQFDPAPRQIEPDTTRK
TPDYFL

Transcript Sequence

Transcript ID

Os06t0574500-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:6:22307181:22313271:1 gene:Os06g0574500 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:PROTEIN PHOSPHATASE 2A CATALYTIC SUBUNIT 1 description:Protein phosphatase 2A. (Os06t0574500-01)
Sequence

AGAAGAAAGAGAGAGAGAGAGATGGCGGCATGAGCACCTCCTCCTGCATCGCCACCTCCC
CCGATCCCCCGCAAACCCTAGCGACCGCGCCCCCCACCGCCACCTCCCCTGCGGCGGCGC
CCTGGTGAGGAGGGAGGAGGAGGAGGGGGAGGTGGGGAGGGGGGAGGCGACGATGCCGTC
GCACGCGGATCTGGACCGGCAGATCTCGCAGCTGCGGGAGTGCAAGTTCCTGGGGGAGGC
GGAGGTGAGGGCGCTGTGCGAGCAGGCGAAGGCGATCCTCATGGAGGAGTGGAACGTGCA
GCCGGTGCGGTGCCCCGTCACCGTCTGCGGCGACATCCACGGCCAGTTCTACGACCTCAT
CGAGCTCTTCCGCATCGGCGGGGACTCCCCCGACACCAACTACCTCTTCATGGGTGACTA
CGTCGACCGTGGTTACTATTCAGTGGAGACTGTTACATTACTAGTGGCTCTTAAAGTCCG
TTATAGAGACAGAATCACAATATTGAGAGGAAATCACGAGAGCAGACAAATCACCCAAGT
GTATGGCTTCTATGACGAATGCTTACGGAAGTATGGAAATGCAAATGTTTGGAAGTACTT
CACGGACTTGTTTGATTATTTGCCTCTCACAGCTCTTGTAGAAAACCAGGTCTTTTGCCT
CCATGGCGGTCTCTCGCCGTCATTGGATACATTGGATAACATTCGTGCCCTCGATCGCAT
ACAGGAGGTCCCTCATGAAGGGCCCATGTGTGATCTTTTGTGGTCTGACCCGGACGATCG
ATGTGGGTGGGGAATTTCTCCAAGAGGGGCAGGATACACGTTTGGGCAAGATATTGCACA
ACAATTCAACCATACTAATGGCCTTACCCTTATTTCAAGGGCCCATCAACTTGTGATGGA
AGGCTTCAATTGGTGCCAGGACAAGAACGTTGTCACGGTGTTCAGCGCCCCAAACTACTG
TTACCGCTGTGGTAACATGGCAGCAATTCTAGAAATCGGGGAGAACATGGATCAGAACTT
CCTACAGTTCGATCCAGCCCCACGACAAATAGAGCCGGACACAACGCGCAAGACCCCCGA
CTACTTTTTGTAATCGTGGCGTTGATCTTTTTTTTTTTAACTCCCGCTGTTGATGTTCCT
CTCTGCTGCGTCTGGTTTTATGTAGATCTTCGTCCTTAGAAAATGGGTTCCCTCCTCGAG
CCAAGCTGTACCCCCCATTCTTTGTTTGGAAATTTTGTTGCAGCTCCTCAACTTCCATAG
AACATGTTAAAACGTACATGGCGTTGTTTTTTCCTTTTTCCTTTTTTATGTACCTCCCAT
TTTGTATTATTCTGAGACAGGAGAGATGGGAAGCTGCAATAGAGTTGTCTCGTGAC