Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os06t0571100-01
CDS Infomation	cds chromosome:IRGSP-1.0:6:22123353:22127346:-1 gene:Os06g0571100 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:HISTONE DEACETYLASE 6 description:Similar to HDA2 (Fragment). (Os06t0571100-01)
Sequence	ATGGCCTCTTCCGCGCCGTCCGCGGCGGCGGGGGCGACCCCGCCGGACCCCCTCCGCCGC GACCGCATCCTCTCCAGCAAGCTCTACCTCGACGTCCCGGGCTCCAAGGCTCCGGTGGTG TACTCGCCGGCGTACGACATCGCCTTCCTCGGGATCGAGAAGCTGCACCCGTTCGATTCC TCCAAATGGGGCCGCATATGCAAGTTCCTCACCAAGGAAGGGCACCTGGAGAAGAACCGA GTGGTGGAGCCATTGGAAGCGACCAAGGACGATTTGCTGGTGGTGCACTCGGAGTCGTAC TTGAACAGCCTCAAGAGCAGCCTGAAGGTTGCGTCCATTGTAGAGCTTCCTCCTGTGGCA TTCATTCCTAATTGGCTTGTGCAGCAAAAGCTACTGTACCCTTTCAGGAAACAGGTGGGT GGGTCGATTCTATCGGCCAAGCTTGCACTTGAGAGAGGATGGGCCATTAATGTTGGCGGA GGGTTTCACCATTGTTCGGCAGAGCAAGGGGGCGGGTTTTGTGCATATGCTGATATTTCT CTCTGCATTCAGTTTGCTTTTGTCCGTCTAAATATTTCAAGAGTGATGATCATAGATCTG GATGCCCACCAAGGAAATGGCCATGAAAAGGATTTCGCTAATGATGGAAGAGTTTACACT TTGGATATGTACAATGCTGGAATATATCCCTATGATCATGTTGCTAAGCGGTATATTGAT CAAAAAGTCGAGCTAGTTAGTGGGACAAAGACAGAAGACTACTTGGATCAACTTGACAAG GCTCTTAAGGTTGCAGAAAGTAGATTTCAGCCTCAGTTGATTGTTTACAATGCTGGGACA GATATCCTGGATGGCGATCCATTGGGAAGATTGAAGATAAGCCCTCAGGGCGTGGTGATC AGAGATGAGAAGGTGTTCAGGTTTGCAAAGGATCAAAGCATCCCACTACTCATGTTAACA TCAGGAGGATACATGAAGTCGAGCGCCCGAGTGATCGCCGACTCGATAATCAATCTCTCG AATAAAAACTTGATAGAGCTTGGTAGCCAGCTTGGCTGA

Peptide Sequence

PEP ID	Os06t0571100-01
PEP Infomation	pep chromosome:IRGSP-1.0:6:22123353:22127346:-1 gene:Os06g0571100 transcript:Os06t0571100-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:HISTONE DEACETYLASE 6 description:Similar to HDA2 (Fragment). (Os06t0571100-01)
Sequence	MASSAPSAAAGATPPDPLRRDRILSSKLYLDVPGSKAPVVYSPAYDIAFLGIEKLHPFDS SKWGRICKFLTKEGHLEKNRVVEPLEATKDDLLVVHSESYLNSLKSSLKVASIVELPPVA FIPNWLVQQKLLYPFRKQVGGSILSAKLALERGWAINVGGGFHHCSAEQGGGFCAYADIS LCIQFAFVRLNISRVMIIDLDAHQGNGHEKDFANDGRVYTLDMYNAGIYPYDHVAKRYID QKVELVSGTKTEDYLDQLDKALKVAESRFQPQLIVYNAGTDILDGDPLGRLKISPQGVVI RDEKVFRFAKDQSIPLLMLTSGGYMKSSARVIADSIINLSNKNLIELGSQLG

Transcript Sequence

Transcript ID	Os06t0571100-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:6:22123353:22127346:-1 gene:Os06g0571100 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:HISTONE DEACETYLASE 6 description:Similar to HDA2 (Fragment). (Os06t0571100-01)
Sequence	AGTGCATCGCAAATATCACATCACCGAATTCTCCCGAGCTCCGGCGACGTGGTCGCGCAT TCCTCTTCTCGCCGGCAGACTCGCCGCCGTCCTCCGCCGCCCCTCTCGCGGCGCAGCGAT TCGTCTCCCTCCTCCGCAACCGCGCCCGAGCTCCCCCCTCCTCCCCGCATCCGGTGGATG GCCTCTTCCGCGCCGTCCGCGGCGGCGGGGGCGACCCCGCCGGACCCCCTCCGCCGCGAC CGCATCCTCTCCAGCAAGCTCTACCTCGACGTCCCGGGCTCCAAGGCTCCGGTGGTGTAC TCGCCGGCGTACGACATCGCCTTCCTCGGGATCGAGAAGCTGCACCCGTTCGATTCCTCC AAATGGGGCCGCATATGCAAGTTCCTCACCAAGGAAGGGCACCTGGAGAAGAACCGAGTG GTGGAGCCATTGGAAGCGACCAAGGACGATTTGCTGGTGGTGCACTCGGAGTCGTACTTG AACAGCCTCAAGAGCAGCCTGAAGGTTGCGTCCATTGTAGAGCTTCCTCCTGTGGCATTC ATTCCTAATTGGCTTGTGCAGCAAAAGCTACTGTACCCTTTCAGGAAACAGGTGGGTGGG TCGATTCTATCGGCCAAGCTTGCACTTGAGAGAGGATGGGCCATTAATGTTGGCGGAGGG TTTCACCATTGTTCGGCAGAGCAAGGGGGCGGGTTTTGTGCATATGCTGATATTTCTCTC TGCATTCAGTTTGCTTTTGTCCGTCTAAATATTTCAAGAGTGATGATCATAGATCTGGAT GCCCACCAAGGAAATGGCCATGAAAAGGATTTCGCTAATGATGGAAGAGTTTACACTTTG GATATGTACAATGCTGGAATATATCCCTATGATCATGTTGCTAAGCGGTATATTGATCAA AAAGTCGAGCTAGTTAGTGGGACAAAGACAGAAGACTACTTGGATCAACTTGACAAGGCT CTTAAGGTTGCAGAAAGTAGATTTCAGCCTCAGTTGATTGTTTACAATGCTGGGACAGAT ATCCTGGATGGCGATCCATTGGGAAGATTGAAGATAAGCCCTCAGGGCGTGGTGATCAGA GATGAGAAGGTGTTCAGGTTTGCAAAGGATCAAAGCATCCCACTACTCATGTTAACATCA GGAGGATACATGAAGTCGAGCGCCCGAGTGATCGCCGACTCGATAATCAATCTCTCGAAT AAAAACTTGATAGAGCTTGGTAGCCAGCTTGGCTGAACGAGTGCTTAGCCTGAATCGACA GATCGCAGATCTACTGGATGTATATATCCTGTCTATAAGAGGCTTACACTAATGTGATAA TGGTATTAATATAAGCCACAAAAATCGTTATC