Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os06t0570900-00
CDS Infomation	cds chromosome:IRGSP-1.0:6:22119287:22122825:1 gene:Os06g0570900 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:basic helix-loop-helix protein 030 description:Helix-loop-helix DNA-binding domain containing protein. (Os06t0570900-00)
Sequence	ATGGACGCCATCTTCGCGCTCCCGCCGGACGCCCGGGCGCGCGCCATGGGCCGCGCCGCG GCGCGCCTTCCCGGGTGCCTCTACCTCTGCCTCTGGGCGCCGGCGGCGGCCATCGCCGGC GGCGTCCAGCCCAACCATCTGTTCTGCTTGGACGCGTGGATCGGCGGCGGTGGCGGCGTC GGCGCCGGCGGAGGCGGTGGTGACCGCGCGCTGGAGCTGTTCGAGGCGTACAGGGGGGCG CTCTGCGCCGCCGTGAGCGGGTGCGTGCCGGGTTGGGCGTACAAGGAGGGCGCCGCGTGC ATGGAGCTGACGGAGCACGACCTGGCGGCGTCGGCGTCGCTGCAGGTGCAGCAGCAGTTC TACCACGAAACCGGCACCAAGATGGCGGTGTTCATGGGATGCGACAGCGGGGAGATCGAG GTCGGGCTGTCGGCCGCCTCGGCGACGGCGACGGCGGCGGTGGTGGGTGAGATGCAGCAG TCGATACTGGAGGAGCTCCTCCAGATGCCGCCGCCGCCGCCGTCGCCCTCGTCGTCCTCG CTGCTGTCGCTGTCCGTCGGGAGCCCGGAATACTCCTCGCTCGTTCGCTCGATGGCGACG TCGGTCGGTGCGTCCGCCGCCGCGGATCCGTCCCCGGTGCACGGCGGCCTGCTCGCGCCT GTCTACGGCGAGTTCCCGGGCTCCGACGACGACGCCGCGATGGCGCAGGCGATGCTCGCG GTCATCTCCACCCCCGCGCCTCCGCCTCCGCTGTGGCGTCCGCCCCGGCGCCGCGCGCGC TCCAGCTCGTCGCCGCGCAGGGCGACGGCGTTCAAGGCGTACAACGCCGCGCTCTCGCCG AGGGCGCGGCCGCGGCCGGGCGCGCCGGGGCAGAGGATGATCAAGACGGGCATCTCGCTC CTCGCCAGCGTGCACATGCAAACGCGCAGCCGAGAGCTCGCCGCGGCGCGCCAAAGAGAC ACTCACGCCGCGCCGCCGCCGCCGCCACCGCCGCCACCGCCCAGCAGCAGCCAGCTTCAC CACATGATCTCGGAGCGCCGCCGGCGAGAACGGATCAACGACAGCTTCCAGACGCTCAGG GCATTGCTCCCTCTCCCTCCCGATTCAAAGAAAGACAAGGCGGCTATTCTCGCCAGCACG ACGGAGTACATGGACAAGCTGATATCGCAGGTGTCCGAGCTGGGGGAGAAGAACCGGCAG CTGGAGGCGCAGCTCGCCGCGCGTTCCGGCGAGGCCCAGTGGCCGGCTGCAAGCGGCGGC GGTGGCGGTGAGTCGTCGTCGGAGAGAGTGCAGGTCGACGTTGTCATCGCCGGCTCGTCG GCGTCGACCGATCAGCCTCGGGAGGTGAGCATCAGGGTGACGGTGCGCGCTGAGTGCGAC GTGTCGGAGCTCGTCGTCGCCGTGCTCGCGCGGCTGAGAGAGATGGGTCGCTTCGCCGTG GTGTCCGTCGACGCGGGGCGAAGGAGCAGCTCGTTTGCACAAGCCAGCCTTACGTTCCGT GTCATGGCCGGCGACGTCTGCGACGAGACATCGCTGAAGGAAGCCGTGGCGAAGGCCGTG GACGGCGCGGTGACAGCGCCGCCGCCGCCGGTGGCGCCACCGCCACCGACATCGCCGTAG

Peptide Sequence

PEP ID	Os06t0570900-00
PEP Infomation	pep chromosome:IRGSP-1.0:6:22119287:22122825:1 gene:Os06g0570900 transcript:Os06t0570900-00 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:basic helix-loop-helix protein 030 description:Helix-loop-helix DNA-binding domain containing protein. (Os06t0570900-00)
Sequence	MDAIFALPPDARARAMGRAAARLPGCLYLCLWAPAAAIAGGVQPNHLFCLDAWIGGGGGV GAGGGGGDRALELFEAYRGALCAAVSGCVPGWAYKEGAACMELTEHDLAASASLQVQQQF YHETGTKMAVFMGCDSGEIEVGLSAASATATAAVVGEMQQSILEELLQMPPPPPSPSSSS LLSLSVGSPEYSSLVRSMATSVGASAAADPSPVHGGLLAPVYGEFPGSDDDAAMAQAMLA VISTPAPPPPLWRPPRRRARSSSSPRRATAFKAYNAALSPRARPRPGAPGQRMIKTGISL LASVHMQTRSRELAAARQRDTHAAPPPPPPPPPPSSSQLHHMISERRRRERINDSFQTLR ALLPLPPDSKKDKAAILASTTEYMDKLISQVSELGEKNRQLEAQLAARSGEAQWPAASGG GGGESSSERVQVDVVIAGSSASTDQPREVSIRVTVRAECDVSELVVAVLARLREMGRFAV VSVDAGRRSSSFAQASLTFRVMAGDVCDETSLKEAVAKAVDGAVTAPPPPVAPPPPTSP

Transcript Sequence

Transcript ID	Os06t0570900-00
Transcript Infomation	cdna chromosome:IRGSP-1.0:6:22119287:22122825:1 gene:Os06g0570900 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:basic helix-loop-helix protein 030 description:Helix-loop-helix DNA-binding domain containing protein. (Os06t0570900-00)
Sequence	CGGCGTCATGGACGCCATCTTCGCGCTCCCGCCGGACGCCCGGGCGCGCGCCATGGGCCG CGCCGCGGCGCGCCTTCCCGGGTGCCTCTACCTCTGCCTCTGGGCGCCGGCGGCGGCCAT CGCCGGCGGCGTCCAGCCCAACCATCTGTTCTGCTTGGACGCGTGGATCGGCGGCGGTGG CGGCGTCGGCGCCGGCGGAGGCGGTGGTGACCGCGCGCTGGAGCTGTTCGAGGCGTACAG GGGGGCGCTCTGCGCCGCCGTGAGCGGGTGCGTGCCGGGTTGGGCGTACAAGGAGGGCGC CGCGTGCATGGAGCTGACGGAGCACGACCTGGCGGCGTCGGCGTCGCTGCAGGTGCAGCA GCAGTTCTACCACGAAACCGGCACCAAGATGGCGGTGTTCATGGGATGCGACAGCGGGGA GATCGAGGTCGGGCTGTCGGCCGCCTCGGCGACGGCGACGGCGGCGGTGGTGGGTGAGAT GCAGCAGTCGATACTGGAGGAGCTCCTCCAGATGCCGCCGCCGCCGCCGTCGCCCTCGTC GTCCTCGCTGCTGTCGCTGTCCGTCGGGAGCCCGGAATACTCCTCGCTCGTTCGCTCGAT GGCGACGTCGGTCGGTGCGTCCGCCGCCGCGGATCCGTCCCCGGTGCACGGCGGCCTGCT CGCGCCTGTCTACGGCGAGTTCCCGGGCTCCGACGACGACGCCGCGATGGCGCAGGCGAT GCTCGCGGTCATCTCCACCCCCGCGCCTCCGCCTCCGCTGTGGCGTCCGCCCCGGCGCCG CGCGCGCTCCAGCTCGTCGCCGCGCAGGGCGACGGCGTTCAAGGCGTACAACGCCGCGCT CTCGCCGAGGGCGCGGCCGCGGCCGGGCGCGCCGGGGCAGAGGATGATCAAGACGGGCAT CTCGCTCCTCGCCAGCGTGCACATGCAAACGCGCAGCCGAGAGCTCGCCGCGGCGCGCCA AAGAGACACTCACGCCGCGCCGCCGCCGCCGCCACCGCCGCCACCGCCCAGCAGCAGCCA GCTTCACCACATGATCTCGGAGCGCCGCCGGCGAGAACGGATCAACGACAGCTTCCAGAC GCTCAGGGCATTGCTCCCTCTCCCTCCCGATTCAAAGAAAGACAAGGCGGCTATTCTCGC CAGCACGACGGAGTACATGGACAAGCTGATATCGCAGGTGTCCGAGCTGGGGGAGAAGAA CCGGCAGCTGGAGGCGCAGCTCGCCGCGCGTTCCGGCGAGGCCCAGTGGCCGGCTGCAAG CGGCGGCGGTGGCGGTGAGTCGTCGTCGGAGAGAGTGCAGGTCGACGTTGTCATCGCCGG CTCGTCGGCGTCGACCGATCAGCCTCGGGAGGTGAGCATCAGGGTGACGGTGCGCGCTGA GTGCGACGTGTCGGAGCTCGTCGTCGCCGTGCTCGCGCGGCTGAGAGAGATGGGTCGCTT CGCCGTGGTGTCCGTCGACGCGGGGCGAAGGAGCAGCTCGTTTGCACAAGCCAGCCTTAC GTTCCGTGTCATGGCCGGCGACGTCTGCGACGAGACATCGCTGAAGGAAGCCGTGGCGAA GGCCGTGGACGGCGCGGTGACAGCGCCGCCGCCGCCGGTGGCGCCACCGCCACCGACATC GCCGTAGGCAGAGGCAGAGCACACCAGTTTTGACCGGATCAGGGAGGAGGTGAGGCTAAC TGAAGAAGGCAGGAGGATATGGCTATGTTTGGTGGCAATGGTGGTTTCGGTTTTCACTTC AGTCATTTCACTGTCTTGTAACTCTTGTTGCTTCTTTT