Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os06t0568000-01
CDS Infomation

cds chromosome:IRGSP-1.0:6:21955256:21956670:-1 gene:Os06g0568000 gene_biotype:protein_coding transcript_biotype:protein_coding description:Nonaspanin (TM9SF) family protein. (Os06t0568000-01)
Sequence

TGGGCATCTCGTTGGGATGTCTATCTTCTTTCAAGTGATAGCCAGATCCATTGGTTCTCA
ATCATTAACTCACTGATGATTGTCCTTTTCCTTTCTGGCATGGTAGCCATGATCATGATG
AGAACTCTTTACAAGGATATTGCAAACTATAATCAGCTTGACAACCAGGATGAGGCCCAG
GAAGAAACTGGCTGGAAGTTAGTGCATGGTGATGTCTTCAGGCCACCTGTCCACTCAGGC
CTCCTTTGTGTTTATGTTGGAACTGGTGTGCAGTTCTTTGGAATGACACTGGTAACCATG
ATGTTTGCGCTACTTGGATTCTTGTCCCCTGCAAACCGTGGTGGACTAATGACTGCTATG
GTCCTTCTGTGGGTGTTCATGGGTGTATTGGCAGGATACACCTCATCTCGCCTATATAAG
ATGTTCAAAGGCACTGAATGGAAGAAAATCACCCTCAAGACTGCCTTTATGTTTCCTGGT
ATAATCTTTGCACTCTTTTTCTTCCTAAATGCCCTGATCTGGGGTGAGAAATCATCAGGT
GCAGTTCCCTTTGGAACAATGTTTGCTCTGTTCCTCCTTTGGTTTGGCATCTCTGTGCCG
CTAGTCTTTGTTGGAAGTTTCTTGGGCTTCAAGCAGCCAGCCATTGAGGACCCAGTGAAG
ACAAACAAGATTCCCAGGCAAATTCCTGAGCAGGCATGGTACCTGCAGCCAGCTTTCTCA
ATACTTGCTGGTGGCATATTGCCATTTGGCGCTGTCTTCATCGAGCTCTTCTTCATTCTG
ACATCAATCTGGCTGAACCAGTTCTACTACATCTTCGGCTTCCTCTTCATAGTCTTCATC
ATCCTCATCGTTACTTGTGCTGAGATCACAATTGTGCTCTGCTACTTCCAACTATGCAGC
GAGGACTATCACTGGTGGTGGAGAGCATACCTGACTGCTGGCTCTTCAGCACTGTATCTT
TTTGCTTATGCCATCTTCTACTTCTTCAACAAGCTGGAGATCACGAAGCTTGTTTCAGGC
ATTCTCTACTTTGGTTACATGCTGATCATCTCGTATGCTTTCTTCGTGCTGACTGGTACC
ATTGGCTTCTATGCTTGCTTCTGGTTCGTGAGGAAGATATATGCTTCTGTGAAGATCGAC
TGA

Peptide Sequence

PEP ID

Os06t0568000-01
PEP Infomation

pep chromosome:IRGSP-1.0:6:21955256:21956670:-1 gene:Os06g0568000 transcript:Os06t0568000-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Nonaspanin (TM9SF) family protein. (Os06t0568000-01)
Sequence

WASRWDVYLLSSDSQIHWFSIINSLMIVLFLSGMVAMIMMRTLYKDIANYNQLDNQDEAQ
EETGWKLVHGDVFRPPVHSGLLCVYVGTGVQFFGMTLVTMMFALLGFLSPANRGGLMTAM
VLLWVFMGVLAGYTSSRLYKMFKGTEWKKITLKTAFMFPGIIFALFFFLNALIWGEKSSG
AVPFGTMFALFLLWFGISVPLVFVGSFLGFKQPAIEDPVKTNKIPRQIPEQAWYLQPAFS
ILAGGILPFGAVFIELFFILTSIWLNQFYYIFGFLFIVFIILIVTCAEITIVLCYFQLCS
EDYHWWWRAYLTAGSSALYLFAYAIFYFFNKLEITKLVSGILYFGYMLIISYAFFVLTGT
IGFYACFWFVRKIYASVKID

Transcript Sequence

Transcript ID

Os06t0568000-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:6:21955256:21956670:-1 gene:Os06g0568000 gene_biotype:protein_coding transcript_biotype:protein_coding description:Nonaspanin (TM9SF) family protein. (Os06t0568000-01)
Sequence

TATGGGCATCTCGTTGGGATGTCTATCTTCTTTCAAGTGATAGCCAGATCCATTGGTTCT
CAATCATTAACTCACTGATGATTGTCCTTTTCCTTTCTGGCATGGTAGCCATGATCATGA
TGAGAACTCTTTACAAGGATATTGCAAACTATAATCAGCTTGACAACCAGGATGAGGCCC
AGGAAGAAACTGGCTGGAAGTTAGTGCATGGTGATGTCTTCAGGCCACCTGTCCACTCAG
GCCTCCTTTGTGTTTATGTTGGAACTGGTGTGCAGTTCTTTGGAATGACACTGGTAACCA
TGATGTTTGCGCTACTTGGATTCTTGTCCCCTGCAAACCGTGGTGGACTAATGACTGCTA
TGGTCCTTCTGTGGGTGTTCATGGGTGTATTGGCAGGATACACCTCATCTCGCCTATATA
AGATGTTCAAAGGCACTGAATGGAAGAAAATCACCCTCAAGACTGCCTTTATGTTTCCTG
GTATAATCTTTGCACTCTTTTTCTTCCTAAATGCCCTGATCTGGGGTGAGAAATCATCAG
GTGCAGTTCCCTTTGGAACAATGTTTGCTCTGTTCCTCCTTTGGTTTGGCATCTCTGTGC
CGCTAGTCTTTGTTGGAAGTTTCTTGGGCTTCAAGCAGCCAGCCATTGAGGACCCAGTGA
AGACAAACAAGATTCCCAGGCAAATTCCTGAGCAGGCATGGTACCTGCAGCCAGCTTTCT
CAATACTTGCTGGTGGCATATTGCCATTTGGCGCTGTCTTCATCGAGCTCTTCTTCATTC
TGACATCAATCTGGCTGAACCAGTTCTACTACATCTTCGGCTTCCTCTTCATAGTCTTCA
TCATCCTCATCGTTACTTGTGCTGAGATCACAATTGTGCTCTGCTACTTCCAACTATGCA
GCGAGGACTATCACTGGTGGTGGAGAGCATACCTGACTGCTGGCTCTTCAGCACTGTATC
TTTTTGCTTATGCCATCTTCTACTTCTTCAACAAGCTGGAGATCACGAAGCTTGTTTCAG
GCATTCTCTACTTTGGTTACATGCTGATCATCTCGTATGCTTTCTTCGTGCTGACTGGTA
CCATTGGCTTCTATGCTTGCTTCTGGTTCGTGAGGAAGATATATGCTTCTGTGAAGATCG
ACTGATGAGACAGCTCGAAACATCATCTGCTACAAATGTGATACAATGGTGTCTCCCAAT
TAACATATATAAATGGAAGTGGGATGTGCGACCGGATTGGATGGTTTTTGGTAGAACATG
TAGTCTGGTAGGAGGTAAGAATTGCCTGATGTTCAAGAGAGTTCTTGATACTCCCTGTAG
CGTGACATGAATTTTGTAACTCTGAAGATGTTTGAGTGCTTCTTGTAATATTCCATGTCT
CTTTATCTTACGGCTTCACATATTTCTTTTTCTGG