Gene sequences

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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os06t0562600-01
CDS Infomation	cds chromosome:IRGSP-1.0:6:21598246:21602635:-1 gene:Os06g0562600 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to T-complex protein 1, epsilon subunit (TCP-1-epsilon) (CCT-epsilon) (TCP-K36). (Os06t0562600-01)
Sequence	ATGGCGCTGGCCTTCGACGAGTTCGGCCGCCCCTTCATCATCCTGCGTGAGCAGGAGAAG AAGTCGCGGCTGCGCGGCCTCGACGCCCAGAAGGCCAACATCGCCGCCGGCAAGGCCGTC GCCCGCATCCTCCGCACCTCGCTCGGCCCCAAGGGCATGGACAAGATGCTCCAGTCCCCC GACGGCGACGTCACCATCACAAATGATGGCGCAACGATCCTGGAGCAAATGGATGTGGAC AACCAAATCGCGAAGCTGATGGTGGAGCTGTCCTGCAGTCAAGACTACGAGATTGGGGAT GGTACCACTGGTGTTGTGGTCATGGCTGGCTCTCTCCTGGAGCAAGCCGAGAAACTGCTG GAACGCGGCATTCACCCCATAAGGATCGCCGAAGGTTATGAGTTGGCCTCAAGGATAGCT TTTGATCACCTTGAGCACATCTCCCACAAGTTTGAGTTTAGTGCTACCAATATAGAGCCT CTGGTGCAGACCTGCATGACAACCCTGTCATCGAAAATTGTTAACCGTTGTAAGAGGACT CTTGCTGAGATTGCTGTGAAAGCGGTCCTTGCTGTGGCTGATTTGGAAAGGAAGGATGTA AACTTGGACTTGATCAAAGTGGAAGGTAAGGTAGGCGGGAAACTAGAGGATACTGAGCTA GTATATGGAATCATTGTCGACAAAGATATGAGCCACCCTCAAATGCCAAAGAGGATTGAG GATGCTAAGATTGCCATCCTGACCTGCCCATTTGAGCCCCCGAAGCCTAAGACAAAGCAT AAGGTTGACATTGATACTGTAGAGAAGTTCCAGATGCTGCGTGAGCAAGAGCAAAAATAC TTTGATGAAATGGTTCAGAAATGCAAGGATGTTGGAGCAACCCTAGTTATTTGCCAATGG GGCTTTGATGATGAAGCCAATCATCTGCTGATGCATAGAAATTTGCCAGCTGTCAGATGG GTTGGTGGTGTTGAATTAGAATTGATTGCCATTGCTACAGGAGGGCGGATTGTTCCGAGG TTCCAAGAGTTGAGTCCTGAAAAGCTTGGGAAGGCTGGAATAGTCAGAGAGAAATCATTT GGAACAACAAAAGATCGCATGCTTTACATTGAACAGTGTGCCAACTCCAGAGCTGTAACT ATCTTCATACGTGGTGGCAACAAAATGATGATTGAGGAGACCAAGCGAAGTCTTCATGAT GCTCTTTGTGTTGCAAGGAATCTTATCCGTAATAATTCAATTGTGTATGGTGGTGGTTCA GCAGAAATATCTTGCTCAGTTGCTGTTGAAGCTGCTGCAGATCGGTACCCAGGAGTTGAA CAGTATGCAATCAGGTCATTTGCTGATGCGTTGGATGCTATTCCACTAGCCTTGGCCGAA AACAGTGGTTTGTCTCCTATTGATACACTGACAGCAGTAAAATCTCAACAAGTAAAGGAG AGCAATCCTCACTGTGGCATTGACTGCAACGATGTTGGGACAAACCACATGAAGGAACAA AATGTTTTTGAAACACTGATAGGCAAGCAGCAGCAGATCTTACTGGCAACCCAGGTGGTG AAGATGATTCTCAAGATCGATGATGTTATCTCGCCTTCTGACTATTGA

Peptide Sequence

PEP ID	Os06t0562600-01
PEP Infomation	pep chromosome:IRGSP-1.0:6:21598246:21602635:-1 gene:Os06g0562600 transcript:Os06t0562600-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to T-complex protein 1, epsilon subunit (TCP-1-epsilon) (CCT-epsilon) (TCP-K36). (Os06t0562600-01)
Sequence	MALAFDEFGRPFIILREQEKKSRLRGLDAQKANIAAGKAVARILRTSLGPKGMDKMLQSP DGDVTITNDGATILEQMDVDNQIAKLMVELSCSQDYEIGDGTTGVVVMAGSLLEQAEKLL ERGIHPIRIAEGYELASRIAFDHLEHISHKFEFSATNIEPLVQTCMTTLSSKIVNRCKRT LAEIAVKAVLAVADLERKDVNLDLIKVEGKVGGKLEDTELVYGIIVDKDMSHPQMPKRIE DAKIAILTCPFEPPKPKTKHKVDIDTVEKFQMLREQEQKYFDEMVQKCKDVGATLVICQW GFDDEANHLLMHRNLPAVRWVGGVELELIAIATGGRIVPRFQELSPEKLGKAGIVREKSF GTTKDRMLYIEQCANSRAVTIFIRGGNKMMIEETKRSLHDALCVARNLIRNNSIVYGGGS AEISCSVAVEAAADRYPGVEQYAIRSFADALDAIPLALAENSGLSPIDTLTAVKSQQVKE SNPHCGIDCNDVGTNHMKEQNVFETLIGKQQQILLATQVVKMILKIDDVISPSDY

Transcript Sequence

Transcript ID	Os06t0562600-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:6:21598246:21602635:-1 gene:Os06g0562600 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to T-complex protein 1, epsilon subunit (TCP-1-epsilon) (CCT-epsilon) (TCP-K36). (Os06t0562600-01)
Sequence	CCGCCACCGCCACTCCCCCCCCCCGCGCCGCCACCCCACCCCACCCCACCCCACGCCGTC TCCTCCGATCGCCGGAGAAGGAGGAGGAGGCGTCAGCCATGGCGCTGGCCTTCGACGAGT TCGGCCGCCCCTTCATCATCCTGCGTGAGCAGGAGAAGAAGTCGCGGCTGCGCGGCCTCG ACGCCCAGAAGGCCAACATCGCCGCCGGCAAGGCCGTCGCCCGCATCCTCCGCACCTCGC TCGGCCCCAAGGGCATGGACAAGATGCTCCAGTCCCCCGACGGCGACGTCACCATCACAA ATGATGGCGCAACGATCCTGGAGCAAATGGATGTGGACAACCAAATCGCGAAGCTGATGG TGGAGCTGTCCTGCAGTCAAGACTACGAGATTGGGGATGGTACCACTGGTGTTGTGGTCA TGGCTGGCTCTCTCCTGGAGCAAGCCGAGAAACTGCTGGAACGCGGCATTCACCCCATAA GGATCGCCGAAGGTTATGAGTTGGCCTCAAGGATAGCTTTTGATCACCTTGAGCACATCT CCCACAAGTTTGAGTTTAGTGCTACCAATATAGAGCCTCTGGTGCAGACCTGCATGACAA CCCTGTCATCGAAAATTGTTAACCGTTGTAAGAGGACTCTTGCTGAGATTGCTGTGAAAG CGGTCCTTGCTGTGGCTGATTTGGAAAGGAAGGATGTAAACTTGGACTTGATCAAAGTGG AAGGTAAGGTAGGCGGGAAACTAGAGGATACTGAGCTAGTATATGGAATCATTGTCGACA AAGATATGAGCCACCCTCAAATGCCAAAGAGGATTGAGGATGCTAAGATTGCCATCCTGA CCTGCCCATTTGAGCCCCCGAAGCCTAAGACAAAGCATAAGGTTGACATTGATACTGTAG AGAAGTTCCAGATGCTGCGTGAGCAAGAGCAAAAATACTTTGATGAAATGGTTCAGAAAT GCAAGGATGTTGGAGCAACCCTAGTTATTTGCCAATGGGGCTTTGATGATGAAGCCAATC ATCTGCTGATGCATAGAAATTTGCCAGCTGTCAGATGGGTTGGTGGTGTTGAATTAGAAT TGATTGCCATTGCTACAGGAGGGCGGATTGTTCCGAGGTTCCAAGAGTTGAGTCCTGAAA AGCTTGGGAAGGCTGGAATAGTCAGAGAGAAATCATTTGGAACAACAAAAGATCGCATGC TTTACATTGAACAGTGTGCCAACTCCAGAGCTGTAACTATCTTCATACGTGGTGGCAACA AAATGATGATTGAGGAGACCAAGCGAAGTCTTCATGATGCTCTTTGTGTTGCAAGGAATC TTATCCGTAATAATTCAATTGTGTATGGTGGTGGTTCAGCAGAAATATCTTGCTCAGTTG CTGTTGAAGCTGCTGCAGATCGGTACCCAGGAGTTGAACAGTATGCAATCAGGTCATTTG CTGATGCGTTGGATGCTATTCCACTAGCCTTGGCCGAAAACAGTGGTTTGTCTCCTATTG ATACACTGACAGCAGTAAAATCTCAACAAGTAAAGGAGAGCAATCCTCACTGTGGCATTG ACTGCAACGATGTTGGGACAAACCACATGAAGGAACAAAATGTTTTTGAAACACTGATAG GCAAGCAGCAGCAGATCTTACTGGCAACCCAGGTGGTGAAGATGATTCTCAAGATCGATG ATGTTATCTCGCCTTCTGACTATTGATGATGCTTTTGAAGACTATGGAGTTTATTGTGCT AGGGCCTTGGCGACAAGCACTTCCAGTAGGCTCTACATTTTCTGTCGATCGGTTTTTGAT TAACATTTACGCCATGGGTTTGCTTGCTTGTGCTATTTGATGAGCTATCTGTTTGTGTGA ACTTAACTTTTGGTACTTTGTTTTTCGCGCCCGCACTTTGTATAGCTTGAGACAATAGCA CAATCCCTTTGAAGCTGGCCTAGAAGTTTGAGTAGCTACCATTTGCTCTTGTGCTGCTCA GATTCGTAGATGCTATATAGGTTGCGCGCTGTGGTAGTATCGTATTGTGTTCTGCATCGT CCGCATGTACTCTACTTTTCTTAATGATCATTTTGAGCCATATGAATATTT