Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os06t0561000-01
CDS Infomation

cds chromosome:IRGSP-1.0:6:21478477:21482381:1 gene:Os06g0561000 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:Myo-inositol oxygenase description:Myo-inositol oxygenase, Drought stress tolerance (Os06t0561000-01)
Sequence

ATGACCATCACCATTGAGCAGCCTCACCTTGATGCTATCGCCGACCGGAAGGTCGCCGGC
GGCGGCGGCGGCGACAACGCGGCGGAGCTCGTGCTCGACGGCGGCTTCGTCGTGCCGGAC
TCCAACGCCTTCGGCAACGCCTTCAGGAATTATGAGGCCGAGTCTGAGAGGAAGGAGACG
GTGGAGGAGTTCTACCGGGTCAACCACATCAACCAGACATATGATTTCGTGAGGCGGATG
CGGGAGGAGTACGGTAGGGTGGACAAGACGGAGATGGGGATCTGGGAGTGCATCGAGCTG
CTCAACGAGTTCATCGACGACAGCGACCCGGACCTCGACATGCCGCAGATCGAGCACCTC
CTCCAGACCGCCGAGGCCATCCGCAAGGATTTCCCCGACGAGGACTGGCTCCACCTCACT
GGCCTCATCCACGATCTGGGCAAGGTGCTGCTGCATCCCAGCTTTGGGGAGCTCCCACAG
TGGTCAGTCGTCGGTGACACCTTCCCCGTCGGCTGCGCATTCGACGAATGCAACGTCCAC
TTCAAGTACTTCAAGGAGAACCCTGACTACCTGAACCCAAAGCTCAACACCAAGTTTGGG
GCCTACTCCGAGGGCTGTGGCCTTGACAATGTTCTCATGTCCTGGGGCCATGACGACTAC
ATGTACCTGGTTGCCAAGGAGAACAAGACCACTCTTCCTTCTGCAGGCTTGTTCATCATC
AGATATCATTCATTCTACCCCCTGCACAAGCATGGAGCCTACATGCATCTGATGAACGAT
GAGGACAAGGAGAACCTCAAATGGCTGCGTGTGTTCAACAAATACGACCTGTACAGCAAG
AGCAATGAGAGGATAGACGTTGAGAAGGTGAAGCCCTACTACATGTCACTCATCGAAAAG
TATTTCCCGGCCAAGTTGAGATGGTGA

Peptide Sequence

PEP ID

Os06t0561000-01
PEP Infomation

pep chromosome:IRGSP-1.0:6:21478477:21482381:1 gene:Os06g0561000 transcript:Os06t0561000-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:Myo-inositol oxygenase description:Myo-inositol oxygenase, Drought stress tolerance (Os06t0561000-01)
Sequence

MTITIEQPHLDAIADRKVAGGGGGDNAAELVLDGGFVVPDSNAFGNAFRNYEAESERKET
VEEFYRVNHINQTYDFVRRMREEYGRVDKTEMGIWECIELLNEFIDDSDPDLDMPQIEHL
LQTAEAIRKDFPDEDWLHLTGLIHDLGKVLLHPSFGELPQWSVVGDTFPVGCAFDECNVH
FKYFKENPDYLNPKLNTKFGAYSEGCGLDNVLMSWGHDDYMYLVAKENKTTLPSAGLFII
RYHSFYPLHKHGAYMHLMNDEDKENLKWLRVFNKYDLYSKSNERIDVEKVKPYYMSLIEK
YFPAKLRW

Transcript Sequence

Transcript ID

Os06t0561000-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:6:21478477:21482381:1 gene:Os06g0561000 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:Myo-inositol oxygenase description:Myo-inositol oxygenase, Drought stress tolerance (Os06t0561000-01)
Sequence

AGCTCAGGCAGCAGCAGAAAGCAACGCCAATACGCCATTGCCGTGCTCCTCGACCTGCAT
GCACCTCTGTTCTTGGCGTTGAGATACATAGAGGCTTGGGGTGGGTGTTTAAGAACTAAG
ACCGGAGTTAATTAGCACCCCTGTGGCTACCATCGATCTGTCTAAAGAGTGATTAGATCG
AGATGACCATCACCATTGAGCAGCCTCACCTTGATGCTATCGCCGACCGGAAGGTCGCCG
GCGGCGGCGGCGGCGACAACGCGGCGGAGCTCGTGCTCGACGGCGGCTTCGTCGTGCCGG
ACTCCAACGCCTTCGGCAACGCCTTCAGGAATTATGAGGCCGAGTCTGAGAGGAAGGAGA
CGGTGGAGGAGTTCTACCGGGTCAACCACATCAACCAGACATATGATTTCGTGAGGCGGA
TGCGGGAGGAGTACGGTAGGGTGGACAAGACGGAGATGGGGATCTGGGAGTGCATCGAGC
TGCTCAACGAGTTCATCGACGACAGCGACCCGGACCTCGACATGCCGCAGATCGAGCACC
TCCTCCAGACCGCCGAGGCCATCCGCAAGGATTTCCCCGACGAGGACTGGCTCCACCTCA
CTGGCCTCATCCACGATCTGGGCAAGGTGCTGCTGCATCCCAGCTTTGGGGAGCTCCCAC
AGTGGTCAGTCGTCGGTGACACCTTCCCCGTCGGCTGCGCATTCGACGAATGCAACGTCC
ACTTCAAGTACTTCAAGGAGAACCCTGACTACCTGAACCCAAAGCTCAACACCAAGTTTG
GGGCCTACTCCGAGGGCTGTGGCCTTGACAATGTTCTCATGTCCTGGGGCCATGACGACT
ACATGTACCTGGTTGCCAAGGAGAACAAGACCACTCTTCCTTCTGCAGGCTTGTTCATCA
TCAGATATCATTCATTCTACCCCCTGCACAAGCATGGAGCCTACATGCATCTGATGAACG
ATGAGGACAAGGAGAACCTCAAATGGCTGCGTGTGTTCAACAAATACGACCTGTACAGCA
AGAGCAATGAGAGGATAGACGTTGAGAAGGTGAAGCCCTACTACATGTCACTCATCGAAA
AGTATTTCCCGGCCAAGTTGAGATGGTGAAGAAGAGGGAGAGAACATAAAAAAAATTGGT
CGAAATTATCCTGTAATATGATGTAATTGCAGGAGTTCAGTTGGCTGTACAAGTATGTAG
TAGTACGTGTACACATTTTGTATGTTAAGAGCAGAATTTGTTGGGAGCCATGCACGTGGA
ATAAAAGTTGCCGGTGATTGTTCTTTGT