Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os06t0560700-01
CDS Infomation

cds chromosome:IRGSP-1.0:6:21447774:21450993:1 gene:Os06g0560700 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:GDSL ESTERASE/LIPASE PROTEIN 86 description:Lipase, GDSL domain containing protein. (Os06t0560700-01)
Sequence

ATGGCCAAGCTCGTCGGAGCAACTCTCTACCTCTACCTCTTCCTCTTCCTCCTGCTGCTG
CATCTCCATTGCCACCAATGCAAACCTGCTGCTGCTGCGAGCTTCGTCGTCCATGGCGGC
GGCGGAGCAACGGCAAGGGCGGCGGCGGTGAGGGCGGTGTTCGTGTTCGGGAGCTCGCTG
GTGGACAACGGCAACAACAACCACCTGAACGGCTCCGGCGCCGTGCGCGCCGACTACGCG
CCCTACGGCGTCGACTTCCCGCTGGGCGCCACCGGCCGCTTCTCCAACGGCCGCAACGTC
ATCGACGCCCTCGGGGAGCTCCTCCGCCTCCCCGCCGCCGGCCTCCTCCCGCCTTTCGCC
GACCCCGCCACCCGCGGCCGCGCCGCCCTCCACGGCGTCAACTTCGCCTCCGGCGGCTCC
GGCATCCTCGACCTCACCGGCAAGAACAAGGGAGAGGTCTTGAGCCTAAAGCAGCAGATC
ACCAACTTTGAGGCAGTGACACTCCCTGACCTGCGGGCCCACCTGCAGGGAGCAACCACA
GCCACCACCACCACCGGACACAAGATGAAGGGCCAGGATTTCTTTGACCAGTGTTACCTG
CCCAAGAGCCTGTTTATCATTGGGACAGGTGGCAATGACTACTTGCTCAACTACTTCAAC
GCTGGTAGTGGGCCCACAAGGGCCCCCTTGTCAGAGTTCACAAGCTCACTCCTCACCAAG
CTCTCAAACCACCTGCAGAGATTGTATGATCTAGGGGCAAGGAAGTTTGTGCTATTCTCC
ATCCAACCCCTGGGTTGCACCCCTGTGGTGAGGACCTTCCTCAACGCTACCAGTGATGCT
TGCATTGAGCCGATGAACCATGCGGCGCTCCTCTTCAACTCTGGGCTAAGATCTATCGTT
AAAAATCACAATGGTGGCGTGAGGTCACACATGCCCGCCGCGAGCTTCGTCTACGTCAAT
TCCTACAAGATCATTAGCGATATAATACAGCACCCGGCAAAATATGGCATCAGGAAAACG
AGTCGAGCTTGCTGTGAGGTGTCGAGGGGAGGCGTGCTGTGTCAGAAGGGGGGGGCCATC
TGCAGTGACAGGACCAAGTACGCCTTCTTCGATGGGCTCCACCCGACAGACGTGGTGAAT
GCCAGGCTGGCACGCAAGGCGTACGGCTCCAACTCGCCGGACAAAGTCTACCCTATCAAT
GTTAAGAAGTTGGCAATGCTGTAG

Peptide Sequence

PEP ID

Os06t0560700-01
PEP Infomation

pep chromosome:IRGSP-1.0:6:21447774:21450993:1 gene:Os06g0560700 transcript:Os06t0560700-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:GDSL ESTERASE/LIPASE PROTEIN 86 description:Lipase, GDSL domain containing protein. (Os06t0560700-01)
Sequence

MAKLVGATLYLYLFLFLLLLHLHCHQCKPAAAASFVVHGGGGATARAAAVRAVFVFGSSL
VDNGNNNHLNGSGAVRADYAPYGVDFPLGATGRFSNGRNVIDALGELLRLPAAGLLPPFA
DPATRGRAALHGVNFASGGSGILDLTGKNKGEVLSLKQQITNFEAVTLPDLRAHLQGATT
ATTTTGHKMKGQDFFDQCYLPKSLFIIGTGGNDYLLNYFNAGSGPTRAPLSEFTSSLLTK
LSNHLQRLYDLGARKFVLFSIQPLGCTPVVRTFLNATSDACIEPMNHAALLFNSGLRSIV
KNHNGGVRSHMPAASFVYVNSYKIISDIIQHPAKYGIRKTSRACCEVSRGGVLCQKGGAI
CSDRTKYAFFDGLHPTDVVNARLARKAYGSNSPDKVYPINVKKLAML

Transcript Sequence

Transcript ID

Os06t0560700-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:6:21447774:21450993:1 gene:Os06g0560700 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:GDSL ESTERASE/LIPASE PROTEIN 86 description:Lipase, GDSL domain containing protein. (Os06t0560700-01)
Sequence

ACATTATCTAGCTCATCAGCTTGCCGGCCATGGCCAAGCTCGTCGGAGCAACTCTCTACC
TCTACCTCTTCCTCTTCCTCCTGCTGCTGCATCTCCATTGCCACCAATGCAAACCTGCTG
CTGCTGCGAGCTTCGTCGTCCATGGCGGCGGCGGAGCAACGGCAAGGGCGGCGGCGGTGA
GGGCGGTGTTCGTGTTCGGGAGCTCGCTGGTGGACAACGGCAACAACAACCACCTGAACG
GCTCCGGCGCCGTGCGCGCCGACTACGCGCCCTACGGCGTCGACTTCCCGCTGGGCGCCA
CCGGCCGCTTCTCCAACGGCCGCAACGTCATCGACGCCCTCGGGGAGCTCCTCCGCCTCC
CCGCCGCCGGCCTCCTCCCGCCTTTCGCCGACCCCGCCACCCGCGGCCGCGCCGCCCTCC
ACGGCGTCAACTTCGCCTCCGGCGGCTCCGGCATCCTCGACCTCACCGGCAAGAACAAGG
GAGAGGTCTTGAGCCTAAAGCAGCAGATCACCAACTTTGAGGCAGTGACACTCCCTGACC
TGCGGGCCCACCTGCAGGGAGCAACCACAGCCACCACCACCACCGGACACAAGATGAAGG
GCCAGGATTTCTTTGACCAGTGTTACCTGCCCAAGAGCCTGTTTATCATTGGGACAGGTG
GCAATGACTACTTGCTCAACTACTTCAACGCTGGTAGTGGGCCCACAAGGGCCCCCTTGT
CAGAGTTCACAAGCTCACTCCTCACCAAGCTCTCAAACCACCTGCAGAGATTGTATGATC
TAGGGGCAAGGAAGTTTGTGCTATTCTCCATCCAACCCCTGGGTTGCACCCCTGTGGTGA
GGACCTTCCTCAACGCTACCAGTGATGCTTGCATTGAGCCGATGAACCATGCGGCGCTCC
TCTTCAACTCTGGGCTAAGATCTATCGTTAAAAATCACAATGGTGGCGTGAGGTCACACA
TGCCCGCCGCGAGCTTCGTCTACGTCAATTCCTACAAGATCATTAGCGATATAATACAGC
ACCCGGCAAAATATGGCATCAGGAAAACGAGTCGAGCTTGCTGTGAGGTGTCGAGGGGAG
GCGTGCTGTGTCAGAAGGGGGGGGCCATCTGCAGTGACAGGACCAAGTACGCCTTCTTCG
ATGGGCTCCACCCGACAGACGTGGTGAATGCCAGGCTGGCACGCAAGGCGTACGGCTCCA
ACTCGCCGGACAAAGTCTACCCTATCAATGTTAAGAAGTTGGCAATGCTGTAGCAGTAGT
AATAATTAATCATCTCTAATTGTAATTAAGTCATACTTAATTAGTATTACTAGCTAGTAG
TTGTGAAATGGATAATTAGCTCTAGTGAC