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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os06t0560400-01
CDS Infomation

cds chromosome:IRGSP-1.0:6:21431314:21435702:-1 gene:Os06g0560400 gene_biotype:protein_coding transcript_biotype:protein_coding description:Protein of unknown function DUF862, eukaryotic domain containing protein. (Os06t0560400-01)
Sequence

ATGGGCGGGGCGGTCTCCGGCGGCGGCGCGGGGGCGGCGGGGGCGGGGGCGGGGGCGGAG
GGGGAAGGGGCGTACACGGTGGTGCTGAATGTGTACGACCTCACGCCGCTCAACAACTAC
CTCCACTGGTGCGGCCTCGGGATCTTCCACTCCGCCGTCGAGGTCCATGGATCGGAGTAC
AGTTTTGGAGCTCATGATCACCCAACGAGTGGGGTTTTTGAGGTGGAACCAAAGTGCTGC
CCAGGGTTCATGTACAGATGTTCAATTTTCATAGGCCGTACGAGTTTGAATCCCTTAGAA
TTTCGAGATTTCATTCAGAGAATGGCTTCAGAATACCATGGAGATACTTATCACCTCATT
TCCAAAAACTGTAACCACTTTACGGATGATCTCAGTACCAGATTGACAGGAAAACCGATT
CCTGGCTGGGTTAACCGACCTGCGAAGCTAGGTGCCTTTTGCAACTGCCTTCTGCCAGAA
AGCATGCGGTTGGAGTCAACTGGGACAAAGCACCTCGCGGACTGTCATTTCTCAGATGAT
TCCCGCACATCCAGCAATGAGCATTTTGAAGATGAAGATCTTGAAGACAAGCACCTGCTT
TCACAATCTTCTGTTTCTGAAGATGCAATTGTAAAGGAAGTTCACAGGTGA

Peptide Sequence

PEP ID

Os06t0560400-01
PEP Infomation

pep chromosome:IRGSP-1.0:6:21431314:21435702:-1 gene:Os06g0560400 transcript:Os06t0560400-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Protein of unknown function DUF862, eukaryotic domain containing protein. (Os06t0560400-01)
Sequence

MGGAVSGGGAGAAGAGAGAEGEGAYTVVLNVYDLTPLNNYLHWCGLGIFHSAVEVHGSEY
SFGAHDHPTSGVFEVEPKCCPGFMYRCSIFIGRTSLNPLEFRDFIQRMASEYHGDTYHLI
SKNCNHFTDDLSTRLTGKPIPGWVNRPAKLGAFCNCLLPESMRLESTGTKHLADCHFSDD
SRTSSNEHFEDEDLEDKHLLSQSSVSEDAIVKEVHR

Transcript Sequence

Transcript ID

Os06t0560400-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:6:21431314:21435702:-1 gene:Os06g0560400 gene_biotype:protein_coding transcript_biotype:protein_coding description:Protein of unknown function DUF862, eukaryotic domain containing protein. (Os06t0560400-01)
Sequence

CCATTTCTTCCCGAACCCGAACCCGCACCCGCCTCGCTCGCACGCTGCCTCCTCCTCGTC
GTCCTCCTCCTCCTCGCTGCTCCGCAAGTCCGCATCGCCTCCCCCCTCGATCCCATCTCG
GATCGCCGCCGCCGCAGCAGCAGCCGGGTGGGGCTGCGCTTGGCGGGAGGGAGGGGAGGG
TATAGGATAGGGGAGATGGGCGGGGCGGTCTCCGGCGGCGGCGCGGGGGCGGCGGGGGCG
GGGGCGGGGGCGGAGGGGGAAGGGGCGTACACGGTGGTGCTGAATGTGTACGACCTCACG
CCGCTCAACAACTACCTCCACTGGTGCGGCCTCGGGATCTTCCACTCCGCCGTCGAGGTC
CATGGATCGGAGTACAGTTTTGGAGCTCATGATCACCCAACGAGTGGGGTTTTTGAGGTG
GAACCAAAGTGCTGCCCAGGGTTCATGTACAGATGTTCAATTTTCATAGGCCGTACGAGT
TTGAATCCCTTAGAATTTCGAGATTTCATTCAGAGAATGGCTTCAGAATACCATGGAGAT
ACTTATCACCTCATTTCCAAAAACTGTAACCACTTTACGGATGATCTCAGTACCAGATTG
ACAGGAAAACCGATTCCTGGCTGGGTTAACCGACCTGCGAAGCTAGGTGCCTTTTGCAAC
TGCCTTCTGCCAGAAAGCATGCGGTTGGAGTCAACTGGGACAAAGCACCTCGCGGACTGT
CATTTCTCAGATGATTCCCGCACATCCAGCAATGAGCATTTTGAAGATGAAGATCTTGAA
GACAAGCACCTGCTTTCACAATCTTCTGTTTCTGAAGATGCAATTGTAAAGGAAGTTCAC
AGGTGACAAACTGCTGAGGCTATACAGAATAATTTGGTGTGTAGTTTGTCATTCATTTTG
TACATTGTAATTCTGTATTCCAAAATTTAGTGCGCTCTTTGTATTCTAAGTTGATATTCA
TATTATTGTGGCCGGTTTATTGTCATGATTAATTTTGTTCATTCCATTTGTACAAACACT
GTAATACCCTACCTACTGAGGCTCCTTATAGGTAGTCTGGAAGTCACTCTGCATGTGTAC
TCTTAAGTCTTAAATTCGTTTCTTGT