Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os06t0560000-02
CDS Infomation	cds chromosome:IRGSP-1.0:6:21397104:21399315:1 gene:Os06g0560000 gene_biotype:protein_coding transcript_biotype:protein_coding description:Ferroportin1 family protein. (Os06t0560000-01);Ferroportin1 family protein. (Os06t0560000-02)
Sequence	ATGGCGAGTGATGGCCACCTCGCGGCGCCGCTCCTCGACGGCGGCGGCGGGGTGGACGAC GCGGCGCTTCTCCGGCGGCTCTACGTGGGGCACTTCCTGGCGAGGTGGGGCGCGAGGATG TGGGAGTTCTCGGTGGGGCTCTACATGATCCGAATCTGGCCGGGCTCGCTGTTGCTCACG GCGGTGTACGGCGTCGTGGAGGCCTCCGCCGTGGCGGCGCTGGGCCCCATCGTCGGCGCC GTCGTCGACAGGCTCGCATACCTGCAGGTGCTCAGGCTGTGGCTGCTGCTGCAGGGCGCG TCTTTCGTCGCCGCCGGCGTCTCCGTCACGGCGCTGCTCGTCTACGGCGCCCGGCTCGCC GCCGCGGGGTTCCCGGCGTTCGTGGCGCTCGTCGTCGTCACCAACGTCTCCGGCGCGCTC GCCGCGCTCTCCACCCTCGCTGGCACCATACTGATCGAGAGAGAATGGGTGGTGGTGATC GCCGGCGGGCAACCGGCGGCGGTGCTGACGGGGATCAACTCGGTGATCCGGCGGATCGAC CTGAGCTGCAAGCTGCTGGCGCCGGTGCTGTCCGGGTTCTTCATCAGCTTCGTGTCCATG GAGGCCTCCGCGGCGGCGCTGGCGGCGTGGAACCTCGCCGCCGTGTGGGTCCAGTACTGG CTCTTCGTCTCCGTCTACGCCGGCTTCCCGGCGCTCAGCGAGACCAGCCAGATCTCAAGA CGGCGCGCCGACGATGACGAGGCAGCGGCGGCGGCGCAGCCGCAGAAGGTGGAGCGGCTG TGGATGACGATGCTGCCGTGCTGGGAGTCGTGGGCGGTGTACGCGCGGCAGGAGGTGGTG CTCCCCGGCGTGGCGCTCGCGTTCCTCTACTTCACCGTGCTGAGCTTCGGGACGCTGATG ACGGCGACGCTGGACTGGGAGGGGATCCCGGCATACGTGATCAGCCTCGCCCGCGGCGTC AGCGCCGCCGTCGGCATCGCCGCGACGTGGGTGTACCCGGCGGCGCACGCCCGCGTGTCC ACGCTCCGCGCGGGCCTCTGGTCCATCTGGGCGCAGTGGTGCTGCCTCCTCGTCTGCGTC GCCTCCGTCTGGGCCGGCGGCGCCGCGCCATTGGCGTCGGCGTGGATGCTGATGGGCGGC GTGGCGGCGTCGCGGCTGGGGCTGTGGATGTTCGACCTAGCCGTGATGCAGCTGATGCAG GACGGCGTCCCGGAGAGCGACCGGTGCGTCGTCGGCGGCGTGCAGAACTCGCTGCAGTCC ATGTTCGACCTGCTCACCTACGTCATGGGCATCATCGTCTCCGACCCCAGGGATTTCGGC GAGCTGATCGTGCTGTCCTTCTTTCTCGTGACCTGCGCGGCGGCAATGTACACGATGCAT GTGTACCGGGTGAGGAAGCATCTGTTCCATCTCGACAGGATCCTGCCCAAGATGAACTGG ATCAAAGCTTCTTGA

Peptide Sequence

PEP ID	Os06t0560000-02
PEP Infomation	pep chromosome:IRGSP-1.0:6:21397104:21399315:1 gene:Os06g0560000 transcript:Os06t0560000-02 gene_biotype:protein_coding transcript_biotype:protein_coding description:Ferroportin1 family protein. (Os06t0560000-01);Ferroportin1 family protein. (Os06t0560000-02)
Sequence	MASDGHLAAPLLDGGGGVDDAALLRRLYVGHFLARWGARMWEFSVGLYMIRIWPGSLLLT AVYGVVEASAVAALGPIVGAVVDRLAYLQVLRLWLLLQGASFVAAGVSVTALLVYGARLA AAGFPAFVALVVVTNVSGALAALSTLAGTILIEREWVVVIAGGQPAAVLTGINSVIRRID LSCKLLAPVLSGFFISFVSMEASAAALAAWNLAAVWVQYWLFVSVYAGFPALSETSQISR RRADDDEAAAAAQPQKVERLWMTMLPCWESWAVYARQEVVLPGVALAFLYFTVLSFGTLM TATLDWEGIPAYVISLARGVSAAVGIAATWVYPAAHARVSTLRAGLWSIWAQWCCLLVCV ASVWAGGAAPLASAWMLMGGVAASRLGLWMFDLAVMQLMQDGVPESDRCVVGGVQNSLQS MFDLLTYVMGIIVSDPRDFGELIVLSFFLVTCAAAMYTMHVYRVRKHLFHLDRILPKMNW IKAS

Transcript Sequence

Transcript ID	Os06t0560000-02
Transcript Infomation	cdna chromosome:IRGSP-1.0:6:21397104:21399315:1 gene:Os06g0560000 gene_biotype:protein_coding transcript_biotype:protein_coding description:Ferroportin1 family protein. (Os06t0560000-01);Ferroportin1 family protein. (Os06t0560000-02)
Sequence	AATCTCTTCTTCACATCAATATCGGAGTGATCGATCAGTCTCGTCGCGGTTCGATCGATT GGCCTCTGATCCGTACATCTTCTTGTGTGATCGATCAAGAATCATTCAAGATTGCAAGGT GAGTAAGTATGGCGAGTGATGGCCACCTCGCGGCGCCGCTCCTCGACGGCGGCGGCGGGG TGGACGACGCGGCGCTTCTCCGGCGGCTCTACGTGGGGCACTTCCTGGCGAGGTGGGGCG CGAGGATGTGGGAGTTCTCGGTGGGGCTCTACATGATCCGAATCTGGCCGGGCTCGCTGT TGCTCACGGCGGTGTACGGCGTCGTGGAGGCCTCCGCCGTGGCGGCGCTGGGCCCCATCG TCGGCGCCGTCGTCGACAGGCTCGCATACCTGCAGGTGCTCAGGCTGTGGCTGCTGCTGC AGGGCGCGTCTTTCGTCGCCGCCGGCGTCTCCGTCACGGCGCTGCTCGTCTACGGCGCCC GGCTCGCCGCCGCGGGGTTCCCGGCGTTCGTGGCGCTCGTCGTCGTCACCAACGTCTCCG GCGCGCTCGCCGCGCTCTCCACCCTCGCTGGCACCATACTGATCGAGAGAGAATGGGTGG TGGTGATCGCCGGCGGGCAACCGGCGGCGGTGCTGACGGGGATCAACTCGGTGATCCGGC GGATCGACCTGAGCTGCAAGCTGCTGGCGCCGGTGCTGTCCGGGTTCTTCATCAGCTTCG TGTCCATGGAGGCCTCCGCGGCGGCGCTGGCGGCGTGGAACCTCGCCGCCGTGTGGGTCC AGTACTGGCTCTTCGTCTCCGTCTACGCCGGCTTCCCGGCGCTCAGCGAGACCAGCCAGA TCTCAAGACGGCGCGCCGACGATGACGAGGCAGCGGCGGCGGCGCAGCCGCAGAAGGTGG AGCGGCTGTGGATGACGATGCTGCCGTGCTGGGAGTCGTGGGCGGTGTACGCGCGGCAGG AGGTGGTGCTCCCCGGCGTGGCGCTCGCGTTCCTCTACTTCACCGTGCTGAGCTTCGGGA CGCTGATGACGGCGACGCTGGACTGGGAGGGGATCCCGGCATACGTGATCAGCCTCGCCC GCGGCGTCAGCGCCGCCGTCGGCATCGCCGCGACGTGGGTGTACCCGGCGGCGCACGCCC GCGTGTCCACGCTCCGCGCGGGCCTCTGGTCCATCTGGGCGCAGTGGTGCTGCCTCCTCG TCTGCGTCGCCTCCGTCTGGGCCGGCGGCGCCGCGCCATTGGCGTCGGCGTGGATGCTGA TGGGCGGCGTGGCGGCGTCGCGGCTGGGGCTGTGGATGTTCGACCTAGCCGTGATGCAGC TGATGCAGGACGGCGTCCCGGAGAGCGACCGGTGCGTCGTCGGCGGCGTGCAGAACTCGC TGCAGTCCATGTTCGACCTGCTCACCTACGTCATGGGCATCATCGTCTCCGACCCCAGGG ATTTCGGCGAGCTGATCGTGCTGTCCTTCTTTCTCGTGACCTGCGCGGCGGCAATGTACA CGATGCATGTGTACCGGGTGAGGAAGCATCTGTTCCATCTCGACAGGATCCTGCCCAAGA TGAACTGGATCAAAGCTTCTTGATATGGCATCCCGTGATCGATAATGATGATTCATCAGT GATTTTCTCCAGCAAATTAGTACTGATCAATGCTGGATACTGTACAATTATCTGCTTTGG TTTACTTCAATTTTAGACCTGTTCACTGGAACTTTTGCTCAAAAGATTTGTGGCATCTGG AGAAATGCCACATGTTCCATCCAACTGGGGCTTGAAGAATCTCCATGTAATTAACCTTAC AATAATATATAAGTACTCGCTTGATCCCATG