Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os06t0559400-02
CDS Infomation

cds chromosome:IRGSP-1.0:6:21372479:21374077:1 gene:Os06g0559400 gene_biotype:protein_coding transcript_biotype:protein_coding description:Conserved hypothetical protein. (Os06t0559400-01);Conserved hypothetical protein. (Os06t0559400-02)
Sequence

ATGGGCGGGATAGCTCGACGACGAGGAGGAGGAGATCAAGGTGGTGTTGCTGCTGCTGCC
GGCGGCGACGGCGAGGCGGCGGCGTCCGGGTTCTCCAGCGGCGATTCGTCGGCGACGACG
ACGCTGCGGTCGCCGGCGTCGTCGAGCCTGACCGACGATGGCGGCGAGGTGACGTCGTGG
ACGTCGGCTGACGGTGGTGGTGGTGGTGACTACTGCTCGTTTTCGTGTTCGTCGGAGTCG
GAGTTGGAGTTGGAGTCAGACGACGACGACGACGAGGAGGAGGAGGAGATGATGCAGCTG
GATGGTGGCGGGCACGCCGCCGGCGGGCCGCTCTACGAGCTGGCGGCGCCGCTGCTGGCG
CAGCTTCCTCTCAGGACAGGGCTATCCAAGTACTACCAAGGGAAGTCCCAATCCTTCACA
TCGCTCTGCAACGCCAGGTGCGTCCAAGACCTTGCAAAGAAGACAACCCCTTACATCACC
AGGATGAAGCTGCAGCTGCGCAGAGGCCATGGAGTCGTGGATCGGTTGTCGAATTCGCGT
CGCGCTCCAGGGCCCTGCAGCAAGACGATGGCGAAGAAGGCGACGAGGTGCTCGTCCGAT
CGATTGCTGTCAAGAGCAAGGGAGCACAAGCCTCTTCACAGCAGCAGCAGCACACCTGCA
CAACAGAGCAAGAAAGAGCTGTCAAGATGCTAG

Peptide Sequence

PEP ID

Os06t0559400-02
PEP Infomation

pep chromosome:IRGSP-1.0:6:21372479:21374077:1 gene:Os06g0559400 transcript:Os06t0559400-02 gene_biotype:protein_coding transcript_biotype:protein_coding description:Conserved hypothetical protein. (Os06t0559400-01);Conserved hypothetical protein. (Os06t0559400-02)
Sequence

MGGIARRRGGGDQGGVAAAAGGDGEAAASGFSSGDSSATTTLRSPASSSLTDDGGEVTSW
TSADGGGGGDYCSFSCSSESELELESDDDDDEEEEEMMQLDGGGHAAGGPLYELAAPLLA
QLPLRTGLSKYYQGKSQSFTSLCNARCVQDLAKKTTPYITRMKLQLRRGHGVVDRLSNSR
RAPGPCSKTMAKKATRCSSDRLLSRAREHKPLHSSSSTPAQQSKKELSRC

Transcript Sequence

Transcript ID

Os06t0559400-02
Transcript Infomation

cdna chromosome:IRGSP-1.0:6:21372479:21374077:1 gene:Os06g0559400 gene_biotype:protein_coding transcript_biotype:protein_coding description:Conserved hypothetical protein. (Os06t0559400-01);Conserved hypothetical protein. (Os06t0559400-02)
Sequence

AAGCTTCGATCGATCCATCGATCGATTGATCAAATCTTGTGTGATATAGCACTAGTTTGA
TGCGTGCGAGATGGGCGGGATAGCTCGACGACGAGGAGGAGGAGATCAAGGTGGTGTTGC
TGCTGCTGCCGGCGGCGACGGCGAGGCGGCGGCGTCCGGGTTCTCCAGCGGCGATTCGTC
GGCGACGACGACGCTGCGGTCGCCGGCGTCGTCGAGCCTGACCGACGATGGCGGCGAGGT
GACGTCGTGGACGTCGGCTGACGGTGGTGGTGGTGGTGACTACTGCTCGTTTTCGTGTTC
GTCGGAGTCGGAGTTGGAGTTGGAGTCAGACGACGACGACGACGAGGAGGAGGAGGAGAT
GATGCAGCTGGATGGTGGCGGGCACGCCGCCGGCGGGCCGCTCTACGAGCTGGCGGCGCC
GCTGCTGGCGCAGCTTCCTCTCAGGACAGGGCTATCCAAGTACTACCAAGGGAAGTCCCA
ATCCTTCACATCGCTCTGCAACGCCAGGTGCGTCCAAGACCTTGCAAAGAAGACAACCCC
TTACATCACCAGGATGAAGCTGCAGCTGCGCAGAGGCCATGGAGTCGTGGATCGGTTGTC
GAATTCGCGTCGCGCTCCAGGGCCCTGCAGCAAGACGATGGCGAAGAAGGCGACGAGGTG
CTCGTCCGATCGATTGCTGTCAAGAGCAAGGGAGCACAAGCCTCTTCACAGCAGCAGCAG
CACACCTGCACAACAGAGCAAGAAAGAGCTGTCAAGATGCTAGTTGAAAGGCAGTACAGG
GGTACTGAAAAAAAAATGGAGATGAGGTTTTTCAACAAAATGAACTCTTCAGCAATCAGC
ACTCAGCTGCACTGGAGCTAGAAATATAGAATGTCTCCAGGTCTCCTCCAAACGATGCTT
TCAGAAGGAAGTTTTGCTCAGTTTTCTTTTCTTCTGTGGATCATTGTGTCATTTTACTTG
ATAAAATGGCTGAGCCGATGTTAGATACATCATGATCAAGCCAACATAATCTGGAGACAT
TTCATCAAGTTTGTACATAGATGCAATATTCATAAGATATATTATTTTGTCTAATACATA
ATTATTTTGACTTTGGGCAAAGG