Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os06t0557100-02
CDS Infomation	cds chromosome:IRGSP-1.0:6:21255245:21258828:1 gene:Os06g0557100 gene_biotype:protein_coding transcript_biotype:protein_coding description:Serine/threonine protein kinase domain containing protein. (Os06t0557100-01);Serine/threonine protein kinase domain containing protein. (Os06t0557100-02)
Sequence	ATGTCGAACACCTATCTCCCCCTCCTCCCTGCTCTCGTCGCCGGCGTCCTCCTCCTCGCC GCCGGATGCGCCGCCGCCGCCGGCGACCGCGACACGCTCGTTGCCATCAGGAAAGGGTGG GGGAACCCGCGGCACCTCGCGTCGTGGGACCCCGCCTCGGCGGCGGCGGCGGACCACTGC AGCTGGGAAGGCGTGACCTGCTCTAATGCCACCACCGGCGGCGGCGGCGGCGCCGGCGTG GTGACGGAGCTGTCCCTGCACGACATGAACCTCACCGGGACGGTGCCCACGGCGGTGTGC GACCTCGCGAGCCTGACGCGGCTCGACCTCTCCAACAACCAGCTCACCGGCGCGTTCCCC GCCGCGGCGCTGTCCCGGTGCGCCCGCCTCCGGTTCCTCGACCTCGCCAACAACGCCCTC GACGGCGCCCTCCCGCAACACGTCGGCAGGTTGTCCCCGGCGATGGAGCACCTCAACCTG TCGTCGAATCGGCTCTCCGGCGCCGTGCCCCCCGAGGTGGCGGCGCTCCCGGCGCTCCGG TCGCTGCTCCTCGACACCAACCGGTTCACGGGGGCGTACCCAGCGGCGGAGATTGCCAAC CTCACCGCCCTCGAGCGCCTCACGCTGGCCGACAACGGGTTCGCGCCGGCGCCCGTGCCG CCCGCGTTCGCCAAGCTGACCAAGCTCACCTACCTCTGGATGTCCAAGATGAACATCACC GGCGAGATTCCGGAGGCGTTCTCCAGCCTCACGGAGCTGACGCTGCTCGACATGTCGGGG AACAAGCTCACCGGCGCGATTCCGGCGTGGGTGTTCAGGCACCAGAAGCTCGAGAGGCTC TACCTGTACGAGAACTCCCTCTCCGGCGAGCTGCCGCGCAACGTCACGACGGCGAACCTG GTCGAGATCGACCTGTCGTCGAACCAGCTCGGGGGCGAGATATCGGAGGACTTCGGCAAC CTCAAGAACCTCAGCTTGCTGTTCCTCTACTTCAACAAGGTCACCGGCGCCATCCCGGCG AGCATCGGGCGGCTCCCCAATCTCACCGACCTCCGGCTGTTCGGCAACGAGCTCTCCGGC GAGCTCCCGCCGGAGCTCGGGAAGAACTCGCCGCTCGCCAACTTCGAGGTCTCCAACAAC AACCTCTCCGGCGCGCTCCCGGAGACGCTCTGCGCCAACGGGAAGCTGTTCGACATTGTC GTCTTCAACAACAGCTTCTCCGGCGAGCTCCCGGCGAACCTCGGCGACTGCGTGCTGCTG AACAACCTCATGCTCTACAACAACCGCTTCACCGGCGACTTCCCGGAGAAGATTTGGTCG TTCCAGAAGCTGACCACGGTGATGATCCAGAACAACGGCTTCACCGGAGCTCTGCCCGCC GAGATATCCACCAACATCTCCCGCATCGAGATGGGGAACAACATGTTCTCCGGCTCTATC CCGACCTCGGCGACCAAGCTCACCGTGTTCCGGGCGGAGAACAACCTGCTCGCCGGCGAG CTCCCGGCCGACATGAGCAATCTCACCGACCTCACCGATTTTTCAGTGCCGGGCAACCGA ATATCTGGCTCCATACCCGCGTCGATCAGGCTGCTGGTGAAGCTCAACTCGCTCAACCTG AGCAGCAACCGGATCTCCGGCGTGATACCGCCGGCGAGCTTCGGGACGCTCCCGGCGCTG ACCATCCTCGATCTGTCCGGCAACGAGCTCACCGGCGACATACCTGCCGATTTGGGGTAC CTCAACTTCAACTCGCTCAACGTGTCGTCGAACCGGCTCACCGGCGAGGTGCCGCTCACG CTCCAGGGCGCGGCGTACGATCGCAGCTTCCTCGGCAACAGTCTCTGCGCCAGGCCGGGC TCCGGCACGAACCTCCCGACCTGCCCCGGTGGAGGCGGCGGCGGAGGCGGCCACGACGAG CTCTCCAAGGGCCTGATCGTCCTCTTCTCGATGCTCGCCGGCATTGTCCTCGTCGGCAGC GCCGGCATCGCGTGGCTGCTCCTCCGGCGGCGGAAGGACAGCCAGGACGTCACCGACTGG AAGATGACGCAGTTCACCCCGCTGGACTTCGCCGAGTCCGACGTGCTCGGCAACATCCGG GAGGAGAACGTCATCGGCAGCGGCGGGTCGGGCAAGGTGTACCGCATCCACCTCACCTCC CGCGGCGGCGGCGCCACCGCCACCGCCGGCAGGATGGTGGCCGTGAAGAAGATCTGGAAC GCGAGGAAGCTGGACGCGAAGCTGGACAAGGAGTTCGAGGCGGAGGTGACGGTGCTCGGC AACATCCGGCACAACAACATCGTCAAGCTGCTGTGCTGCATCTCCAGCCAGGACGCCAAG CTGCTGGTGTACGAGTACATGGAGAACGGCAGCCTCGACCGGTGGCTGCACCACCGCGAC CGCGACGGCGCGCCGGCGCCGCTGGACTGGCCGACGAGGCTGGCCATCGCCGTCGACGCC GCCAGGGGGCTCAGCTACATGCACCACGACTGCGCGCAGGCGATCGTGCACCGCGACGTC AAGTCCAGCAACATCCTGCTCGACCCGGAGTTCCAGGCCAAGATCGCCGACTTTGGCCTC GCCCGGATGCTCGTCAAGTCAGGCGAGCCTGAGTCCGTGTCGGCCATCGGCGGCACGTTT GGGTACATGGCGCCAGAGTATGGGTACAGCAAGAGGGTGAATGAGAAGGTGGACGTCTAC AGCTTCGGCGTCGTGTTGCTGGAGCTGACGACCGGCAAGGTCGCGAACGACGCCGCAGCC GACTTCTGCCTGGCCGAGTGGGCGTGGCGGCGGTACCAGAAAGGCCCTCCGTTCGATGAC GTCATCGACGCCGACATCCGGGAGCAGGCCAGTCTGCCGGACATCATGTCGGTGTTCACG CTCGGCGTGATCTGCACGGGGGAGAACCCGCCGGCGAGGCCGTCCATGAAGGAGGTCCTG CACCACCTCATCCGGTGCGACCGGATGTCGGCCCAGGGACCCGAGGCGTGCCAGCTGGAC TATGTCGACGGCGCCGCTCCGCTGCTGGAGGCGAAGAAGGGGAGCCGGCGGAGGAGCTCG GAGTCTGGCAGGTGGGACGACGACGACGACGATGACAGCGGCAATTTCGTGGTGCACGTT GTTTAG

Peptide Sequence

PEP ID	Os06t0557100-02
PEP Infomation	pep chromosome:IRGSP-1.0:6:21255245:21258828:1 gene:Os06g0557100 transcript:Os06t0557100-02 gene_biotype:protein_coding transcript_biotype:protein_coding description:Serine/threonine protein kinase domain containing protein. (Os06t0557100-01);Serine/threonine protein kinase domain containing protein. (Os06t0557100-02)
Sequence	MSNTYLPLLPALVAGVLLLAAGCAAAAGDRDTLVAIRKGWGNPRHLASWDPASAAAADHC SWEGVTCSNATTGGGGGAGVVTELSLHDMNLTGTVPTAVCDLASLTRLDLSNNQLTGAFP AAALSRCARLRFLDLANNALDGALPQHVGRLSPAMEHLNLSSNRLSGAVPPEVAALPALR SLLLDTNRFTGAYPAAEIANLTALERLTLADNGFAPAPVPPAFAKLTKLTYLWMSKMNIT GEIPEAFSSLTELTLLDMSGNKLTGAIPAWVFRHQKLERLYLYENSLSGELPRNVTTANL VEIDLSSNQLGGEISEDFGNLKNLSLLFLYFNKVTGAIPASIGRLPNLTDLRLFGNELSG ELPPELGKNSPLANFEVSNNNLSGALPETLCANGKLFDIVVFNNSFSGELPANLGDCVLL NNLMLYNNRFTGDFPEKIWSFQKLTTVMIQNNGFTGALPAEISTNISRIEMGNNMFSGSI PTSATKLTVFRAENNLLAGELPADMSNLTDLTDFSVPGNRISGSIPASIRLLVKLNSLNL SSNRISGVIPPASFGTLPALTILDLSGNELTGDIPADLGYLNFNSLNVSSNRLTGEVPLT LQGAAYDRSFLGNSLCARPGSGTNLPTCPGGGGGGGGHDELSKGLIVLFSMLAGIVLVGS AGIAWLLLRRRKDSQDVTDWKMTQFTPLDFAESDVLGNIREENVIGSGGSGKVYRIHLTS RGGGATATAGRMVAVKKIWNARKLDAKLDKEFEAEVTVLGNIRHNNIVKLLCCISSQDAK LLVYEYMENGSLDRWLHHRDRDGAPAPLDWPTRLAIAVDAARGLSYMHHDCAQAIVHRDV KSSNILLDPEFQAKIADFGLARMLVKSGEPESVSAIGGTFGYMAPEYGYSKRVNEKVDVY SFGVVLLELTTGKVANDAAADFCLAEWAWRRYQKGPPFDDVIDADIREQASLPDIMSVFT LGVICTGENPPARPSMKEVLHHLIRCDRMSAQGPEACQLDYVDGAAPLLEAKKGSRRRSS ESGRWDDDDDDDSGNFVVHVV

Transcript Sequence

Transcript ID	Os06t0557100-02
Transcript Infomation	cdna chromosome:IRGSP-1.0:6:21255245:21258828:1 gene:Os06g0557100 gene_biotype:protein_coding transcript_biotype:protein_coding description:Serine/threonine protein kinase domain containing protein. (Os06t0557100-01);Serine/threonine protein kinase domain containing protein. (Os06t0557100-02)
Sequence	ATCACTCCCCACCCCCAACCTCAGCTCGCCGCTCGCGAGGAAACCGGCTCCGCGACGAAA AGAATAATGTCGAACACCTATCTCCCCCTCCTCCCTGCTCTCGTCGCCGGCGTCCTCCTC CTCGCCGCCGGATGCGCCGCCGCCGCCGGCGACCGCGACACGCTCGTTGCCATCAGGAAA GGGTGGGGGAACCCGCGGCACCTCGCGTCGTGGGACCCCGCCTCGGCGGCGGCGGCGGAC CACTGCAGCTGGGAAGGCGTGACCTGCTCTAATGCCACCACCGGCGGCGGCGGCGGCGCC GGCGTGGTGACGGAGCTGTCCCTGCACGACATGAACCTCACCGGGACGGTGCCCACGGCG GTGTGCGACCTCGCGAGCCTGACGCGGCTCGACCTCTCCAACAACCAGCTCACCGGCGCG TTCCCCGCCGCGGCGCTGTCCCGGTGCGCCCGCCTCCGGTTCCTCGACCTCGCCAACAAC GCCCTCGACGGCGCCCTCCCGCAACACGTCGGCAGGTTGTCCCCGGCGATGGAGCACCTC AACCTGTCGTCGAATCGGCTCTCCGGCGCCGTGCCCCCCGAGGTGGCGGCGCTCCCGGCG CTCCGGTCGCTGCTCCTCGACACCAACCGGTTCACGGGGGCGTACCCAGCGGCGGAGATT GCCAACCTCACCGCCCTCGAGCGCCTCACGCTGGCCGACAACGGGTTCGCGCCGGCGCCC GTGCCGCCCGCGTTCGCCAAGCTGACCAAGCTCACCTACCTCTGGATGTCCAAGATGAAC ATCACCGGCGAGATTCCGGAGGCGTTCTCCAGCCTCACGGAGCTGACGCTGCTCGACATG TCGGGGAACAAGCTCACCGGCGCGATTCCGGCGTGGGTGTTCAGGCACCAGAAGCTCGAG AGGCTCTACCTGTACGAGAACTCCCTCTCCGGCGAGCTGCCGCGCAACGTCACGACGGCG AACCTGGTCGAGATCGACCTGTCGTCGAACCAGCTCGGGGGCGAGATATCGGAGGACTTC GGCAACCTCAAGAACCTCAGCTTGCTGTTCCTCTACTTCAACAAGGTCACCGGCGCCATC CCGGCGAGCATCGGGCGGCTCCCCAATCTCACCGACCTCCGGCTGTTCGGCAACGAGCTC TCCGGCGAGCTCCCGCCGGAGCTCGGGAAGAACTCGCCGCTCGCCAACTTCGAGGTCTCC AACAACAACCTCTCCGGCGCGCTCCCGGAGACGCTCTGCGCCAACGGGAAGCTGTTCGAC ATTGTCGTCTTCAACAACAGCTTCTCCGGCGAGCTCCCGGCGAACCTCGGCGACTGCGTG CTGCTGAACAACCTCATGCTCTACAACAACCGCTTCACCGGCGACTTCCCGGAGAAGATT TGGTCGTTCCAGAAGCTGACCACGGTGATGATCCAGAACAACGGCTTCACCGGAGCTCTG CCCGCCGAGATATCCACCAACATCTCCCGCATCGAGATGGGGAACAACATGTTCTCCGGC TCTATCCCGACCTCGGCGACCAAGCTCACCGTGTTCCGGGCGGAGAACAACCTGCTCGCC GGCGAGCTCCCGGCCGACATGAGCAATCTCACCGACCTCACCGATTTTTCAGTGCCGGGC AACCGAATATCTGGCTCCATACCCGCGTCGATCAGGCTGCTGGTGAAGCTCAACTCGCTC AACCTGAGCAGCAACCGGATCTCCGGCGTGATACCGCCGGCGAGCTTCGGGACGCTCCCG GCGCTGACCATCCTCGATCTGTCCGGCAACGAGCTCACCGGCGACATACCTGCCGATTTG GGGTACCTCAACTTCAACTCGCTCAACGTGTCGTCGAACCGGCTCACCGGCGAGGTGCCG CTCACGCTCCAGGGCGCGGCGTACGATCGCAGCTTCCTCGGCAACAGTCTCTGCGCCAGG CCGGGCTCCGGCACGAACCTCCCGACCTGCCCCGGTGGAGGCGGCGGCGGAGGCGGCCAC GACGAGCTCTCCAAGGGCCTGATCGTCCTCTTCTCGATGCTCGCCGGCATTGTCCTCGTC GGCAGCGCCGGCATCGCGTGGCTGCTCCTCCGGCGGCGGAAGGACAGCCAGGACGTCACC GACTGGAAGATGACGCAGTTCACCCCGCTGGACTTCGCCGAGTCCGACGTGCTCGGCAAC ATCCGGGAGGAGAACGTCATCGGCAGCGGCGGGTCGGGCAAGGTGTACCGCATCCACCTC ACCTCCCGCGGCGGCGGCGCCACCGCCACCGCCGGCAGGATGGTGGCCGTGAAGAAGATC TGGAACGCGAGGAAGCTGGACGCGAAGCTGGACAAGGAGTTCGAGGCGGAGGTGACGGTG CTCGGCAACATCCGGCACAACAACATCGTCAAGCTGCTGTGCTGCATCTCCAGCCAGGAC GCCAAGCTGCTGGTGTACGAGTACATGGAGAACGGCAGCCTCGACCGGTGGCTGCACCAC CGCGACCGCGACGGCGCGCCGGCGCCGCTGGACTGGCCGACGAGGCTGGCCATCGCCGTC GACGCCGCCAGGGGGCTCAGCTACATGCACCACGACTGCGCGCAGGCGATCGTGCACCGC GACGTCAAGTCCAGCAACATCCTGCTCGACCCGGAGTTCCAGGCCAAGATCGCCGACTTT GGCCTCGCCCGGATGCTCGTCAAGTCAGGCGAGCCTGAGTCCGTGTCGGCCATCGGCGGC ACGTTTGGGTACATGGCGCCAGAGTATGGGTACAGCAAGAGGGTGAATGAGAAGGTGGAC GTCTACAGCTTCGGCGTCGTGTTGCTGGAGCTGACGACCGGCAAGGTCGCGAACGACGCC GCAGCCGACTTCTGCCTGGCCGAGTGGGCGTGGCGGCGGTACCAGAAAGGCCCTCCGTTC GATGACGTCATCGACGCCGACATCCGGGAGCAGGCCAGTCTGCCGGACATCATGTCGGTG TTCACGCTCGGCGTGATCTGCACGGGGGAGAACCCGCCGGCGAGGCCGTCCATGAAGGAG GTCCTGCACCACCTCATCCGGTGCGACCGGATGTCGGCCCAGGGACCCGAGGCGTGCCAG CTGGACTATGTCGACGGCGCCGCTCCGCTGCTGGAGGCGAAGAAGGGGAGCCGGCGGAGG AGCTCGGAGTCTGGCAGGTGGGACGACGACGACGACGATGACAGCGGCAATTTCGTGGTG CACGTTGTTTAGGGGGCAATCCCGGTGTGCACTAGCACTGTAGAGCGAGTACATAGGTAG AGGAGCTCATCCATGATCCATGGTGGAGCTTTTGCAGAGGAGTTTTTCTCTGATGACGTG GCAGCTCGGAAAACATGAGCCCTTCAGATCTCAGATTGCAGCAGTAAGGTAAATATCCAT CCTGCAATCTGTATGTAACATAATCAAGATGTTTAACATGTAATCTTGTAACTGTATC