Gene sequences

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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os06t0556000-01
CDS Infomation	cds chromosome:IRGSP-1.0:6:21185223:21192033:1 gene:Os06g0556000 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:amino acid permease 12A, amino acid permease 3, amino acid/auxin permease 3 description:Amino acid permease, Transport of amino acids (Os06t0556000-01)
Sequence	ATGGCGAAGGACGTGGAGATGGCGGTGCGGAACGGAGACGGCGGCGGCGGCGGCGGCTAC TACGCCACCCACCCGCACGGCGGCGCCGGCGGCGAGGACGTCGACGACGACGGCAAGCAG CGGCGAACCGGTAACGTATGGACGGCGAGCGCGCACATCATCACGGCGGTGATCGGCTCC GGCGTGCTCTCTCTCGCATGGGCAACGGCGCAGCTCGGCTGGGTGGTCGGGCCGGTGACT CTGATGCTCTTCGCCCTCATCACGTACTACACCTCTGGGCTCCTCGCCGACTGCTACCGC ACTGGCGATCCGGTCAGCGGCAAGCGCAACTACACCTACATGGATGCCGTTGCGGCCTAC TTAGGTGGCTGGCAAGTCTGGTCCTGTGGTGTTTTCCAATATGTCAACCTGGTTGGGACA GCAATTGGGTACACAATCACAGCATCCATCAGCGCAGCGGCTGTGCACAAGGCCAACTGC TACCACAAGAACGGCCACGATGCCGATTGCGGTGTCTACGACACCACGTACATGATCGTC TTTGGAGTCGTCCAGATCTTCTTCTCCATGCTGCCCAACTTCAGTGACCTCTCATGGCTT TCCATCCTCGCCGCGGTCATGTCATTCTCATACTCGACCATTGCCGTTGGCCTCTCGCTT GCGCGAACAATATCAGGTGCTACTGGTAAGACTACTCTGACTGGCGTTGAGGTTGGAGTT GACGTCACTTCAGCCCAGAAGATCTGGCTCGCGTTCCAAGCGCTCGGTGACATCGCGTTC GCCTACTCCTACTCCATGATCCTTATAGAAATTCAGGACACGGTGAAGTCTCCACCGGCG GAGAACAAGACGATGAAGAAGGCAACGCTGCTGGGGGTGTCGACCACGACGGCGTTCTAC ATGCTGTGCGGGTGCCTGGGGTACGCGGCGTTCGGGAACGCGGCGCCGGGGAACATGCTC ACCGGGTTCGGCTTCTACGAGCCCTACTGGCTGATCGACTTCGCCAACGTCTGCATCGTG GTCCACCTGGTCGGCGCCTACCAGGTGTTCTGCCAGCCCATCTTCGCCGCCGTCGAGACG TTCGCCGCCAGGCGGTGGCCGGGCTCGGAGTTCATCACCCGGGAGCGCCCCGTCGTGGCC GGCAGGTCGTTCAGCGTCAACATGTTCAGGCTGACGTGGCGGACGGCGTTCGTGGTCGTC AGCACGGTGCTCGCCATCGTGATGCCCTTCTTCAACGACATCCTGGGCTTCCTCGGCGCC GTCGGGTTCTGGCCGCTGACGGTGTACTACCCGGTGGAGATGTACATCCGGCAGCGGCGG ATACAGCGGTACACGTCCAGGTGGGTGGCGCTGCAGACGCTCAGCCTCCTCTGCTTCCTC GTCTCGCTCGCCTCCGCCGTCGCCTCCATCGAGGGCGTCAGCGAGTCGCTCAAGCACTAC GTCCCCTTCAAGACCAAGTCGTGA

Peptide Sequence

PEP ID	Os06t0556000-01
PEP Infomation	pep chromosome:IRGSP-1.0:6:21185223:21192033:1 gene:Os06g0556000 transcript:Os06t0556000-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:amino acid permease 12A, amino acid permease 3, amino acid/auxin permease 3 description:Amino acid permease, Transport of amino acids (Os06t0556000-01)
Sequence	MAKDVEMAVRNGDGGGGGGYYATHPHGGAGGEDVDDDGKQRRTGNVWTASAHIITAVIGS GVLSLAWATAQLGWVVGPVTLMLFALITYYTSGLLADCYRTGDPVSGKRNYTYMDAVAAY LGGWQVWSCGVFQYVNLVGTAIGYTITASISAAAVHKANCYHKNGHDADCGVYDTTYMIV FGVVQIFFSMLPNFSDLSWLSILAAVMSFSYSTIAVGLSLARTISGATGKTTLTGVEVGV DVTSAQKIWLAFQALGDIAFAYSYSMILIEIQDTVKSPPAENKTMKKATLLGVSTTTAFY MLCGCLGYAAFGNAAPGNMLTGFGFYEPYWLIDFANVCIVVHLVGAYQVFCQPIFAAVET FAARRWPGSEFITRERPVVAGRSFSVNMFRLTWRTAFVVVSTVLAIVMPFFNDILGFLGA VGFWPLTVYYPVEMYIRQRRIQRYTSRWVALQTLSLLCFLVSLASAVASIEGVSESLKHY VPFKTKS

Transcript Sequence

Transcript ID	Os06t0556000-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:6:21185223:21192033:1 gene:Os06g0556000 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:amino acid permease 12A, amino acid permease 3, amino acid/auxin permease 3 description:Amino acid permease, Transport of amino acids (Os06t0556000-01)
Sequence	GCATCGCATCCTCTCCCCACACAATCCCCACCCGGCCTAGCGAGCGAGAGAGAGGGAAGG GTTGCGACTTGCGACTCGCGAGCGGCGAGATGGCGAAGGACGTGGAGATGGCGGTGCGGA ACGGAGACGGCGGCGGCGGCGGCGGCTACTACGCCACCCACCCGCACGGCGGCGCCGGCG GCGAGGACGTCGACGACGACGGCAAGCAGCGGCGAACCGGTAACGTATGGACGGCGAGCG CGCACATCATCACGGCGGTGATCGGCTCCGGCGTGCTCTCTCTCGCATGGGCAACGGCGC AGCTCGGCTGGGTGGTCGGGCCGGTGACTCTGATGCTCTTCGCCCTCATCACGTACTACA CCTCTGGGCTCCTCGCCGACTGCTACCGCACTGGCGATCCGGTCAGCGGCAAGCGCAACT ACACCTACATGGATGCCGTTGCGGCCTACTTAGGTGGCTGGCAAGTCTGGTCCTGTGGTG TTTTCCAATATGTCAACCTGGTTGGGACAGCAATTGGGTACACAATCACAGCATCCATCA GCGCAGCGGCTGTGCACAAGGCCAACTGCTACCACAAGAACGGCCACGATGCCGATTGCG GTGTCTACGACACCACGTACATGATCGTCTTTGGAGTCGTCCAGATCTTCTTCTCCATGC TGCCCAACTTCAGTGACCTCTCATGGCTTTCCATCCTCGCCGCGGTCATGTCATTCTCAT ACTCGACCATTGCCGTTGGCCTCTCGCTTGCGCGAACAATATCAGGTGCTACTGGTAAGA CTACTCTGACTGGCGTTGAGGTTGGAGTTGACGTCACTTCAGCCCAGAAGATCTGGCTCG CGTTCCAAGCGCTCGGTGACATCGCGTTCGCCTACTCCTACTCCATGATCCTTATAGAAA TTCAGGACACGGTGAAGTCTCCACCGGCGGAGAACAAGACGATGAAGAAGGCAACGCTGC TGGGGGTGTCGACCACGACGGCGTTCTACATGCTGTGCGGGTGCCTGGGGTACGCGGCGT TCGGGAACGCGGCGCCGGGGAACATGCTCACCGGGTTCGGCTTCTACGAGCCCTACTGGC TGATCGACTTCGCCAACGTCTGCATCGTGGTCCACCTGGTCGGCGCCTACCAGGTGTTCT GCCAGCCCATCTTCGCCGCCGTCGAGACGTTCGCCGCCAGGCGGTGGCCGGGCTCGGAGT TCATCACCCGGGAGCGCCCCGTCGTGGCCGGCAGGTCGTTCAGCGTCAACATGTTCAGGC TGACGTGGCGGACGGCGTTCGTGGTCGTCAGCACGGTGCTCGCCATCGTGATGCCCTTCT TCAACGACATCCTGGGCTTCCTCGGCGCCGTCGGGTTCTGGCCGCTGACGGTGTACTACC CGGTGGAGATGTACATCCGGCAGCGGCGGATACAGCGGTACACGTCCAGGTGGGTGGCGC TGCAGACGCTCAGCCTCCTCTGCTTCCTCGTCTCGCTCGCCTCCGCCGTCGCCTCCATCG AGGGCGTCAGCGAGTCGCTCAAGCACTACGTCCCCTTCAAGACCAAGTCGTGATCCCGAT CACGACGGCCTTTTTTTTTTGCTTTTGCATCCTGATGAAAAAAGATTTCAGAAACATATG CACAACAAATGCCGGAAGTTAGCCAAGAGTTTGGTCACCAGCTCGGTGCGTTGGTCGGTC AGGAGGAGGAGGGTTCAACTTGTGTAGGTTAAGAAATGCTAGAGAGTATGGAGACCATCT TCGATTGCTGCTCATGTATAGAAAAAAGAGGAAGCTTCGTATTCATGTAATGAATCGGAA TGTTTAACAAACAAGGCTTGTTCTGAACTCTTCTCAGGGACAGGCATGGATAACAGATTA AAGATAAATGAATGTGTTAGACAAGGGC