Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os06t0555500-02
CDS Infomation	cds chromosome:IRGSP-1.0:6:21167583:21171514:-1 gene:Os06g0555500 gene_biotype:protein_coding transcript_biotype:protein_coding description:Initiator tRNA phosphoribosyl transferase family protein. (Os06t0555500-01);Initiator tRNA phosphoribosyl transferase family protein. (Os06t0555500-02)
Sequence	ATGGCGGCGGCGGCGGCGTCGTCGGAGTCAGCGGATGCCGCCGCCGCTGGGCCGTCGACG CTGAGCATCTACAAGGCGGCGCGGCGCATCAAGCGGCGGGAGAGCACGCTGTACAACGCG CTGCGGAGCGTGGCGGACGACGCCGCGTTCGTGGCGGAGATCGCGGCGCTGTGGCCGGCG CTGCCGCTGGTCGCCAACCTCCGCTGCGGGCTCTGGTACTTGCCGCCCCGCGCCGTCGCC GCCACCTGCTACTTCAAGTCCACCGATGGGCACGCGGGCAACTGGGCCTTCTCCACCGCC CGCCTCAACCTCCACCTCGCCCTCCTCGCTGGGGAGAGAGGAGGGTGCATAATTGTTGAT TCAACAAGGAGAGGGAAACGTTTCCCTGACAGCATGTCAAAGACCATACCCATTTGGTGT TGTGTCCTCAACCGAGCAATTGAGAGGTATCGGCTGCAGACTAACAACAAGTCAGCTGCT GTAGCCAACAAAGACGCTGAAAAGATCTCTGAATCATCAAACTGGGATAACTCAGTGCAT CTTCCTGTATGGGTTCTAGAGACTGAGAAAAATGCTATAGAGGGGCGTATCGAGGAATGG ACAACCCAATTTGAATCATGTGGTGCAGACATTCGTTCTCTTGCGTTAAGTTTGAAGAAA CCACTACGTCCATTGTGGATATCACAAAGGACACGGATATGGTTAAATGAAGTTCCAGAG CTTGAATCATGGGATTTCACCCCTATCATATTAGTTTCAGCATCTGCATCTGGTGCAGTA GCTACACAAAGGATGACTTCAGAGTTCAGCTGGCACTATATTCCTGGAGCTGGAGATGAT GAAGAGAGTTGGGCACGTGGTCTCACTCCTACATTATTCTGGAAGCACTCATATGATCTG CTTGATGGTGGACCAGACCTTTGTAATCAGTTAGTTGCAGATATTGTTGAAAAAGATAGG GTCTATCGTGCACAGAGAGGCGAATATTCTCCCCAAATTACAGCTAAGCCTTTGAAGTGT TCAAGCCATGATGGTCCTTTCAGTAATGGTGATCATACAAGTATTGTGCAACCAATGGAC TCGGATCCTCCTACCGTTACTGCTATGGACAAACAAAATTCCAGTGATGGCCATATACTC TTCTGGATTGGGACATCAAACCTTGCAGTAGCATCAACTCTCCAAGTTGGAGATTCCTTA GCTGAAGTGGATTGTATACTGAACTGTGACAGCACATCAAATTTACCTTTGACTTCATCA GAGAATTCTTACCTTGAACTACCTATGGTGGGATCAAAGGACGACCGGTTTTCGTTGATG AAAAACCTTCCAAAAGCAGTTAGCTTTGCAAACAGGAATTTGATAGCAGGGAAGAAGCTA CTAATATGCTGTCAAAATGGAGAGGATATAAGCATCTGTGTGGCCTTGGCGATAATTACA CGATTATTTGATTGCGATGGATTCTTTGATCATGGCAATTCATTTCTGAAAGGAGACGTC ACGAAGTTGGAGATGAGGAAGAGGCTGGTTTTTGTTTGCAAATATGCTGTTAATGCAAGA CCATCTAGAGGAAACTTGAAGCAGGTCTATGGTTTCCTTTGCAGCGAGAAGGAACAGTTT TCTTGTTTGACGTAG

Peptide Sequence

PEP ID	Os06t0555500-02
PEP Infomation	pep chromosome:IRGSP-1.0:6:21167583:21171514:-1 gene:Os06g0555500 transcript:Os06t0555500-02 gene_biotype:protein_coding transcript_biotype:protein_coding description:Initiator tRNA phosphoribosyl transferase family protein. (Os06t0555500-01);Initiator tRNA phosphoribosyl transferase family protein. (Os06t0555500-02)
Sequence	MAAAAASSESADAAAAGPSTLSIYKAARRIKRRESTLYNALRSVADDAAFVAEIAALWPA LPLVANLRCGLWYLPPRAVAATCYFKSTDGHAGNWAFSTARLNLHLALLAGERGGCIIVD STRRGKRFPDSMSKTIPIWCCVLNRAIERYRLQTNNKSAAVANKDAEKISESSNWDNSVH LPVWVLETEKNAIEGRIEEWTTQFESCGADIRSLALSLKKPLRPLWISQRTRIWLNEVPE LESWDFTPIILVSASASGAVATQRMTSEFSWHYIPGAGDDEESWARGLTPTLFWKHSYDL LDGGPDLCNQLVADIVEKDRVYRAQRGEYSPQITAKPLKCSSHDGPFSNGDHTSIVQPMD SDPPTVTAMDKQNSSDGHILFWIGTSNLAVASTLQVGDSLAEVDCILNCDSTSNLPLTSS ENSYLELPMVGSKDDRFSLMKNLPKAVSFANRNLIAGKKLLICCQNGEDISICVALAIIT RLFDCDGFFDHGNSFLKGDVTKLEMRKRLVFVCKYAVNARPSRGNLKQVYGFLCSEKEQF SCLT

Transcript Sequence

Transcript ID	Os06t0555500-02
Transcript Infomation	cdna chromosome:IRGSP-1.0:6:21167583:21171514:-1 gene:Os06g0555500 gene_biotype:protein_coding transcript_biotype:protein_coding description:Initiator tRNA phosphoribosyl transferase family protein. (Os06t0555500-01);Initiator tRNA phosphoribosyl transferase family protein. (Os06t0555500-02)
Sequence	CTCTCTCTTTCTCGTCTCTCCAATGGCGGCGGCGGCGGCGTCGTCGGAGTCAGCGGATGC CGCCGCCGCTGGGCCGTCGACGCTGAGCATCTACAAGGCGGCGCGGCGCATCAAGCGGCG GGAGAGCACGCTGTACAACGCGCTGCGGAGCGTGGCGGACGACGCCGCGTTCGTGGCGGA GATCGCGGCGCTGTGGCCGGCGCTGCCGCTGGTCGCCAACCTCCGCTGCGGGCTCTGGTA CTTGCCGCCCCGCGCCGTCGCCGCCACCTGCTACTTCAAGTCCACCGATGGGCACGCGGG CAACTGGGCCTTCTCCACCGCCCGCCTCAACCTCCACCTCGCCCTCCTCGCTGGGGAGAG AGGAGGGTGCATAATTGTTGATTCAACAAGGAGAGGGAAACGTTTCCCTGACAGCATGTC AAAGACCATACCCATTTGGTGTTGTGTCCTCAACCGAGCAATTGAGAGGTATCGGCTGCA GACTAACAACAAGTCAGCTGCTGTAGCCAACAAAGACGCTGAAAAGATCTCTGAATCATC AAACTGGGATAACTCAGTGCATCTTCCTGTATGGGTTCTAGAGACTGAGAAAAATGCTAT AGAGGGGCGTATCGAGGAATGGACAACCCAATTTGAATCATGTGGTGCAGACATTCGTTC TCTTGCGTTAAGTTTGAAGAAACCACTACGTCCATTGTGGATATCACAAAGGACACGGAT ATGGTTAAATGAAGTTCCAGAGCTTGAATCATGGGATTTCACCCCTATCATATTAGTTTC AGCATCTGCATCTGGTGCAGTAGCTACACAAAGGATGACTTCAGAGTTCAGCTGGCACTA TATTCCTGGAGCTGGAGATGATGAAGAGAGTTGGGCACGTGGTCTCACTCCTACATTATT CTGGAAGCACTCATATGATCTGCTTGATGGTGGACCAGACCTTTGTAATCAGTTAGTTGC AGATATTGTTGAAAAAGATAGGGTCTATCGTGCACAGAGAGGCGAATATTCTCCCCAAAT TACAGCTAAGCCTTTGAAGTGTTCAAGCCATGATGGTCCTTTCAGTAATGGTGATCATAC AAGTATTGTGCAACCAATGGACTCGGATCCTCCTACCGTTACTGCTATGGACAAACAAAA TTCCAGTGATGGCCATATACTCTTCTGGATTGGGACATCAAACCTTGCAGTAGCATCAAC TCTCCAAGTTGGAGATTCCTTAGCTGAAGTGGATTGTATACTGAACTGTGACAGCACATC AAATTTACCTTTGACTTCATCAGAGAATTCTTACCTTGAACTACCTATGGTGGGATCAAA GGACGACCGGTTTTCGTTGATGAAAAACCTTCCAAAAGCAGTTAGCTTTGCAAACAGGAA TTTGATAGCAGGGAAGAAGCTACTAATATGCTGTCAAAATGGAGAGGATATAAGCATCTG TGTGGCCTTGGCGATAATTACACGATTATTTGATTGCGATGGATTCTTTGATCATGGCAA TTCATTTCTGAAAGGAGACGTCACGAAGTTGGAGATGAGGAAGAGGCTGGTTTTTGTTTG CAAATATGCTGTTAATGCAAGACCATCTAGAGGAAACTTGAAGCAGGTCTATGGTTTCCT TTGCAGCGAGAAGGAACAGTTTTCTTGTTTGACGTAGTTTATTTACGTCTAGTCTTGTGG ATCCTGATCAGTTGTTTCCTTTCCTATCCCCTGCAAGATGCATCTATGTGTTCCGATCAG TTAGGGAAGCTCTGGTTTCTGAGTTTTTCATGTCAACTGATGAACTGCTAGTGTATATGG GGAACCAATAGTCGCAAATTGCCCTTGGGATTTCACTGACAAACAACCTGGAGTTGATCT CATACCAGGTTAATCGACAAACTGGCACTGCTTATTAACCTGTTAATGATACGACGGTGG TTTCTGTAAAATCATCCCAGTGGGACGATTTGCAACAGTGGATGAGAACTTGCAGTATTA TTAGGACAGTACCGTTCCTAATGTTCAAGCAACAC