Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os06t0554300-01
CDS Infomation

cds chromosome:IRGSP-1.0:6:21066262:21069848:-1 gene:Os06g0554300 gene_biotype:protein_coding transcript_biotype:protein_coding description:Conserved hypothetical protein. (Os06t0554300-01)
Sequence

ATGCTTCATCATTCGAATAGCCGGCACCAAAGGAACAGAGGATCAAGAGTCAAAACATTA
CTCCAGGCTACCTTACTTCTAGGTGTTGTTGTCTGGCTTATGTACCAGGTGAAACATTCC
TATGATAAGAAAAATGAGTACTTGGAAGATGCTGAGAACCAGCTTGCCCATGATGATAGA
AGCATGTTCCAGGGGAGGAAAGAAAGGGGAGGTAGTTATGGTGATGGCATTCTGGAAAAG
GGTGGGGAGAACCCTGATGTAGTAAGCAAACCAGACGAAGAGAACATTGGAGAAACTGTG
TTTGAGAAAGACAATACTGACTCTCATGATGATGATATAAGAAACACTGACAGATCAAAA
GCTGGTGAAGGGCATGGCAGTAGTGCAGATGGGAATACAGAAGCTAATAGTAATGATGAG
GATGGAACGACCAATCACTCAGAAGGAGAGAAGAGTGACGCTGAGTCCAATTCATCTGAC
GCTGAGAGTAAAGGTGAAGACCATTCAACTGGAGATGATATGCCCCAAAGCAATACTGTC
CTAGAGGAAAGCAGTGCAGAGACGAACAGAATGCCCCATGAAGAAGTTGCACATGGTGAT
GAATCTACTAATGAAGATCAGTCCAATGTGAAAAGTGACGGATCTAATGAAGAGGAAGCT
GAGAAAAAAGAGGCAGTGGATTCTCAAAATGCTTCTGAATCTCTGTCCGATGATGCGAAG
GGTGGAACAGATGATGAGCATTCCAGTGGAACTCTTCCTGATGAAACAGGTAATCTACCA
TCAGGGCAGAATGAGAACTCACAAAGTGATGCGACTTCCACCACATCTGATGCTTCTAGC
GAGGCTGTTCACATTGAGACTGGATCTGAGAATGAAGATGCAGCAAAATCATCTGGGACT
GCATCTGGTGATGATGACAAGGGCTCAGCCAATGAGGCATCTGATTCAAACGAAACAAAA
TCTGATGAAGGCAATGTGGCAGCAGAAGTTTCTAATGACCAGGCTGCAAACACGGAGGCA
GGGAACTCCCAAGAAGCGTCTGCTGCAGAAGCTGCAAATGGCTCTTCAGAAGAGACCAAG
CCTGTGGAGAACCAGAATGATGGGAATACAGAGTCGTCTAACAATGGTGAGCAGGTGGAT
ATCAAGATGGAAACCAGTGCTTCCACCAATGCCGAGCAGAAGGAATCTCAAGTCGGCGAT
GGCAGCTCTGGGTCGAACGGCTCAAATGACAGTGGCGCTAAACAGACTGGCACGACTGAA
ACCCAGTGA

Peptide Sequence

PEP ID

Os06t0554300-01
PEP Infomation

pep chromosome:IRGSP-1.0:6:21066262:21069848:-1 gene:Os06g0554300 transcript:Os06t0554300-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Conserved hypothetical protein. (Os06t0554300-01)
Sequence

MLHHSNSRHQRNRGSRVKTLLQATLLLGVVVWLMYQVKHSYDKKNEYLEDAENQLAHDDR
SMFQGRKERGGSYGDGILEKGGENPDVVSKPDEENIGETVFEKDNTDSHDDDIRNTDRSK
AGEGHGSSADGNTEANSNDEDGTTNHSEGEKSDAESNSSDAESKGEDHSTGDDMPQSNTV
LEESSAETNRMPHEEVAHGDESTNEDQSNVKSDGSNEEEAEKKEAVDSQNASESLSDDAK
GGTDDEHSSGTLPDETGNLPSGQNENSQSDATSTTSDASSEAVHIETGSENEDAAKSSGT
ASGDDDKGSANEASDSNETKSDEGNVAAEVSNDQAANTEAGNSQEASAAEAANGSSEETK
PVENQNDGNTESSNNGEQVDIKMETSASTNAEQKESQVGDGSSGSNGSNDSGAKQTGTTE
TQ

Transcript Sequence

Transcript ID

Os06t0554300-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:6:21066262:21069848:-1 gene:Os06g0554300 gene_biotype:protein_coding transcript_biotype:protein_coding description:Conserved hypothetical protein. (Os06t0554300-01)
Sequence

AGTCCACCCCCAGTCGCCTCCCGCTTCCCTCCGCCGCCTTCCGCCGCGATCCCCATCCCG
CAGCTGCCGTAAACATGCTTCATCATTCGAATAGCCGGCACCAAAGGAACAGAGGATCAA
GAGTCAAAACATTACTCCAGGCTACCTTACTTCTAGGTGTTGTTGTCTGGCTTATGTACC
AGGTGAAACATTCCTATGATAAGAAAAATGAGTACTTGGAAGATGCTGAGAACCAGCTTG
CCCATGATGATAGAAGCATGTTCCAGGGGAGGAAAGAAAGGGGAGGTAGTTATGGTGATG
GCATTCTGGAAAAGGGTGGGGAGAACCCTGATGTAGTAAGCAAACCAGACGAAGAGAACA
TTGGAGAAACTGTGTTTGAGAAAGACAATACTGACTCTCATGATGATGATATAAGAAACA
CTGACAGATCAAAAGCTGGTGAAGGGCATGGCAGTAGTGCAGATGGGAATACAGAAGCTA
ATAGTAATGATGAGGATGGAACGACCAATCACTCAGAAGGAGAGAAGAGTGACGCTGAGT
CCAATTCATCTGACGCTGAGAGTAAAGGTGAAGACCATTCAACTGGAGATGATATGCCCC
AAAGCAATACTGTCCTAGAGGAAAGCAGTGCAGAGACGAACAGAATGCCCCATGAAGAAG
TTGCACATGGTGATGAATCTACTAATGAAGATCAGTCCAATGTGAAAAGTGACGGATCTA
ATGAAGAGGAAGCTGAGAAAAAAGAGGCAGTGGATTCTCAAAATGCTTCTGAATCTCTGT
CCGATGATGCGAAGGGTGGAACAGATGATGAGCATTCCAGTGGAACTCTTCCTGATGAAA
CAGGTAATCTACCATCAGGGCAGAATGAGAACTCACAAAGTGATGCGACTTCCACCACAT
CTGATGCTTCTAGCGAGGCTGTTCACATTGAGACTGGATCTGAGAATGAAGATGCAGCAA
AATCATCTGGGACTGCATCTGGTGATGATGACAAGGGCTCAGCCAATGAGGCATCTGATT
CAAACGAAACAAAATCTGATGAAGGCAATGTGGCAGCAGAAGTTTCTAATGACCAGGCTG
CAAACACGGAGGCAGGGAACTCCCAAGAAGCGTCTGCTGCAGAAGCTGCAAATGGCTCTT
CAGAAGAGACCAAGCCTGTGGAGAACCAGAATGATGGGAATACAGAGTCGTCTAACAATG
GTGAGCAGGTGGATATCAAGATGGAAACCAGTGCTTCCACCAATGCCGAGCAGAAGGAAT
CTCAAGTCGGCGATGGCAGCTCTGGGTCGAACGGCTCAAATGACAGTGGCGCTAAACAGA
CTGGCACGACTGAAACCCAGTGATACAACAACCAATTGGACATGAACATTGTTTATTATA
CGGATTTATCCCTGAAAATTTAGACGGGCTACTGCACATAGAATTTTCAGGTTGAGGTTA
CGATCGTTTAGCTCATAGCAAATGTATGGTTGGTGCCAATAGTGCACTCTATGTGATCCG
TGCTCAGAAAGACAATCGACTATCGAATGTATTTTCTTCTTGACTCGTGTGGCTTTGGCC
GAGACACTCAAACCCTGCATAGTGATCTATTCATGAATTCAGTATAATATACGCGGAAGT
TCATGTG