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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os06t0553800-01
CDS Infomation

cds chromosome:IRGSP-1.0:6:21048725:21049747:-1 gene:Os06g0553800 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:EARLY NODULIN LIKE PROTEIN 17 description:Cupredoxin domain containing protein. (Os06t0553800-01)
Sequence

ATGGCTCGGAGGGATCAGCTGGTCTCTTTCCTCTGCTTCTTCCTGATCGTCTCTGCCGTC
GCCGGCGGCTTGTGCGTCTCGGCCACCGTGCTCCCGATGCGGGTGGGGAAGCAGTACGTC
GTCGGCGGCCGTAGCGGGTGGAGGACGCCGCCGCCGGCTAGCGTCGACTTGTACGCCAAG
TGGGCCGCCGGCATCCGCTTCTACGTCGCCGACTCCATTGAGTTCGTGTACAAGAACGAT
TCCGTGGTGAAGGTGGACAAGTTCGGGTACTACCACTGCAACGCGACGGCGGCGGCGGCC
AACGACGGCAGCGTGCTCTTCCTCCTCGACGCCCCCGGCTTCGCCTACTTCTCCAGCGCC
GACGCCGATCACTGCAAGAAGGGCCAGCGCCTCATGATCAACGTCGACTCCGCCCCGTCG
CCATCGCCTTCCCCGAGCCCGGCGCCCCAAGAAGCCGCAACGGCGAGCGCCGCAACGTCG
TCGTCGGCGGCGACAGCGGCTCACGCATTGCTCCTGGCCGCGATGGCCATGATGGGCTTG
ATTCTTGGAGAGTGGTAG

Peptide Sequence

PEP ID

Os06t0553800-01
PEP Infomation

pep chromosome:IRGSP-1.0:6:21048725:21049747:-1 gene:Os06g0553800 transcript:Os06t0553800-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:EARLY NODULIN LIKE PROTEIN 17 description:Cupredoxin domain containing protein. (Os06t0553800-01)
Sequence

MARRDQLVSFLCFFLIVSAVAGGLCVSATVLPMRVGKQYVVGGRSGWRTPPPASVDLYAK
WAAGIRFYVADSIEFVYKNDSVVKVDKFGYYHCNATAAAANDGSVLFLLDAPGFAYFSSA
DADHCKKGQRLMINVDSAPSPSPSPSPAPQEAATASAATSSSAATAAHALLLAAMAMMGL
ILGEW

Transcript Sequence

Transcript ID

Os06t0553800-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:6:21048725:21049747:-1 gene:Os06g0553800 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:EARLY NODULIN LIKE PROTEIN 17 description:Cupredoxin domain containing protein. (Os06t0553800-01)
Sequence

TCAGTTCAATTTTGTCATAATCGGCTGCTTCTTCGCTTCAATTCTGTGTTGGTAGCAGGC
GACGCTCGGTGTCTTAGTTCATGGCTCGGAGGGATCAGCTGGTCTCTTTCCTCTGCTTCT
TCCTGATCGTCTCTGCCGTCGCCGGCGGCTTGTGCGTCTCGGCCACCGTGCTCCCGATGC
GGGTGGGGAAGCAGTACGTCGTCGGCGGCCGTAGCGGGTGGAGGACGCCGCCGCCGGCTA
GCGTCGACTTGTACGCCAAGTGGGCCGCCGGCATCCGCTTCTACGTCGCCGACTCCATTG
AGTTCGTGTACAAGAACGATTCCGTGGTGAAGGTGGACAAGTTCGGGTACTACCACTGCA
ACGCGACGGCGGCGGCGGCCAACGACGGCAGCGTGCTCTTCCTCCTCGACGCCCCCGGCT
TCGCCTACTTCTCCAGCGCCGACGCCGATCACTGCAAGAAGGGCCAGCGCCTCATGATCA
ACGTCGACTCCGCCCCGTCGCCATCGCCTTCCCCGAGCCCGGCGCCCCAAGAAGCCGCAA
CGGCGAGCGCCGCAACGTCGTCGTCGGCGGCGACAGCGGCTCACGCATTGCTCCTGGCCG
CGATGGCCATGATGGGCTTGATTCTTGGAGAGTGGTAGTAACAACAGAGTTTGCATTGAG
CTAGGCCATCAGGGTGTTAGTTAATTAGGATGGTTAATTACTTCGGTGCAGTATGGAACG
TACTGGCTGGAGCTTAATTACCGTCGCTGAACTGAATAATTTCGATGTGAATTAGACGAT
TAGTTGTTGATTTGTCGCTTTAGAATCGAAGAAGAAATTAAGATCTCTCCATTTTCATGC