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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os06t0552900-00
CDS Infomation

cds chromosome:IRGSP-1.0:6:20971660:20974252:-1 gene:Os06g0552900 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:FLOWERING TIME LIKE GENE 12 description:Similar to SP3D. (Os06t0552900-00)
Sequence

ATGGCAAATGACTCATTGACAAGGAGCCATATAGTTGGAGATGTGTTAGACCAATTTTCA
AACTCAGTGCCTCTAACTGTGATGTATGATGGGAGGCCTGTGTTTAATGGCAAGGAGTTC
CGTTCCTCGGCAGTCTCGATGAAACCTAGAGTTGAGATTGGTGGCGATGATTTTCGATTT
GCCTATACCCTAGTTATGGTGGATCCTGATGCTCCTAATCCCAGCAACCCAACCTTGAGG
GAATACCTGCACTGGATGGTGACTGATATCCCATCATCGACGGACGATAGCTTTGGGCGG
GAGATCGTAACATACGAAAGCCCAAGCCCCACCATGGGCATCCACCGCATCGTGATGGTG
TTGTATCAGCAGCTTGGGCGCGGCACGGTGTTCGCGCCGCAGGTGCGTCAGAACTTCAAC
CTGCGCAGCTTCGCGCGCCGTTTCAACCTCGGCAAGCCGGTGGCCGCCATGTACTTCAAC
TGCCAGCGCCCGACAGGCACAGGTGGGAGGAGGCCAACCTGA

Peptide Sequence

PEP ID

Os06t0552900-00
PEP Infomation

pep chromosome:IRGSP-1.0:6:20971660:20974252:-1 gene:Os06g0552900 transcript:Os06t0552900-00 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:FLOWERING TIME LIKE GENE 12 description:Similar to SP3D. (Os06t0552900-00)
Sequence

MANDSLTRSHIVGDVLDQFSNSVPLTVMYDGRPVFNGKEFRSSAVSMKPRVEIGGDDFRF
AYTLVMVDPDAPNPSNPTLREYLHWMVTDIPSSTDDSFGREIVTYESPSPTMGIHRIVMV
LYQQLGRGTVFAPQVRQNFNLRSFARRFNLGKPVAAMYFNCQRPTGTGGRRPT

Transcript Sequence

Transcript ID

Os06t0552900-00
Transcript Infomation

cdna chromosome:IRGSP-1.0:6:20971660:20974252:-1 gene:Os06g0552900 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:FLOWERING TIME LIKE GENE 12 description:Similar to SP3D. (Os06t0552900-00)
Sequence

AGCCATTGCAAGGCCTGTTAGCATTTGTAGAGCTAGCTAGCTTAGCTTCAGCTCACACCT
ACATATATCAGCTCTCACAGTCTCAAAACACATCATGGCAAATGACTCATTGACAAGGAG
CCATATAGTTGGAGATGTGTTAGACCAATTTTCAAACTCAGTGCCTCTAACTGTGATGTA
TGATGGGAGGCCTGTGTTTAATGGCAAGGAGTTCCGTTCCTCGGCAGTCTCGATGAAACC
TAGAGTTGAGATTGGTGGCGATGATTTTCGATTTGCCTATACCCTAGTTATGGTGGATCC
TGATGCTCCTAATCCCAGCAACCCAACCTTGAGGGAATACCTGCACTGGATGGTGACTGA
TATCCCATCATCGACGGACGATAGCTTTGGGCGGGAGATCGTAACATACGAAAGCCCAAG
CCCCACCATGGGCATCCACCGCATCGTGATGGTGTTGTATCAGCAGCTTGGGCGCGGCAC
GGTGTTCGCGCCGCAGGTGCGTCAGAACTTCAACCTGCGCAGCTTCGCGCGCCGTTTCAA
CCTCGGCAAGCCGGTGGCCGCCATGTACTTCAACTGCCAGCGCCCGACAGGCACAGGTGG
GAGGAGGCCAACCTGATCTGATCAATATCGATCGATCTTCGATCTTCTAGCTCTTGTACA
TGTTGAGTGTTGACCAATATAATGGCCACTCATGCATATATGCAGTGTGTCTAGCCAGCT
GCATGCAACTTTGTCTACGTGCTTATATAATTAAACAAATGCATATATAGCCGGCCGTAT
CATAAAGTTCCTAGCTATAAAAGCTATAGAATAAATGTCGCCCCACTTGGTCAGTTGGTG
TACATGACGGCTCCTAAGTGTGCTATCATGAATATGCTA