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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os06t0550000-00
CDS Infomation

cds chromosome:IRGSP-1.0:6:20851191:20853613:-1 gene:Os06g0550000 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to 60S ribosomal protein L11. (Os06t0550000-00)
Sequence

GGCTTACCCTCTGCGGCGCGGTGTGGCTGCCCACACGCGTGTGTGCTGTCGCAGGCGTCG
GAGAAGAAGCAGTCCAACCCAATGAGGGAGATCAAGGTGCAGAAGCTGGTGCTCAACATC
TCCGTCGGGGAGAGCGGAGATCGCCTCACCCGTGCCTCCAAGGTCTTGGAGCAACTGAGT
GGGCAGTCACCAGTGTTCTCTAAGGCTAGATACACCGTTCGCTCATTTGGCATCAGGCGT
AATGAGAAGATTGCGTGCTATGTAACTGTTAGGGGTGAGAAGGCAATGCAGCTTCTTGAG
AGTGGACTGAAGGTGAAGGAATATGAACTTCTGAGAAGAAACTTCAGTGAAACTGGGTGT
TTTGGTTTTGGAATCCAGGAGCACATTGATCTTGGCATCAAGTATGATCCTTCAACAGGT
ATTTATGGCATGGACTTCTATGTTGTCCTTGAGCGTGCTGGATACCGTGTTGCTCGCCGT
CGCAGGTGCAAGTCCCGTGTTGGCATTCAGCACCGGGTGACCAAGGAGGATGCCATGAAG
TGGTTCCAGGTCAAGTACGAAGGTGTTATCCTCAACAAGGCCCAGGCTAATACATCTTAA

Peptide Sequence

PEP ID

Os06t0550000-00
PEP Infomation

pep chromosome:IRGSP-1.0:6:20851191:20853613:-1 gene:Os06g0550000 transcript:Os06t0550000-00 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to 60S ribosomal protein L11. (Os06t0550000-00)
Sequence

GLPSAARCGCPHACVLSQASEKKQSNPMREIKVQKLVLNISVGESGDRLTRASKVLEQLS
GQSPVFSKARYTVRSFGIRRNEKIACYVTVRGEKAMQLLESGLKVKEYELLRRNFSETGC
FGFGIQEHIDLGIKYDPSTGIYGMDFYVVLERAGYRVARRRRCKSRVGIQHRVTKEDAMK
WFQVKYEGVILNKAQANTS

Transcript Sequence

Transcript ID

Os06t0550000-00
Transcript Infomation

cdna chromosome:IRGSP-1.0:6:20851191:20853613:-1 gene:Os06g0550000 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to 60S ribosomal protein L11. (Os06t0550000-00)
Sequence

GGCTTACCCTCTGCGGCGCGGTGTGGCTGCCCACACGCGTGTGTGCTGTCGCAGGCGTCG
GAGAAGAAGCAGTCCAACCCAATGAGGGAGATCAAGGTGCAGAAGCTGGTGCTCAACATC
TCCGTCGGGGAGAGCGGAGATCGCCTCACCCGTGCCTCCAAGGTCTTGGAGCAACTGAGT
GGGCAGTCACCAGTGTTCTCTAAGGCTAGATACACCGTTCGCTCATTTGGCATCAGGCGT
AATGAGAAGATTGCGTGCTATGTAACTGTTAGGGGTGAGAAGGCAATGCAGCTTCTTGAG
AGTGGACTGAAGGTGAAGGAATATGAACTTCTGAGAAGAAACTTCAGTGAAACTGGGTGT
TTTGGTTTTGGAATCCAGGAGCACATTGATCTTGGCATCAAGTATGATCCTTCAACAGGT
ATTTATGGCATGGACTTCTATGTTGTCCTTGAGCGTGCTGGATACCGTGTTGCTCGCCGT
CGCAGGTGCAAGTCCCGTGTTGGCATTCAGCACCGGGTGACCAAGGAGGATGCCATGAAG
TGGTTCCAGGTCAAGTACGAAGGTGTTATCCTCAACAAGGCCCAGGCTAATACATCTTAA
GACCTGATTTGATAGGTTTTAGGTCCAGTCACTGCTTGTTATGAGCGCAGACAAGTTTTT
ATTTCACCTAATGCAATGCCGGAGTATATTATTTTGCCAAGTCGTTTTG