Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os06t0549633-00
CDS Infomation	cds chromosome:IRGSP-1.0:6:20812459:20814107:-1 gene:Os06g0549633 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to reticuline oxidase. (Os06t0549633-00)
Sequence	ATGAGCAGCTTCAAAACCCTCTTGTTGTTCATCATCTTCTGCATCTTCTCTTCTTGTTAC ATCCCCAGTCCTGCCATAGCTTCTGATCATGATCCTTCTTCCAAAGGTTTCATCCATTGC CTCACCAAGAAATCCATTCCTCCATGGCTCATACACAAAAGGAGCTCCTCTTCCTATACA CCCATCCTCAAGTCCTCCATCAGAAACCCTAAATTCTTGAACACCACCGCGTCGACGACG CCGCTGTGCATCGTCATGGCGAAGAAGACCTCCCACATCCAGGCCGCCGTCGTCTGCGGC CGCCGGCATCGTGTCCGCGTCCGCGCGCGCAGCGGCGGGCACGACTACGAGGGGCTCTCG TACCGCGCCGAGGGTCGCCTCGAGCGGTTCGCCGTCGTCGACCTGTCGGGGATGCGGTCG GTGCGCGTCGACGCAGCGCGCGGCACGGCGTGGGTGCAGTCCGGCGCGACGCTCGGCGAG CTGTACCACGCCATCTGGAGCAGCGCGCCGCGGCTCGGCTTCGCCGCGGGGGTCTGCCCG ACCGTCGGCGTCGGCGGCCACTTCAGCGGCGGCGGCTTCGGCATGCTGCAGCGCAAGTAC GGCCTCGCCGTCGACCACGTCGTGAACGCCACGCTGGTCGACGCGAGGGGCGACCTCCTC GGCAGGGACGCCATGGGCGAGGACCTCTTCTGGGCGATCCGCGGCGGCGGCGGCGGGAGC TTCGGCATCGTGGTCTCCTGGCACATCAAGCTCGTCCCCGTCCCGCCCACCGTCACGGTG TTCGACGTCGTCAGGACGCCGGAGCGCGGCGCCATCGACGTCCTCACGAAATGGCAGGAG ATCGCGCCCCGATTGCCCGACGACATCATGGTCAGGGTCATCGCCGAGCCACGCCGCGTC ACCTTCGAGGCCATGTACCTCGGCACCTGCGACGAGCTCCTGCCATTGATGCACCACCGA TTCCCCGACCTCGCCATGACAAGGGCGGACTGCAACGAGATGACATGGATCGAGTCCATC CCCTACATCCACCTCGGCAGCAACGCGACGGTGGCCGACATCCTGAACCGGAGCTCCATC TCCAGGGTGAACACCAAAAACCGATCCGACTACGTCAGGCACCCCATCCCAAAGTCCATT TGGAAGAAGATCTTCGCCAAGCTACAACAGCTAACCAACTTCGGTGAGGTTCAGCTGTTC ATAGACCCCTACGGTGCCAAGATCAGCCGCATCCATGAATCCGCGACACCGTTCCCGCAC CGGGAAGGCGTCCTGTACAACATCCAGTACATCACGTACTGGAACGGTGATGCAAATGGC ACACTGGCTCTGAAGTGGAGCAGGGACCTGTACAAGTTCATGGAGCCCTACGTGAGCAAG AACCCCAGGGAGGCGTATGCCAACTACAGGGACCTTGATCTTGGGAGGAACAAGGTGGTG AACGGCATCAGCAGCTATCACCATGGCAAGGTTTGGGGGGAGAAGTATTTCAGGGCCAAT TTCGAAAGGCTTGCCAAAGTGAAGGCCACGGTGGATCCTGATGATTACTTCAGGAATGAG CAGAGCATTCCTCCCTTGTTCGAGTGA

Peptide Sequence

PEP ID	Os06t0549633-00
PEP Infomation	pep chromosome:IRGSP-1.0:6:20812459:20814107:-1 gene:Os06g0549633 transcript:Os06t0549633-00 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to reticuline oxidase. (Os06t0549633-00)
Sequence	MSSFKTLLLFIIFCIFSSCYIPSPAIASDHDPSSKGFIHCLTKKSIPPWLIHKRSSSSYT PILKSSIRNPKFLNTTASTTPLCIVMAKKTSHIQAAVVCGRRHRVRVRARSGGHDYEGLS YRAEGRLERFAVVDLSGMRSVRVDAARGTAWVQSGATLGELYHAIWSSAPRLGFAAGVCP TVGVGGHFSGGGFGMLQRKYGLAVDHVVNATLVDARGDLLGRDAMGEDLFWAIRGGGGGS FGIVVSWHIKLVPVPPTVTVFDVVRTPERGAIDVLTKWQEIAPRLPDDIMVRVIAEPRRV TFEAMYLGTCDELLPLMHHRFPDLAMTRADCNEMTWIESIPYIHLGSNATVADILNRSSI SRVNTKNRSDYVRHPIPKSIWKKIFAKLQQLTNFGEVQLFIDPYGAKISRIHESATPFPH REGVLYNIQYITYWNGDANGTLALKWSRDLYKFMEPYVSKNPREAYANYRDLDLGRNKVV NGISSYHHGKVWGEKYFRANFERLAKVKATVDPDDYFRNEQSIPPLFE

Transcript Sequence

Transcript ID	Os06t0549633-00
Transcript Infomation	cdna chromosome:IRGSP-1.0:6:20812459:20814107:-1 gene:Os06g0549633 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to reticuline oxidase. (Os06t0549633-00)
Sequence	ATGAGCAGCTTCAAAACCCTCTTGTTGTTCATCATCTTCTGCATCTTCTCTTCTTGTTAC ATCCCCAGTCCTGCCATAGCTTCTGATCATGATCCTTCTTCCAAAGGTTTCATCCATTGC CTCACCAAGAAATCCATTCCTCCATGGCTCATACACAAAAGGAGCTCCTCTTCCTATACA CCCATCCTCAAGTCCTCCATCAGAAACCCTAAATTCTTGAACACCACCGCGTCGACGACG CCGCTGTGCATCGTCATGGCGAAGAAGACCTCCCACATCCAGGCCGCCGTCGTCTGCGGC CGCCGGCATCGTGTCCGCGTCCGCGCGCGCAGCGGCGGGCACGACTACGAGGGGCTCTCG TACCGCGCCGAGGGTCGCCTCGAGCGGTTCGCCGTCGTCGACCTGTCGGGGATGCGGTCG GTGCGCGTCGACGCAGCGCGCGGCACGGCGTGGGTGCAGTCCGGCGCGACGCTCGGCGAG CTGTACCACGCCATCTGGAGCAGCGCGCCGCGGCTCGGCTTCGCCGCGGGGGTCTGCCCG ACCGTCGGCGTCGGCGGCCACTTCAGCGGCGGCGGCTTCGGCATGCTGCAGCGCAAGTAC GGCCTCGCCGTCGACCACGTCGTGAACGCCACGCTGGTCGACGCGAGGGGCGACCTCCTC GGCAGGGACGCCATGGGCGAGGACCTCTTCTGGGCGATCCGCGGCGGCGGCGGCGGGAGC TTCGGCATCGTGGTCTCCTGGCACATCAAGCTCGTCCCCGTCCCGCCCACCGTCACGGTG TTCGACGTCGTCAGGACGCCGGAGCGCGGCGCCATCGACGTCCTCACGAAATGGCAGGAG ATCGCGCCCCGATTGCCCGACGACATCATGGTCAGGGTCATCGCCGAGCCACGCCGCGTC ACCTTCGAGGCCATGTACCTCGGCACCTGCGACGAGCTCCTGCCATTGATGCACCACCGA TTCCCCGACCTCGCCATGACAAGGGCGGACTGCAACGAGATGACATGGATCGAGTCCATC CCCTACATCCACCTCGGCAGCAACGCGACGGTGGCCGACATCCTGAACCGGAGCTCCATC TCCAGGGTGAACACCAAAAACCGATCCGACTACGTCAGGCACCCCATCCCAAAGTCCATT TGGAAGAAGATCTTCGCCAAGCTACAACAGCTAACCAACTTCGGTGAGGTTCAGCTGTTC ATAGACCCCTACGGTGCCAAGATCAGCCGCATCCATGAATCCGCGACACCGTTCCCGCAC CGGGAAGGCGTCCTGTACAACATCCAGTACATCACGTACTGGAACGGTGATGCAAATGGC ACACTGGCTCTGAAGTGGAGCAGGGACCTGTACAAGTTCATGGAGCCCTACGTGAGCAAG AACCCCAGGGAGGCGTATGCCAACTACAGGGACCTTGATCTTGGGAGGAACAAGGTGGTG AACGGCATCAGCAGCTATCACCATGGCAAGGTTTGGGGGGAGAAGTATTTCAGGGCCAAT TTCGAAAGGCTTGCCAAAGTGAAGGCCACGGTGGATCCTGATGATTACTTCAGGAATGAG CAGAGCATTCCTCCCTTGTTCGAGTGATGATCATGTGGCATTTCAGGCATATGTAAAAGT AATAATTTCTTTCGGATACCTACTGGTAG