Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
(lang=JA only) Sequences Other Tools

Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os06t0549600-01
CDS Infomation

cds chromosome:IRGSP-1.0:6:20808194:20810005:-1 gene:Os06g0549600 gene_biotype:protein_coding transcript_biotype:protein_coding description:FAD-linked oxidase, FAD-binding, subdomain 2 domain containing protein. (Os06t0549600-01)
Sequence

ATGGCCGCGTCGACAAGTCTGGCGCTCGTGCTCGCCGTCTGCTGCTGCTGCTGCTACGCG
GCGTCCGTCGCCCCGCTGTCCTCCGCCGACTCCTCCGGCGAATTCCTGCAGTGCCTCGCC
GCGGGCGTGCCTAGCCAGCTCGTCGTCACGCGGGGCTCGTCGTCGTTCGCGTCGGTGCTG
GCGTCGTCCGTCAGGAACCCGAGGTTCCTGGCGCCCGGCACCGTGCGGCCGCTCTGCGTC
GTGAAGCCCACCAACGCGTCGCACGTCCAGGCCGCCGTGCTGTGCGGCCGCCGCCACGGG
GTGCGCCTCCGCGTGCGCAGCGGCGGGCACGACTACGAGGGCCTCTCGTACCGGTCCGTG
CGCCAGGAGGTGTTCGCCGTGGTCGACCTCGCCGGCCTCCGCTCCGTGCGCGTCAACCGC
CGCGCGGCCACCGCGTGGGTGGACTCCGGCGCGACGGTCGGGGAGATGTACTACGCCGTC
GCCAAGGCGGACGCCGGGCTCGCGTTCCCCGCCGGCCTGTGCCCGACCATCGGCGTGGGC
GGGCATTTCAGCGGCGGAGGGATCGGCATGATGATGCGCAAGTATGGTCTCTCCGTGGAC
AACGTCCTCGACGCCATGGTCGTAGACGCCAACGGGAGGCTCCTGGACAAGAAGGCCATG
GGGAGGGACTACTTCTGGGCCCTCCGTGGCGGCGGCGGCGAGAGCTTCGGCATCGTGCTG
TCGTGGAAGGTGAGGCTCGTGGCTGTCCCACGGACGGTGACGGTGTTCAACATCCAGAAG
ACGCTGGCCCAGGGCGCCGTGGACGCCGTCACCAAATGGCAAACGCTCGCGCCGGCGGCG
CTCCCCGACGAGCTCACCATTCGGGTGGTCGTGCAGAACAAGCAAGCCCTGTTCCAGTCG
CTGTACCTCGGCACGTGCGACCAGCTCCTGCCGGTGATGGGCTCGCGCTTCCCGGAGCTC
GGCATGACGCGTGCCGACTGCCGGGAGATGAGCTGGCTGCAGTCCATGGTGTACATCAAC
GGCGGCACCAGCAGCACGCCGGTGGAGGTGCTCCTGAACAGGACGACCAGCCTGAGCGTC
TACACCAAGAACAAGTCCGACTACGTCAAGCAGGCCATCCCCAGCGCCTCCTGGGAGAAG
ATCTTCCCGTGGTTCGACGGCGCCGCCGGTGCGGGGCTCATCATCCTGGAGCCTCACGGC
GGGAGAGTCGGCAGCATCGCCGACGGCAACACGCCGTACCCGCACCGGTCCGGCGTCCTC
TACAACATCCAGTACGTCGCGTTCTGGCCGACGACGACGGCGACGCCCGCGGTGCCGGAC
TGGATCAAGAACGTGCACGCGTTCATGGAGCCGTTCGTCACCAGCAACCCGAGGGATGCG
TACGTGAACTACCGCGACCTCGACATCGGCGAGAACGCGGTGGCCGGCGGCGTGACGAGC
TACGAGAACGGCAGGGTGTGGGGGGAGAAGTACTTCGGCGCGGCCAACTTCAGGAGGCTG
GCGCTGACCAAGGGGAAGGTGGACGCCAGCGACTACTTCCGGAACGAGCAGAGCATCCCG
CCGCTTGTCTCCACCAAGTAG

Peptide Sequence

PEP ID

Os06t0549600-01
PEP Infomation

pep chromosome:IRGSP-1.0:6:20808194:20810005:-1 gene:Os06g0549600 transcript:Os06t0549600-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:FAD-linked oxidase, FAD-binding, subdomain 2 domain containing protein. (Os06t0549600-01)
Sequence

MAASTSLALVLAVCCCCCYAASVAPLSSADSSGEFLQCLAAGVPSQLVVTRGSSSFASVL
ASSVRNPRFLAPGTVRPLCVVKPTNASHVQAAVLCGRRHGVRLRVRSGGHDYEGLSYRSV
RQEVFAVVDLAGLRSVRVNRRAATAWVDSGATVGEMYYAVAKADAGLAFPAGLCPTIGVG
GHFSGGGIGMMMRKYGLSVDNVLDAMVVDANGRLLDKKAMGRDYFWALRGGGGESFGIVL
SWKVRLVAVPRTVTVFNIQKTLAQGAVDAVTKWQTLAPAALPDELTIRVVVQNKQALFQS
LYLGTCDQLLPVMGSRFPELGMTRADCREMSWLQSMVYINGGTSSTPVEVLLNRTTSLSV
YTKNKSDYVKQAIPSASWEKIFPWFDGAAGAGLIILEPHGGRVGSIADGNTPYPHRSGVL
YNIQYVAFWPTTTATPAVPDWIKNVHAFMEPFVTSNPRDAYVNYRDLDIGENAVAGGVTS
YENGRVWGEKYFGAANFRRLALTKGKVDASDYFRNEQSIPPLVSTK

Transcript Sequence

Transcript ID

Os06t0549600-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:6:20808194:20810005:-1 gene:Os06g0549600 gene_biotype:protein_coding transcript_biotype:protein_coding description:FAD-linked oxidase, FAD-binding, subdomain 2 domain containing protein. (Os06t0549600-01)
Sequence

GTACGTGTTCGTGTCATCACTGAACGTTAGAGTGGACACAACATCTCACAATGGCCGCGT
CGACAAGTCTGGCGCTCGTGCTCGCCGTCTGCTGCTGCTGCTGCTACGCGGCGTCCGTCG
CCCCGCTGTCCTCCGCCGACTCCTCCGGCGAATTCCTGCAGTGCCTCGCCGCGGGCGTGC
CTAGCCAGCTCGTCGTCACGCGGGGCTCGTCGTCGTTCGCGTCGGTGCTGGCGTCGTCCG
TCAGGAACCCGAGGTTCCTGGCGCCCGGCACCGTGCGGCCGCTCTGCGTCGTGAAGCCCA
CCAACGCGTCGCACGTCCAGGCCGCCGTGCTGTGCGGCCGCCGCCACGGGGTGCGCCTCC
GCGTGCGCAGCGGCGGGCACGACTACGAGGGCCTCTCGTACCGGTCCGTGCGCCAGGAGG
TGTTCGCCGTGGTCGACCTCGCCGGCCTCCGCTCCGTGCGCGTCAACCGCCGCGCGGCCA
CCGCGTGGGTGGACTCCGGCGCGACGGTCGGGGAGATGTACTACGCCGTCGCCAAGGCGG
ACGCCGGGCTCGCGTTCCCCGCCGGCCTGTGCCCGACCATCGGCGTGGGCGGGCATTTCA
GCGGCGGAGGGATCGGCATGATGATGCGCAAGTATGGTCTCTCCGTGGACAACGTCCTCG
ACGCCATGGTCGTAGACGCCAACGGGAGGCTCCTGGACAAGAAGGCCATGGGGAGGGACT
ACTTCTGGGCCCTCCGTGGCGGCGGCGGCGAGAGCTTCGGCATCGTGCTGTCGTGGAAGG
TGAGGCTCGTGGCTGTCCCACGGACGGTGACGGTGTTCAACATCCAGAAGACGCTGGCCC
AGGGCGCCGTGGACGCCGTCACCAAATGGCAAACGCTCGCGCCGGCGGCGCTCCCCGACG
AGCTCACCATTCGGGTGGTCGTGCAGAACAAGCAAGCCCTGTTCCAGTCGCTGTACCTCG
GCACGTGCGACCAGCTCCTGCCGGTGATGGGCTCGCGCTTCCCGGAGCTCGGCATGACGC
GTGCCGACTGCCGGGAGATGAGCTGGCTGCAGTCCATGGTGTACATCAACGGCGGCACCA
GCAGCACGCCGGTGGAGGTGCTCCTGAACAGGACGACCAGCCTGAGCGTCTACACCAAGA
ACAAGTCCGACTACGTCAAGCAGGCCATCCCCAGCGCCTCCTGGGAGAAGATCTTCCCGT
GGTTCGACGGCGCCGCCGGTGCGGGGCTCATCATCCTGGAGCCTCACGGCGGGAGAGTCG
GCAGCATCGCCGACGGCAACACGCCGTACCCGCACCGGTCCGGCGTCCTCTACAACATCC
AGTACGTCGCGTTCTGGCCGACGACGACGGCGACGCCCGCGGTGCCGGACTGGATCAAGA
ACGTGCACGCGTTCATGGAGCCGTTCGTCACCAGCAACCCGAGGGATGCGTACGTGAACT
ACCGCGACCTCGACATCGGCGAGAACGCGGTGGCCGGCGGCGTGACGAGCTACGAGAACG
GCAGGGTGTGGGGGGAGAAGTACTTCGGCGCGGCCAACTTCAGGAGGCTGGCGCTGACCA
AGGGGAAGGTGGACGCCAGCGACTACTTCCGGAACGAGCAGAGCATCCCGCCGCTTGTCT
CCACCAAGTAGTGATCGATTAGATAGCAATGCAGCTGATGTTTCTTGTGATAGTTGGTGC
ATATGCGTGCGTGCGTGCGTGTCTTGTGTGTGACAGATTGATAGCTACTGGTATACAGTA
TTTGTTTCGTGTTGGATCATGATTTGTGAACGATTGTGTAAATTTTTAATAATAATATAA
GATTTGAATTGT