Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os06t0549300-00
CDS Infomation	cds chromosome:IRGSP-1.0:6:20784441:20786120:-1 gene:Os06g0549300 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to reticuline oxidase. (Os06t0549300-00)
Sequence	AGAAACCTATCACTAGTGCTAACCATTAGCTTCTTGTCGTGTCACTACCTCTCCGTCACT TCGCTTGCCTCCTCCGATGGCTTCGTGCGGTGTCTCCTGCAGAAGATCCCCGGAGAGCTG GTGCTCACGCCGAGCTCGAGCAGCTTCGCCGACGTGCTCGTCTCCTCCATCCGGAACCCC ATGTTTTTCAACAACGCCACGGCGAGGCCGCTCTGCATCGTCACGCCGGCCGACGCGTCG CACGTCCAGGCCGCCGTGCTCTGCGGCCGCGCCGAGGGGGTGCGCCTCCGCGCGCGCAGC GGCGGGCACGACTACGAGGGCCTCTCGTACCGGTCCGCGCGCCGCGGCGAGGTGTTCGCG GTGGTCGACCTCGGCGCCAGGCTCCGCGCCGTGAGCGTCAGCGGCGGGGGCGACGCCACG GCGTGGGTGGAGTCCGGCGCGTCGCTCGGGGAGCTGTACTACACCGTCGCGAAGAGCAAC CCGGGGCTGGCGTTCCCGGCCGGCGTGTGCCCGACCATCGGCGTCGGTGGCCACCTCAGC GGCGGCGGGATCAGCATGATGTCACGCAAGTACGGGCTCGCCGCCGACAACATCCTCGAC GCCAAGCTGGTGAACGCCAACGGCGAGCTCGTCGACAGGGCCGCCATGGGGGAGGACCTC TTCTGGGCGATCCGCGGCGGCGGCGGAGAGAGCTTCGGCATCGTGGTGTCCTGGAAGGTC CGCCTCGTGCAGGTTCCGACGACGGTGACGGTGTTCGTCGTCGGGAGGAACGTCGACCAG GGCGCCGCCGACGTCGTCGCCAGATGGCAAGACGTCGCGCCGAGCCTCCCTCCCGAGCTC ACCATACGGGTGATCGTGCGAGGGCAGCGCGCCACGTTCCAGTCGCTGTACCTCGGCTCG TGCGCCGACCTGGTGCCGACGATGAGCAGCATGTTCCCGGAGCTCGGGATGACGAGCGCC GACTGCCGGGAGATGAGCTGGCTGCAGTCGGCGGCGCTCATCCAGTTCTGGAACCCAAGC ACGCCGGTGGAGGCGCTCCTCAACCGGAGGACCAGCCTGAGCACCTTCACCAAGGCCAAG TCCGACTACGTCCGGCGAGCCATCCCGTCGGACGTGTGGAAGAACATCCTCCCGTGGTTC ACCATGAACGGCTCCGGCCAGATGCTCCTCGAGCCGATGGGCGGGTTCGTCGGTGGCGTC CCCGCCGCGGCGACGCCGTACCCGCACCGGAGCGGCGTCCTGTACAACATCCAGTACATC GCGTACTGGTCCGGCGACGGAACGGCGGCGAACAGGTGGATCAGTGGCCTGTACGCGTTC ATGGAGCCGTACGTCAGCAGCGACCCGAGGGAGGCGTACGTGAACTTCCGGGACCTGGAC ATCGGCGAGAACGCGGTGGCGCCGAACGACGTGAGCACGTTCGAGAGCGGCAAGGTGTGG GGGGAGAAGTACTTCGCCGGCAACTTCGAGAGGCTCGCCGCGGTGAAGGCGGCGATGGAT CCGACCGACTACTTCAGGAACGAGCAGAGCATCCCGCCATTTGTTGGTCCAAAGCAAGTG AAAAAAGCTTAA

Peptide Sequence

PEP ID	Os06t0549300-00
PEP Infomation	pep chromosome:IRGSP-1.0:6:20784441:20786120:-1 gene:Os06g0549300 transcript:Os06t0549300-00 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to reticuline oxidase. (Os06t0549300-00)
Sequence	RNLSLVLTISFLSCHYLSVTSLASSDGFVRCLLQKIPGELVLTPSSSSFADVLVSSIRNP MFFNNATARPLCIVTPADASHVQAAVLCGRAEGVRLRARSGGHDYEGLSYRSARRGEVFA VVDLGARLRAVSVSGGGDATAWVESGASLGELYYTVAKSNPGLAFPAGVCPTIGVGGHLS GGGISMMSRKYGLAADNILDAKLVNANGELVDRAAMGEDLFWAIRGGGGESFGIVVSWKV RLVQVPTTVTVFVVGRNVDQGAADVVARWQDVAPSLPPELTIRVIVRGQRATFQSLYLGS CADLVPTMSSMFPELGMTSADCREMSWLQSAALIQFWNPSTPVEALLNRRTSLSTFTKAK SDYVRRAIPSDVWKNILPWFTMNGSGQMLLEPMGGFVGGVPAAATPYPHRSGVLYNIQYI AYWSGDGTAANRWISGLYAFMEPYVSSDPREAYVNFRDLDIGENAVAPNDVSTFESGKVW GEKYFAGNFERLAAVKAAMDPTDYFRNEQSIPPFVGPKQVKKA

Transcript Sequence

Transcript ID	Os06t0549300-00
Transcript Infomation	cdna chromosome:IRGSP-1.0:6:20784441:20786120:-1 gene:Os06g0549300 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to reticuline oxidase. (Os06t0549300-00)
Sequence	AGAAACCTATCACTAGTGCTAACCATTAGCTTCTTGTCGTGTCACTACCTCTCCGTCACT TCGCTTGCCTCCTCCGATGGCTTCGTGCGGTGTCTCCTGCAGAAGATCCCCGGAGAGCTG GTGCTCACGCCGAGCTCGAGCAGCTTCGCCGACGTGCTCGTCTCCTCCATCCGGAACCCC ATGTTTTTCAACAACGCCACGGCGAGGCCGCTCTGCATCGTCACGCCGGCCGACGCGTCG CACGTCCAGGCCGCCGTGCTCTGCGGCCGCGCCGAGGGGGTGCGCCTCCGCGCGCGCAGC GGCGGGCACGACTACGAGGGCCTCTCGTACCGGTCCGCGCGCCGCGGCGAGGTGTTCGCG GTGGTCGACCTCGGCGCCAGGCTCCGCGCCGTGAGCGTCAGCGGCGGGGGCGACGCCACG GCGTGGGTGGAGTCCGGCGCGTCGCTCGGGGAGCTGTACTACACCGTCGCGAAGAGCAAC CCGGGGCTGGCGTTCCCGGCCGGCGTGTGCCCGACCATCGGCGTCGGTGGCCACCTCAGC GGCGGCGGGATCAGCATGATGTCACGCAAGTACGGGCTCGCCGCCGACAACATCCTCGAC GCCAAGCTGGTGAACGCCAACGGCGAGCTCGTCGACAGGGCCGCCATGGGGGAGGACCTC TTCTGGGCGATCCGCGGCGGCGGCGGAGAGAGCTTCGGCATCGTGGTGTCCTGGAAGGTC CGCCTCGTGCAGGTTCCGACGACGGTGACGGTGTTCGTCGTCGGGAGGAACGTCGACCAG GGCGCCGCCGACGTCGTCGCCAGATGGCAAGACGTCGCGCCGAGCCTCCCTCCCGAGCTC ACCATACGGGTGATCGTGCGAGGGCAGCGCGCCACGTTCCAGTCGCTGTACCTCGGCTCG TGCGCCGACCTGGTGCCGACGATGAGCAGCATGTTCCCGGAGCTCGGGATGACGAGCGCC GACTGCCGGGAGATGAGCTGGCTGCAGTCGGCGGCGCTCATCCAGTTCTGGAACCCAAGC ACGCCGGTGGAGGCGCTCCTCAACCGGAGGACCAGCCTGAGCACCTTCACCAAGGCCAAG TCCGACTACGTCCGGCGAGCCATCCCGTCGGACGTGTGGAAGAACATCCTCCCGTGGTTC ACCATGAACGGCTCCGGCCAGATGCTCCTCGAGCCGATGGGCGGGTTCGTCGGTGGCGTC CCCGCCGCGGCGACGCCGTACCCGCACCGGAGCGGCGTCCTGTACAACATCCAGTACATC GCGTACTGGTCCGGCGACGGAACGGCGGCGAACAGGTGGATCAGTGGCCTGTACGCGTTC ATGGAGCCGTACGTCAGCAGCGACCCGAGGGAGGCGTACGTGAACTTCCGGGACCTGGAC ATCGGCGAGAACGCGGTGGCGCCGAACGACGTGAGCACGTTCGAGAGCGGCAAGGTGTGG GGGGAGAAGTACTTCGCCGGCAACTTCGAGAGGCTCGCCGCGGTGAAGGCGGCGATGGAT CCGACCGACTACTTCAGGAACGAGCAGAGCATCCCGCCATTTGTTGGTCCAAAGCAAGTG AAAAAAGCTTAATTTGGGCTTAATTTGACGCAAGGTTGGTTGGTTGCGTGTACCGCCTTT GTGTTCGGTTCTTGGTGAACTCTTATATTATTACGTGGACATGTTCTGTTGACTGTTGAC