Gene sequences

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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os06t0548800-01
CDS Infomation	cds chromosome:IRGSP-1.0:6:20767656:20769684:-1 gene:Os06g0548800 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Nectarin 5 (Fragment). (Os06t0548800-01)
Sequence	ATGGCGAGGACGTCGATGACGACGACATCCAGGGCCCTCGCGCTGGTGCTCCTCTCGTCT TGCTGCCTCCTCGTCGCCGTCGACGCGGCCTACGCCAAGAAGCCGAATCTGTCCAAGAAT GACTTCCTCTCCTGCCTAGCCGCCGGCATCCCCGCCCGGCAGCTGTACGCCAAGGGCTCG CCGTCGTACGGCTCCGTGCTGACGTCCACCATCCGGAACCTCAGGTACTTGTCGTCCAAG ACGTGCAACCCGCTGTACATCGTCACACCGACCGACGTGAAGCACATCCAGGTGGCCGTC TCCTGCGGCCGCCGCCACAACGTCCGCATCCGCGTGCGCAGCGGCGGCCACGACTACGAG GGCCTCTCGTACCGGTCGGAGATCCCCGAGCCGTTCGCCATCGTCGACCTCGTCAACATG CGGAACGTGACCGTCGACGGCAAGGCGCGCACGGCGTGGGTGGAGTCCGGCGCGCAGATC GGCGAGCTCTACTACGGCATCTCCAAGGCGAGCCCCACGCTGGCGTTCCCGGCGGGCGTG TGCCCGACCATCGGCGTCGGGGGCCACTTCAGCGGCGGCGGGTTCGGCATGCTGCTGCGC AAGTTCGGCCTCGCGTCCGACAACGTGCTCGACGTGAAGGTGGTGGACGCGAACGGCAAG GTGCAGGACCGGAAGTCGATGGGGGAGGACTACTTATGGGCCGTCCGCGGCGGCGGCGGC TCGAGCTTCGGGATCGTGGTGTCGTGGAAGCTGAGGCTGTTGCCGGTGCCGGCGACGGTG ACGGTGATCCAGATGCCCAAGATGGTGAACGAGGGCGCCGTCGACCTCCTCACCAAGTGG CAGTCCCTCGCGCCGACGTTCCCGGAAGACCTGATGATCCGCGTGATGGCGCAGGCGCAG AAGGCCGTGTTCGAGGGCCTCTACCTCGGCACCTGCGACGCGCTCCTCCCGCTGGTGACC AGCCGCTTCCCGGAGCTGGGCGTCAACCGCTCCCACTGCAACGAGATGTCATGGGTGCAA TCCATCGCGTTCATCCACCTGGGCAAGAACGCCACCGTCAAGGACATCCTCAACCGGACC TCCTCCATCCGAGCCTTCGGCAAGTACAAGTCGGACTACGTGACGCAGCCACTGTCCAAG GCGACATGGGACACCATCTACAAGGACTGGTTCTCCAAGCCGGGCTCCGGCATCATGATC ATGGACCCGTACGGCGCCACCATCAGCAAACCCGGCGAGGCGGACACGCCGTTCCCGCAC CGGAAGGGGATGCTGTACAACATCCAGTACATCACCTTCTGGTTCGGCGAGGGCGCGCCG GCGGAGGCGCCGATCAAGTGGATCAGGGACTTCTACGCGTTCATGGAGCCGTACGTCACC AAGAACCCGAGGCAGGCGTACGTCAACTACAGGGACCTCGACCTCGGCGTCAACGCCGTC GAGGCCGGCGCCAACGTCTCCTGCTACCAGGTCGGCAAGGTGTGGGGCGAGAAGTACTTC AAGGGCAACTTCGAGAGGCTCGCCAGGACGAAGGCCAAGGTGGATCCCACCGACTTCTTC AGGAACGAGCAGAGCATTCCTCCATTGCTCGCGTGA

Peptide Sequence

PEP ID	Os06t0548800-01
PEP Infomation	pep chromosome:IRGSP-1.0:6:20767656:20769684:-1 gene:Os06g0548800 transcript:Os06t0548800-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Nectarin 5 (Fragment). (Os06t0548800-01)
Sequence	MARTSMTTTSRALALVLLSSCCLLVAVDAAYAKKPNLSKNDFLSCLAAGIPARQLYAKGS PSYGSVLTSTIRNLRYLSSKTCNPLYIVTPTDVKHIQVAVSCGRRHNVRIRVRSGGHDYE GLSYRSEIPEPFAIVDLVNMRNVTVDGKARTAWVESGAQIGELYYGISKASPTLAFPAGV CPTIGVGGHFSGGGFGMLLRKFGLASDNVLDVKVVDANGKVQDRKSMGEDYLWAVRGGGG SSFGIVVSWKLRLLPVPATVTVIQMPKMVNEGAVDLLTKWQSLAPTFPEDLMIRVMAQAQ KAVFEGLYLGTCDALLPLVTSRFPELGVNRSHCNEMSWVQSIAFIHLGKNATVKDILNRT SSIRAFGKYKSDYVTQPLSKATWDTIYKDWFSKPGSGIMIMDPYGATISKPGEADTPFPH RKGMLYNIQYITFWFGEGAPAEAPIKWIRDFYAFMEPYVTKNPRQAYVNYRDLDLGVNAV EAGANVSCYQVGKVWGEKYFKGNFERLARTKAKVDPTDFFRNEQSIPPLLA

Transcript Sequence

Transcript ID	Os06t0548800-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:6:20767656:20769684:-1 gene:Os06g0548800 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Nectarin 5 (Fragment). (Os06t0548800-01)
Sequence	AAGCTGCATGCCATGGCGAGGACGTCGATGACGACGACATCCAGGGCCCTCGCGCTGGTG CTCCTCTCGTCTTGCTGCCTCCTCGTCGCCGTCGACGCGGCCTACGCCAAGAAGCCGAAT CTGTCCAAGAATGACTTCCTCTCCTGCCTAGCCGCCGGCATCCCCGCCCGGCAGCTGTAC GCCAAGGGCTCGCCGTCGTACGGCTCCGTGCTGACGTCCACCATCCGGAACCTCAGGTAC TTGTCGTCCAAGACGTGCAACCCGCTGTACATCGTCACACCGACCGACGTGAAGCACATC CAGGTGGCCGTCTCCTGCGGCCGCCGCCACAACGTCCGCATCCGCGTGCGCAGCGGCGGC CACGACTACGAGGGCCTCTCGTACCGGTCGGAGATCCCCGAGCCGTTCGCCATCGTCGAC CTCGTCAACATGCGGAACGTGACCGTCGACGGCAAGGCGCGCACGGCGTGGGTGGAGTCC GGCGCGCAGATCGGCGAGCTCTACTACGGCATCTCCAAGGCGAGCCCCACGCTGGCGTTC CCGGCGGGCGTGTGCCCGACCATCGGCGTCGGGGGCCACTTCAGCGGCGGCGGGTTCGGC ATGCTGCTGCGCAAGTTCGGCCTCGCGTCCGACAACGTGCTCGACGTGAAGGTGGTGGAC GCGAACGGCAAGGTGCAGGACCGGAAGTCGATGGGGGAGGACTACTTATGGGCCGTCCGC GGCGGCGGCGGCTCGAGCTTCGGGATCGTGGTGTCGTGGAAGCTGAGGCTGTTGCCGGTG CCGGCGACGGTGACGGTGATCCAGATGCCCAAGATGGTGAACGAGGGCGCCGTCGACCTC CTCACCAAGTGGCAGTCCCTCGCGCCGACGTTCCCGGAAGACCTGATGATCCGCGTGATG GCGCAGGCGCAGAAGGCCGTGTTCGAGGGCCTCTACCTCGGCACCTGCGACGCGCTCCTC CCGCTGGTGACCAGCCGCTTCCCGGAGCTGGGCGTCAACCGCTCCCACTGCAACGAGATG TCATGGGTGCAATCCATCGCGTTCATCCACCTGGGCAAGAACGCCACCGTCAAGGACATC CTCAACCGGACCTCCTCCATCCGAGCCTTCGGCAAGTACAAGTCGGACTACGTGACGCAG CCACTGTCCAAGGCGACATGGGACACCATCTACAAGGACTGGTTCTCCAAGCCGGGCTCC GGCATCATGATCATGGACCCGTACGGCGCCACCATCAGCAAACCCGGCGAGGCGGACACG CCGTTCCCGCACCGGAAGGGGATGCTGTACAACATCCAGTACATCACCTTCTGGTTCGGC GAGGGCGCGCCGGCGGAGGCGCCGATCAAGTGGATCAGGGACTTCTACGCGTTCATGGAG CCGTACGTCACCAAGAACCCGAGGCAGGCGTACGTCAACTACAGGGACCTCGACCTCGGC GTCAACGCCGTCGAGGCCGGCGCCAACGTCTCCTGCTACCAGGTCGGCAAGGTGTGGGGC GAGAAGTACTTCAAGGGCAACTTCGAGAGGCTCGCCAGGACGAAGGCCAAGGTGGATCCC ACCGACTTCTTCAGGAACGAGCAGAGCATTCCTCCATTGCTCGCGTGATCGATCGATCGA CAGAAATTAATCATCGACGGAAACGCACAATTTGCATCGAGATTTAATTAGTGTGTGTGA GTGGTGAGTACGATTAATTAAGTACTTGGACGTGTCACATGTCCAACAAATAAAGATCAA CCAACTAACGTATAATCGTAAGAAGATTATTGTTTTTTTTTCTTTTTCATACACGTGTGC GCGTATGAGTTCTACTTCCTCCGTTTTATAATGTAAAACTTTCTAGCATTGCCCACGTTC ATTTATATGTTAATGAATCTAGATATATGTATGTGTTTAAATTCATTAACATCTATATGT ATATGAGCAATGTTAGAAATTCTTATATTATGAAACGGAGGGAGTAGCTAGTAGCGTTTT ACATTTCAATGTTCGTGCCATCCACTTAATTTATTGCGTGATGAGATTC