Gene sequences

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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os06t0546500-01
CDS Infomation	cds chromosome:IRGSP-1.0:6:20676206:20677666:-1 gene:Os06g0546500 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:class III peroxidase 88 description:Similar to Class III peroxidase GvPx2b (Fragment). (Os06t0546500-01)
Sequence	ATGGCTACTCAATGGGTGCTCGTGGTGGTTGCTGTAATGGCCGTGCTCTTCGCCGGAGGC GCCGCCGGCGGGCAGCTGTCGACGAGGTACTACGACGGCAAGTGCCCGAACGTGCAGAGC ATCGTGAGGGCCGGGATGGCGCAGGCCGTGGCGGCGGAGCCCCGGATGGGCGCCTCCATC CTCCGCATGTTCTTCCACGACTGCTTCGTCAACGGGTGCGACGCGTCCATCTTGCTCGAC GACACGGCCAACTTCACCGGCGAAAAGAACGCCGGGCCGAACGCCAACTCGGTGCGCGGG TACGAGGTGATCGACGCCATCAAGACCCAGGTCGAGGCGTCCTGCAACGCCACCGTCTCC TGCGCCGACATCCTCGCCCTCGCCGCGCGCGACGCCGTCAACCTGCTGGGCGGGCCGACG TGGACGGTGCAGCTGGGTCGCCGCGACGCGCTGACGGCGAGCCAGAGCGCGGCGAACGGC AACCTGCCGGGGCCGGGGTCCGACCTCGCCACGCTCGTCACCATGTTCGGCAACAAGGGG CTGTCGCCGCGGGACATGACGGCGCTGTCGGGCGCGCACACGCTGGGGCAGGCCCGGTGC GCCACGTTCCGCAGCCGCATCTTCGGCGACGGCAACGTCGACGCCGCCTTCGCCGCGCTC CGGCAGCAGGCGTGCCCGCAGTCCGGCGGCGACACGACGCTGGCGCCCATCGACGTGCAG ACGCCCGACGCGTTCGACAACGCCTACTACGCGAACCTGGTGAAGAAGCAGGGGCTGTTC CACTCCGACCAGGAGCTGTTCAACGGCGGGTCGCAGGACGCGCTGGTGAGGAAGTACGCC GGCAACGCCGGCATGTTCGCCGCCGACTTCGCCAAGGCGATGGTGAGGATGGGCGCCCTC CTGCCGGCGGCCGGGACGCCGACCGAGGTCCGTCTGAACTGTAGGAAGGTCAACTAA

Peptide Sequence

PEP ID	Os06t0546500-01
PEP Infomation	pep chromosome:IRGSP-1.0:6:20676206:20677666:-1 gene:Os06g0546500 transcript:Os06t0546500-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:class III peroxidase 88 description:Similar to Class III peroxidase GvPx2b (Fragment). (Os06t0546500-01)
Sequence	MATQWVLVVVAVMAVLFAGGAAGGQLSTRYYDGKCPNVQSIVRAGMAQAVAAEPRMGASI LRMFFHDCFVNGCDASILLDDTANFTGEKNAGPNANSVRGYEVIDAIKTQVEASCNATVS CADILALAARDAVNLLGGPTWTVQLGRRDALTASQSAANGNLPGPGSDLATLVTMFGNKG LSPRDMTALSGAHTLGQARCATFRSRIFGDGNVDAAFAALRQQACPQSGGDTTLAPIDVQ TPDAFDNAYYANLVKKQGLFHSDQELFNGGSQDALVRKYAGNAGMFAADFAKAMVRMGAL LPAAGTPTEVRLNCRKVN

Transcript Sequence

Transcript ID	Os06t0546500-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:6:20676206:20677666:-1 gene:Os06g0546500 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:class III peroxidase 88 description:Similar to Class III peroxidase GvPx2b (Fragment). (Os06t0546500-01)
Sequence	TCAAGCAACCACTGGTAGTACACTGCAAATATTCCTCTTGCCGTGTCACTGGCTTGCTCT GCTCGATCACGAGCTTGAACTGTGCTTGTGATCAGCGAGCAATGGCTACTCAATGGGTGC TCGTGGTGGTTGCTGTAATGGCCGTGCTCTTCGCCGGAGGCGCCGCCGGCGGGCAGCTGT CGACGAGGTACTACGACGGCAAGTGCCCGAACGTGCAGAGCATCGTGAGGGCCGGGATGG CGCAGGCCGTGGCGGCGGAGCCCCGGATGGGCGCCTCCATCCTCCGCATGTTCTTCCACG ACTGCTTCGTCAACGGGTGCGACGCGTCCATCTTGCTCGACGACACGGCCAACTTCACCG GCGAAAAGAACGCCGGGCCGAACGCCAACTCGGTGCGCGGGTACGAGGTGATCGACGCCA TCAAGACCCAGGTCGAGGCGTCCTGCAACGCCACCGTCTCCTGCGCCGACATCCTCGCCC TCGCCGCGCGCGACGCCGTCAACCTGCTGGGCGGGCCGACGTGGACGGTGCAGCTGGGTC GCCGCGACGCGCTGACGGCGAGCCAGAGCGCGGCGAACGGCAACCTGCCGGGGCCGGGGT CCGACCTCGCCACGCTCGTCACCATGTTCGGCAACAAGGGGCTGTCGCCGCGGGACATGA CGGCGCTGTCGGGCGCGCACACGCTGGGGCAGGCCCGGTGCGCCACGTTCCGCAGCCGCA TCTTCGGCGACGGCAACGTCGACGCCGCCTTCGCCGCGCTCCGGCAGCAGGCGTGCCCGC AGTCCGGCGGCGACACGACGCTGGCGCCCATCGACGTGCAGACGCCCGACGCGTTCGACA ACGCCTACTACGCGAACCTGGTGAAGAAGCAGGGGCTGTTCCACTCCGACCAGGAGCTGT TCAACGGCGGGTCGCAGGACGCGCTGGTGAGGAAGTACGCCGGCAACGCCGGCATGTTCG CCGCCGACTTCGCCAAGGCGATGGTGAGGATGGGCGCCCTCCTGCCGGCGGCCGGGACGC CGACCGAGGTCCGTCTGAACTGTAGGAAGGTCAACTAAAGTCAACCTGATGACGAACGTG TCCAAGAACTACAAGTGTAGTGAACAGTCAAGATGGCTGTTTCTGCTCCTTTGGATTTAT TTTTGTGATCTGGTTAATATTTTTATTATTTGTGGAATTAATAATGTTGCTGTAAACATC TTTTGATAGCTGCCAGTCAGTCAATGATCATCTGTAAGCATAAAAAAACGTTTGAAAATA TGTTGCACATGTTTTTGTG