Gene sequences

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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os06t0542200-01
CDS Infomation	cds chromosome:IRGSP-1.0:6:20400347:20403399:1 gene:Os06g0542200 gene_biotype:protein_coding transcript_biotype:protein_coding description:Prephenate dehydrogenase domain containing protein. (Os06t0542200-01)
Sequence	ATGGCGTCCTCCCCGCGCCATTCCACCCACCACCCCACCTTGCTCCTCCGCCGCCACTAC CCCAACTTCTGCGCCCTCGCCCCCCTCCGCCCGACCAGGCAACTCCCCAGCCTTCCCCAG CAGCAGCTGCAGCAGAAGCAGCACGTTGGCCATGATCCGTCGCCGTCGGAGCCCACCACC GCGGCCGCCTCGCCGGCGACGGCGGCGGCGGCGGGGGCGCTGCGTGTGGGGATCGTCGGG TTCGGCAACTTCGGGCAGTTCATCGCGGGGGGGATCCAGCGGCAGGGGCACGCGGTGCTG GCCACCTCCAGATCCGACTACTCGGGCTACTGCGCCCGCCACGGGATCCGCTTCTTCGCC ACCGCCGACGAGCTCTGCGAGGCCGGGCCCGACGTCCTGCTCGTCTGCAGCTCCATCCTC TCCACCGAGGCCGTCGTCCGCGCCATCCCCTTCCGCAAGCTCCGCCCCGGAACCCTCGTC GCCGACGTGCTCTCCGTCAAGCAGTTCCCCCGCAACCTCCTCCTCGAGATCCTCCCTCCG GGGTTCGGGATTGTATGTACGCACCCCATGTTTGGGCCGGAGAGTGGAAAGCATGGCTGG AGTGGGCTACCTTTTGTCTATGACAAGGTCCGTGTTGCCAAGGAAGGGGATCAGGCGGCC AAGTGCGAACAGTTCTTGAGCATCTTTGAGCGGGAGGGATGTAGGATGGTGGAGATGTTG TGCGAAGAGCATGATCGCTATGCCGCGGGAAGTCAGTTCATCACTCACACTATTGGGAGG ATTTTGTCACAGCTAAACCTTGAGTCCACACCAATCAACACCAAGGGTTATGAGACCCTT CTGCAACTTACTAAGAACACGATAAGTGATAGTTTCGATCTGTACTATGGGCTTTTCATG TACAATGTGAATGCCACAGAACAGATAGACAACCTGGACAGGGCATTTGAGAAGGTGAAG CAGATGCTCTATGGTAGGCTGCATAATGTACTAAGAAAGCAGATAGAAGAGAGGGTCCCA ATCCCGTAG

Peptide Sequence

PEP ID	Os06t0542200-01
PEP Infomation	pep chromosome:IRGSP-1.0:6:20400347:20403399:1 gene:Os06g0542200 transcript:Os06t0542200-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Prephenate dehydrogenase domain containing protein. (Os06t0542200-01)
Sequence	MASSPRHSTHHPTLLLRRHYPNFCALAPLRPTRQLPSLPQQQLQQKQHVGHDPSPSEPTT AAASPATAAAAGALRVGIVGFGNFGQFIAGGIQRQGHAVLATSRSDYSGYCARHGIRFFA TADELCEAGPDVLLVCSSILSTEAVVRAIPFRKLRPGTLVADVLSVKQFPRNLLLEILPP GFGIVCTHPMFGPESGKHGWSGLPFVYDKVRVAKEGDQAAKCEQFLSIFEREGCRMVEML CEEHDRYAAGSQFITHTIGRILSQLNLESTPINTKGYETLLQLTKNTISDSFDLYYGLFM YNVNATEQIDNLDRAFEKVKQMLYGRLHNVLRKQIEERVPIP

Transcript Sequence

Transcript ID	Os06t0542200-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:6:20400347:20403399:1 gene:Os06g0542200 gene_biotype:protein_coding transcript_biotype:protein_coding description:Prephenate dehydrogenase domain containing protein. (Os06t0542200-01)
Sequence	ACCACCTACCACACTCACTGATGAGTGATGACTGATCTATCAACCAAACCAACTCCCAAC TCCTCCCTCCCTCCGCCGCGCCACGCCCACCCACGCATCCATCCATCGATCGCAGCCAAA TTCTACTCGAGCTGAGCGCTCCGAGCTCTCTCGATCGATCATGGCGTCCTCCCCGCGCCA TTCCACCCACCACCCCACCTTGCTCCTCCGCCGCCACTACCCCAACTTCTGCGCCCTCGC CCCCCTCCGCCCGACCAGGCAACTCCCCAGCCTTCCCCAGCAGCAGCTGCAGCAGAAGCA GCACGTTGGCCATGATCCGTCGCCGTCGGAGCCCACCACCGCGGCCGCCTCGCCGGCGAC GGCGGCGGCGGCGGGGGCGCTGCGTGTGGGGATCGTCGGGTTCGGCAACTTCGGGCAGTT CATCGCGGGGGGGATCCAGCGGCAGGGGCACGCGGTGCTGGCCACCTCCAGATCCGACTA CTCGGGCTACTGCGCCCGCCACGGGATCCGCTTCTTCGCCACCGCCGACGAGCTCTGCGA GGCCGGGCCCGACGTCCTGCTCGTCTGCAGCTCCATCCTCTCCACCGAGGCCGTCGTCCG CGCCATCCCCTTCCGCAAGCTCCGCCCCGGAACCCTCGTCGCCGACGTGCTCTCCGTCAA GCAGTTCCCCCGCAACCTCCTCCTCGAGATCCTCCCTCCGGGGTTCGGGATTGTATGTAC GCACCCCATGTTTGGGCCGGAGAGTGGAAAGCATGGCTGGAGTGGGCTACCTTTTGTCTA TGACAAGGTCCGTGTTGCCAAGGAAGGGGATCAGGCGGCCAAGTGCGAACAGTTCTTGAG CATCTTTGAGCGGGAGGGATGTAGGATGGTGGAGATGTTGTGCGAAGAGCATGATCGCTA TGCCGCGGGAAGTCAGTTCATCACTCACACTATTGGGAGGATTTTGTCACAGCTAAACCT TGAGTCCACACCAATCAACACCAAGGGTTATGAGACCCTTCTGCAACTTACTAAGAACAC GATAAGTGATAGTTTCGATCTGTACTATGGGCTTTTCATGTACAATGTGAATGCCACAGA ACAGATAGACAACCTGGACAGGGCATTTGAGAAGGTGAAGCAGATGCTCTATGGTAGGCT GCATAATGTACTAAGAAAGCAGATAGAAGAGAGGGTCCCAATCCCGTAGCCCCTTCAGTA AATATCAAATGAAGCCCAGTCCAGTGCTGCTGGGGCCTGGGAGCCTGGGACCCCTCTCTT CTCTCCTGTAAGGTTGTATCCACACAGAAGAAGTTGCACATATCCCATATCTCTGCTACA CCCACCCCTACACTTGACAAAACAGAGAATTAGGCTAATACCATGGCAAATAGGTGACAA TTGGAAAATACCATCACATATGTGAATAACATGTGGGTCCTAGGTTAAAATATCAATGTC ATAGGCAATAATTTTTTCAAACCCTGTTGTGATATTTTCATTGGTACCAAGATACTAATT CTAGATGTCTTTCTCAGTGTTGTGATAGGAGCTGTATGCATTCAATGTTTCTCTTAGGTG TTAGCTAAATATGCAAGGAATAAGATGTAACCATGTCCTCTGTTTTTGTTCTTTCATGAG TTGTAACGAAATTCTTTTGTTCTTTTACACTGAGCATGAAACAAGTTATGATATAAGAGA ATGCTTGTTTG