Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os06t0539400-01
CDS Infomation	cds chromosome:IRGSP-1.0:6:20251679:20253928:1 gene:Os06g0539400 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:cationic amino acid transporter 6 description:Amino acid/polyamine transporter I family protein. (Os06t0539400-01)
Sequence	ATGGCGACGGCGGCGGCGGCGGGAGAGGGAGGGAGTGGGCGGCGGTACTGGCGGTGGAGT AAGGCGGACTTCTTCCCGGAGCCGTCGTTCGCGAGCTGGCGGTCCTACGGCGGCGCGCTC GCGGCCACCGTGCCGCGGCTGGTTGACCGCGTGGGGAGCCGCTCGTCGGAGGCGGCGGAG GCCGGCACGCTGCGCGCCGTGAGCGAGAACCCGCTGCGGCGGTGCCTGTCGTGGCTGGAC CTCGCGTTCCTCGGGTTCGGCTCCGTCGTCGGCTCCGGGGTGTTCGTGCTCACCGGCCAG GAGGCGCGCTTCGACGCCGGCCCGGCGATCCCGCTCGCGTACGCCGCGGCGGGGTTCTCC GCGCTGCTGTCGTCCTTCTGCTACGCCGAGCTCGCCACGGAGATCCCCTCCGCGGGGGGC TCGTTCTCGTACCTCCGCGTCGAGCTCGGCGACATCGCGGCGTTCCTCGCCGCCGGGAAC ATACTGCTGGAGGCCGTCGTCGGGGCGGCCGGGCTTGGGAGGTCGTGGACGTCGTACCTC GCCGCGCTCCTCGGCCGCGACACCGACTCGCTCCGCATCCACGTCCCGGCGCTCGCCGAG GGGTTCAATCTGCTCGACCCCATCGCCGTCGTGGTGCTCGTCAGCACCTCCGCGGTGGCC ATGTCCGGGGCGCGCCTCACGTCCACGCTCAACTCGCTGGCGTCGGTGGTCGGCATCGCC ATCATCGCGTTCGTGCTGGCCGCGGGGTTCTCCCACTTCGACGCCGGCAACCTCGCGCCG TCCTTCTTCCCCTTCGGCGCCGCGGGCGTGTTCCGCGCGGCGGGGGTGGTGTACTGGTCG TACACCGGGTTCGACATGGTGGCCACCATGGCGGAGGAGACCAAGAACCCCGGCCGCGAC GTGCCCCTGGGGCTCATCTCGTCCATGTCCTCCATCACCGTCGTGTACTGCCTCATGTCG CTGGCGCTGGTCGGGATGCAGCGGTACACCGAGATCGACGCCAACGCCGCCTACTCGGTG GCGTTCGCCGCGGCCGGGATGAGGTGGGCGCGCTACGTGGTGGCTCTCGGCGCGCTCAAG GGGATGACGAGCGGCCTCCTCGTCGGCGCGCTGGGGCAGGCGAGGTACACGACGCAGATC GCGCGGACGCACATGATCCCGCCGTACTTCGCGCTCGTCCACCCGACGACCGGCACGCCC ATCTACGCCACCGTCGCCGTCACGCTCGGCGCCGCCTGCGTCGCGCTCTTCTCCAGCCTC GACGTGCTCGCCTCCGTCTCCTCCATCAGCACGCTCTTCATCTTCGCGCTCGTCGCCGTG GCGCTCCTCGTCCGCCGCTACCACGTCGCGGGGGCGACGACGCCGGGGCAGCTGCGCACC TTCCTCGCGTTCCTCGCGCTCGTCGTGCTCTCCTCCATCGGCGTCTCGGCCTACTACAAC TCCCGGTACGCGCGGCGGTGGCCAGGGTACGCGGCGTTCGGCTGCGGGTGGGCGGCGGGG GCGGCGGGGCTGGCGGCGTGCGCGGAGAAGCAGCGGGCGCCGCGGGTGTACGGCGCGCCG CTGGTGCCGTGGCTGCCGGCCATGTCCATCGCCACCAACCTCTTCCTGATGGGGTCGCTG GGCACCGCGGCGTACGCCCGCTTCGGCATCTGCACGGCCGCCATGCTCGTCTACTACGTG CTCTTCGGCGTGCACGCCACCTACGACGTCGCGCACGCGGACGACGCGGCTGCCGACAAC CTCGAGCACGGCAAGATCGCGGCGGCGCCCGCGCCCACGACGCCGGCGTGA

Peptide Sequence

PEP ID	Os06t0539400-01
PEP Infomation	pep chromosome:IRGSP-1.0:6:20251679:20253928:1 gene:Os06g0539400 transcript:Os06t0539400-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:cationic amino acid transporter 6 description:Amino acid/polyamine transporter I family protein. (Os06t0539400-01)
Sequence	MATAAAAGEGGSGRRYWRWSKADFFPEPSFASWRSYGGALAATVPRLVDRVGSRSSEAAE AGTLRAVSENPLRRCLSWLDLAFLGFGSVVGSGVFVLTGQEARFDAGPAIPLAYAAAGFS ALLSSFCYAELATEIPSAGGSFSYLRVELGDIAAFLAAGNILLEAVVGAAGLGRSWTSYL AALLGRDTDSLRIHVPALAEGFNLLDPIAVVVLVSTSAVAMSGARLTSTLNSLASVVGIA IIAFVLAAGFSHFDAGNLAPSFFPFGAAGVFRAAGVVYWSYTGFDMVATMAEETKNPGRD VPLGLISSMSSITVVYCLMSLALVGMQRYTEIDANAAYSVAFAAAGMRWARYVVALGALK GMTSGLLVGALGQARYTTQIARTHMIPPYFALVHPTTGTPIYATVAVTLGAACVALFSSL DVLASVSSISTLFIFALVAVALLVRRYHVAGATTPGQLRTFLAFLALVVLSSIGVSAYYN SRYARRWPGYAAFGCGWAAGAAGLAACAEKQRAPRVYGAPLVPWLPAMSIATNLFLMGSL GTAAYARFGICTAAMLVYYVLFGVHATYDVAHADDAAADNLEHGKIAAAPAPTTPA

Transcript Sequence

Transcript ID	Os06t0539400-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:6:20251679:20253928:1 gene:Os06g0539400 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:cationic amino acid transporter 6 description:Amino acid/polyamine transporter I family protein. (Os06t0539400-01)
Sequence	ATCGATCTCTCCAACCCACCCGCCCGCCGCACTATCTCCAGCTCTTCCATGGCGATGGCT TGTCGGTGGTTGGTGGTGGTTAGCTAACACGCGGCATCTTCTCCTCCGTCCATTCGTCCG TGTCAGCGTGTGTGTTGCCGGTGATGGCGACGGCGGCGGCGGCGGGAGAGGGAGGGAGTG GGCGGCGGTACTGGCGGTGGAGTAAGGCGGACTTCTTCCCGGAGCCGTCGTTCGCGAGCT GGCGGTCCTACGGCGGCGCGCTCGCGGCCACCGTGCCGCGGCTGGTTGACCGCGTGGGGA GCCGCTCGTCGGAGGCGGCGGAGGCCGGCACGCTGCGCGCCGTGAGCGAGAACCCGCTGC GGCGGTGCCTGTCGTGGCTGGACCTCGCGTTCCTCGGGTTCGGCTCCGTCGTCGGCTCCG GGGTGTTCGTGCTCACCGGCCAGGAGGCGCGCTTCGACGCCGGCCCGGCGATCCCGCTCG CGTACGCCGCGGCGGGGTTCTCCGCGCTGCTGTCGTCCTTCTGCTACGCCGAGCTCGCCA CGGAGATCCCCTCCGCGGGGGGCTCGTTCTCGTACCTCCGCGTCGAGCTCGGCGACATCG CGGCGTTCCTCGCCGCCGGGAACATACTGCTGGAGGCCGTCGTCGGGGCGGCCGGGCTTG GGAGGTCGTGGACGTCGTACCTCGCCGCGCTCCTCGGCCGCGACACCGACTCGCTCCGCA TCCACGTCCCGGCGCTCGCCGAGGGGTTCAATCTGCTCGACCCCATCGCCGTCGTGGTGC TCGTCAGCACCTCCGCGGTGGCCATGTCCGGGGCGCGCCTCACGTCCACGCTCAACTCGC TGGCGTCGGTGGTCGGCATCGCCATCATCGCGTTCGTGCTGGCCGCGGGGTTCTCCCACT TCGACGCCGGCAACCTCGCGCCGTCCTTCTTCCCCTTCGGCGCCGCGGGCGTGTTCCGCG CGGCGGGGGTGGTGTACTGGTCGTACACCGGGTTCGACATGGTGGCCACCATGGCGGAGG AGACCAAGAACCCCGGCCGCGACGTGCCCCTGGGGCTCATCTCGTCCATGTCCTCCATCA CCGTCGTGTACTGCCTCATGTCGCTGGCGCTGGTCGGGATGCAGCGGTACACCGAGATCG ACGCCAACGCCGCCTACTCGGTGGCGTTCGCCGCGGCCGGGATGAGGTGGGCGCGCTACG TGGTGGCTCTCGGCGCGCTCAAGGGGATGACGAGCGGCCTCCTCGTCGGCGCGCTGGGGC AGGCGAGGTACACGACGCAGATCGCGCGGACGCACATGATCCCGCCGTACTTCGCGCTCG TCCACCCGACGACCGGCACGCCCATCTACGCCACCGTCGCCGTCACGCTCGGCGCCGCCT GCGTCGCGCTCTTCTCCAGCCTCGACGTGCTCGCCTCCGTCTCCTCCATCAGCACGCTCT TCATCTTCGCGCTCGTCGCCGTGGCGCTCCTCGTCCGCCGCTACCACGTCGCGGGGGCGA CGACGCCGGGGCAGCTGCGCACCTTCCTCGCGTTCCTCGCGCTCGTCGTGCTCTCCTCCA TCGGCGTCTCGGCCTACTACAACTCCCGGTACGCGCGGCGGTGGCCAGGGTACGCGGCGT TCGGCTGCGGGTGGGCGGCGGGGGCGGCGGGGCTGGCGGCGTGCGCGGAGAAGCAGCGGG CGCCGCGGGTGTACGGCGCGCCGCTGGTGCCGTGGCTGCCGGCCATGTCCATCGCCACCA ACCTCTTCCTGATGGGGTCGCTGGGCACCGCGGCGTACGCCCGCTTCGGCATCTGCACGG CCGCCATGCTCGTCTACTACGTGCTCTTCGGCGTGCACGCCACCTACGACGTCGCGCACG CGGACGACGCGGCTGCCGACAACCTCGAGCACGGCAAGATCGCGGCGGCGCCCGCGCCCA CGACGCCGGCGTGACACAAGGTGAACGTGTTGATTATAGTTGATGGTTAGTCAAGGAGAT GGTCACATTAGTCATTAATTAGTACGTTCTTTGAATTATCAGGATACATTTCACATTTAT TAAGTGGCCGATCTAGATTTTTTTTTTCAGAGCATTAGCAAGCACAATTAGAGGGGTCGA AAATTGAAACCATTAAAATGGTGTGATCCGCCTTATCCACCCATGCATTTAGTTGGAACT CTATGAGCAGAGGTTTTTCTTTTTCCAATTACATTTAGAAATGAAATGTTTTGTATAAAT TACCGTGAAATTTGTTCTGAAATCTGTATT