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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os06t0537700-01
CDS Infomation

cds chromosome:IRGSP-1.0:6:20145118:20148062:-1 gene:Os06g0537700 gene_biotype:protein_coding transcript_biotype:protein_coding description:X8 domain containing protein. (Os06t0537700-01)
Sequence

ATGCCCGCCGCCTCCTCGCCTCTTCCCCTCCCCCTTCTCCTCCTCCTCCTCCTCGCCGTC
GCCGGCGCCGGCGCCGCGGGTGCGGGGGCGGGGGTGGGGGTGAGCGGCGGGGGGCAGCTG
TGGTGCGTGGCGAAGAACAACGCGGACGACGCGGCGCTGCAGGCGGCGGTGGACTGGGCG
TGCGGCCCCGCGGGGGGTGCCGACTGCCGCGCCATCCAGCAGGGCGGCGCCTGCTACGAC
CCGCCCGACCTCCTCGCCCACGCCTCCTACGCCTTCAACGACTACTTCCTCCGCGCCGGC
GGCGCCCCCGCCGCCCCCGCCGCCTGCGACTTCTCCGGCGCCGCCGCCCTCACCGCCCTC
AACCCCAGCCATGGCAGCTGCGTGTTTCCTTCCAGCACATCTCCAAAAAATGGCAGCTTC
ACAGGAACAACAACTTATGGTCCAGCTGGTGCAGATTTAAGCAAAAGTTCTTCCAGGCAA
CTGAATTTCTGGTCATTGTTGTTATGCATATGTCTGTCTGTAACATTTTTCGATGCCTTC
CCTTCTGATACATTTTCATAA

Peptide Sequence

PEP ID

Os06t0537700-01
PEP Infomation

pep chromosome:IRGSP-1.0:6:20145118:20148062:-1 gene:Os06g0537700 transcript:Os06t0537700-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:X8 domain containing protein. (Os06t0537700-01)
Sequence

MPAASSPLPLPLLLLLLLAVAGAGAAGAGAGVGVSGGGQLWCVAKNNADDAALQAAVDWA
CGPAGGADCRAIQQGGACYDPPDLLAHASYAFNDYFLRAGGAPAAPAACDFSGAAALTAL
NPSHGSCVFPSSTSPKNGSFTGTTTYGPAGADLSKSSSRQLNFWSLLLCICLSVTFFDAF
PSDTFS

Transcript Sequence

Transcript ID

Os06t0537700-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:6:20145118:20148062:-1 gene:Os06g0537700 gene_biotype:protein_coding transcript_biotype:protein_coding description:X8 domain containing protein. (Os06t0537700-01)
Sequence

ACTAATCACAGCTCACTTCAGCTCGCTCGCTCTCACTACTACTCGCTGGCACCATTCAGG
CGGATCCAATGCCCGCCGCCTCCTCGCCTCTTCCCCTCCCCCTTCTCCTCCTCCTCCTCC
TCGCCGTCGCCGGCGCCGGCGCCGCGGGTGCGGGGGCGGGGGTGGGGGTGAGCGGCGGGG
GGCAGCTGTGGTGCGTGGCGAAGAACAACGCGGACGACGCGGCGCTGCAGGCGGCGGTGG
ACTGGGCGTGCGGCCCCGCGGGGGGTGCCGACTGCCGCGCCATCCAGCAGGGCGGCGCCT
GCTACGACCCGCCCGACCTCCTCGCCCACGCCTCCTACGCCTTCAACGACTACTTCCTCC
GCGCCGGCGGCGCCCCCGCCGCCCCCGCCGCCTGCGACTTCTCCGGCGCCGCCGCCCTCA
CCGCCCTCAACCCCAGCCATGGCAGCTGCGTGTTTCCTTCCAGCACATCTCCAAAAAATG
GCAGCTTCACAGGAACAACAACTTATGGTCCAGCTGGTGCAGATTTAAGCAAAAGTTCTT
CCAGGCAACTGAATTTCTGGTCATTGTTGTTATGCATATGTCTGTCTGTAACATTTTTCG
ATGCCTTCCCTTCTGATACATTTTCATAAACTCCTCTCTGCTAGTATATGATAAACTACT
GGACTGCAGAAATGCAATTTGTTGTACTTGTGGTTGAAGCATCATTTCTTTGCAAGTCTG
TGTAGAGAAAAGGAATACTCTTTTCAAGCTTCCCCTTTTCCCTCCTGTTATTTAATGAGC
ATTTAAAGGGGTCCTTGCCATCTC