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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os06t0537600-01
CDS Infomation

cds chromosome:IRGSP-1.0:6:20143945:20144666:1 gene:Os06g0537600 gene_biotype:protein_coding transcript_biotype:protein_coding description:Zinc finger, RING/FYVE/PHD-type domain containing protein. (Os06t0537600-01)
Sequence

ATGCGCCTCGAGATGTCACCCGACAACCTCCTCTTCTTCTGCTCCGTCGCGGCGTCGGCG
GCCGCTGGATTCTGCCTCTTCTCGCTGTACCGGCGGCTCGCGCGGCGGTGCCACCACCAC
CACGCGGCGCCTGCCGGAGGATCGGAAGAGGAGGAGGAGGAGCGCCGGCGGCTGACCGCG
GTGGCCTCCGGCCTCCCGGCGTTCATGTACGACCGGCTGGTCCGGCACAGCGGCAAGGGC
GCGAGCTGGACGGAGTGCGCCGTCTGCCTCGGCGTCATCCATGTCGGCGCCATGGTGAAG
CTGCTGCCGGCGTGCGCCCACATCTACCACGTCGACTGCATCGACCTGTGGCTGTCTTCC
CACCCGACGTGCCCCCTCTGCCGGTGCAGGGTTGATCATCCTGGGCAGGGGCAGGAGACG
GCCAGGCAGCTTGCCCAGCTTTCCCCAGCATAG

Peptide Sequence

PEP ID

Os06t0537600-01
PEP Infomation

pep chromosome:IRGSP-1.0:6:20143945:20144666:1 gene:Os06g0537600 transcript:Os06t0537600-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Zinc finger, RING/FYVE/PHD-type domain containing protein. (Os06t0537600-01)
Sequence

MRLEMSPDNLLFFCSVAASAAAGFCLFSLYRRLARRCHHHHAAPAGGSEEEEEERRRLTA
VASGLPAFMYDRLVRHSGKGASWTECAVCLGVIHVGAMVKLLPACAHIYHVDCIDLWLSS
HPTCPLCRCRVDHPGQGQETARQLAQLSPA

Transcript Sequence

Transcript ID

Os06t0537600-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:6:20143945:20144666:1 gene:Os06g0537600 gene_biotype:protein_coding transcript_biotype:protein_coding description:Zinc finger, RING/FYVE/PHD-type domain containing protein. (Os06t0537600-01)
Sequence

ATGCCTACCTGAATTCTTGAGCTCATCCTCTCCCGGCATCATCATCATCATCATCACCAC
CACCATGCGCCTCGAGATGTCACCCGACAACCTCCTCTTCTTCTGCTCCGTCGCGGCGTC
GGCGGCCGCTGGATTCTGCCTCTTCTCGCTGTACCGGCGGCTCGCGCGGCGGTGCCACCA
CCACCACGCGGCGCCTGCCGGAGGATCGGAAGAGGAGGAGGAGGAGCGCCGGCGGCTGAC
CGCGGTGGCCTCCGGCCTCCCGGCGTTCATGTACGACCGGCTGGTCCGGCACAGCGGCAA
GGGCGCGAGCTGGACGGAGTGCGCCGTCTGCCTCGGCGTCATCCATGTCGGCGCCATGGT
GAAGCTGCTGCCGGCGTGCGCCCACATCTACCACGTCGACTGCATCGACCTGTGGCTGTC
TTCCCACCCGACGTGCCCCCTCTGCCGGTGCAGGGTTGATCATCCTGGGCAGGGGCAGGA
GACGGCCAGGCAGCTTGCCCAGCTTTCCCCAGCATAGATAGAATTCACCACGTCTGCAAG
AAATGTATTAGTTAGGAGTTAGGATTCTATTGGACTTTTTTCAAGAAAAAATGTGCATAT
GCCGTGTATCAATTGATGGATGTGAATGTAGTACCTGACTGGAAATGTGGATACAGTCAT
CAGGGTTTCATGAATTTCTTCAGATTGTTAATAGACTTCATTGCAAGATGAGCTTTTACC
AG