Gene sequences

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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os06t0534800-02
CDS Infomation	cds chromosome:IRGSP-1.0:6:20010570:20012023:1 gene:Os06g0534800 gene_biotype:protein_coding transcript_biotype:protein_coding description:Zinc finger, RING-type domain containing protein. (Os06t0534800-01);Zinc finger, RING-type domain containing protein. (Os06t0534800-02)
Sequence	ATGTCCTCGCCGCCGTCTGATCCGAGCTCCGGTGGTGGCGATGGCGGCTCGGCCGTGCCG GGGACGGCGAGCTCCAACTTCACGCTGCTGTACATCATCATCGCCGTCCTCGTCGGCGTG ATCCTGTACATGGCGATCCGGTACGGCCGGTCGGTGATGTCGGAGTGGCGCCAGCTGCAG GCCGGCGGCGGCGGCGGCGAGCCGCGCGCCGCGCTGCTCGGGCTGAGCTCGGACGACATC GACGCGCTCCCCACGTTCACGTACCGGGCGCGCGGGGCGGCGGCGTCGCCGCTGGTCGGC GGCGGCGGGAGGAGGGGCGGCGGCAGCGGCAAGGGGAAGGGGGCGACGACGGTGGTGGTG GAGTGCGTGGTGTGCCTGCAGGAGCTCGCCGACGGCGACGTGGTGCGCGTGCTGCCGGCG TGCAGGCACTTCTTCCACGGCGGCTGCATCGACCTCTGGCTGCGCGCCCACTCCACGTGC CCGGTGTGCCGCGCGCACCCGGAGCCCGACGGCGTGCGGCTCAGCGACGTCGTGGCCGTG TCGCCGCCGCTGCCGCAGCTGCGCCGGTGCGGCCTGTCGCCGGAGCGGCCCACGGCGGCG TCGCGCGCCCTGGCGGACATCCTGGCACGTTCTCCATTGAGGGGCAACACCACCTCGACG ACGACGACCACCACCACCGGCGGACCGATCACGTCGACGTCGTCGAAGTCGCCGTCGTCA CCGGTTCAAGCGGCGATCATCAACTACGTGCAGGCCTCACGTTCGCCGTCTCCGACGGCG TACCACAGCCTGAACGAGCGGTGGCCGAGCTCGCCGACGCCGGTTGTGGTTGTGCGGTCG AAGTCGCCGTCGCCGTCGTCGCCACCGATAGGTGGTCTGAGTCTGCAGACGACGACGGCG GCGGCGGCGAGAGGCGTCGGCGTGGTGGAAGGGGTGGATGCAGGTGCAACCACGTCGGCG TCGGCGTCGGCGCCAACGCAGGTGGTGGCGCTGTCAAGGGAAGGTGGTGGTTCGCGGTCC AAGTCGCCGTCGCCGGTGCCACATTAA

Peptide Sequence

PEP ID	Os06t0534800-02
PEP Infomation	pep chromosome:IRGSP-1.0:6:20010570:20012023:1 gene:Os06g0534800 transcript:Os06t0534800-02 gene_biotype:protein_coding transcript_biotype:protein_coding description:Zinc finger, RING-type domain containing protein. (Os06t0534800-01);Zinc finger, RING-type domain containing protein. (Os06t0534800-02)
Sequence	MSSPPSDPSSGGGDGGSAVPGTASSNFTLLYIIIAVLVGVILYMAIRYGRSVMSEWRQLQ AGGGGGEPRAALLGLSSDDIDALPTFTYRARGAAASPLVGGGGRRGGGSGKGKGATTVVV ECVVCLQELADGDVVRVLPACRHFFHGGCIDLWLRAHSTCPVCRAHPEPDGVRLSDVVAV SPPLPQLRRCGLSPERPTAASRALADILARSPLRGNTTSTTTTTTTGGPITSTSSKSPSS PVQAAIINYVQASRSPSPTAYHSLNERWPSSPTPVVVVRSKSPSPSSPPIGGLSLQTTTA AAARGVGVVEGVDAGATTSASASAPTQVVALSREGGGSRSKSPSPVPH

Transcript Sequence

Transcript ID	Os06t0534800-02
Transcript Infomation	cdna chromosome:IRGSP-1.0:6:20010570:20012023:1 gene:Os06g0534800 gene_biotype:protein_coding transcript_biotype:protein_coding description:Zinc finger, RING-type domain containing protein. (Os06t0534800-01);Zinc finger, RING-type domain containing protein. (Os06t0534800-02)
Sequence	TAGCGACCCAACTGAAAAAACCCTATCATGCGCGAAGCATGCATGCCTCGATCGATCTCG CACAACCACCCTCTTCTCCTCGATCGATCGAATGGTTGGTTCGGTTTGGTTTTGATTGAT CGATATTGCTTTTGTTTACCATTGCCATGTCCTTGAAACCGGGTGGTGTTCTTGGTCGCC GCCATGTCCTCGCCGCCGTCTGATCCGAGCTCCGGTGGTGGCGATGGCGGCTCGGCCGTG CCGGGGACGGCGAGCTCCAACTTCACGCTGCTGTACATCATCATCGCCGTCCTCGTCGGC GTGATCCTGTACATGGCGATCCGGTACGGCCGGTCGGTGATGTCGGAGTGGCGCCAGCTG CAGGCCGGCGGCGGCGGCGGCGAGCCGCGCGCCGCGCTGCTCGGGCTGAGCTCGGACGAC ATCGACGCGCTCCCCACGTTCACGTACCGGGCGCGCGGGGCGGCGGCGTCGCCGCTGGTC GGCGGCGGCGGGAGGAGGGGCGGCGGCAGCGGCAAGGGGAAGGGGGCGACGACGGTGGTG GTGGAGTGCGTGGTGTGCCTGCAGGAGCTCGCCGACGGCGACGTGGTGCGCGTGCTGCCG GCGTGCAGGCACTTCTTCCACGGCGGCTGCATCGACCTCTGGCTGCGCGCCCACTCCACG TGCCCGGTGTGCCGCGCGCACCCGGAGCCCGACGGCGTGCGGCTCAGCGACGTCGTGGCC GTGTCGCCGCCGCTGCCGCAGCTGCGCCGGTGCGGCCTGTCGCCGGAGCGGCCCACGGCG GCGTCGCGCGCCCTGGCGGACATCCTGGCACGTTCTCCATTGAGGGGCAACACCACCTCG ACGACGACGACCACCACCACCGGCGGACCGATCACGTCGACGTCGTCGAAGTCGCCGTCG TCACCGGTTCAAGCGGCGATCATCAACTACGTGCAGGCCTCACGTTCGCCGTCTCCGACG GCGTACCACAGCCTGAACGAGCGGTGGCCGAGCTCGCCGACGCCGGTTGTGGTTGTGCGG TCGAAGTCGCCGTCGCCGTCGTCGCCACCGATAGGTGGTCTGAGTCTGCAGACGACGACG GCGGCGGCGGCGAGAGGCGTCGGCGTGGTGGAAGGGGTGGATGCAGGTGCAACCACGTCG GCGTCGGCGTCGGCGCCAACGCAGGTGGTGGCGCTGTCAAGGGAAGGTGGTGGTTCGCGG TCCAAGTCGCCGTCGCCGGTGCCACATTAATAACGAGGCTGCAGAAGAGACGCCAGGATA AGGCTATAGCTTGACAGGCAATTTGATTCTTTCTTCCTTTTTTTTTTTTGTGTATGTCTC TTGTATAGCTTGTGGGCTTAGATTTGCTCCTTGATCACATTGTCTTGACACGAAGAATGT GTGTATTTTGATAGAACGGAAATGACAAAGTCCTGCCAAGCAGGGGTTCTCAACATTAAG GGCCCCTTTAAATC