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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os06t0530600-00
CDS Infomation

cds chromosome:IRGSP-1.0:6:19780992:19781426:1 gene:Os06g0530600 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:VQ motif-containing protein 22 description:VQ domain containing protein. (Os06t0530600-00)
Sequence

ATGGAGGTCCACGGCGCGGCGAGCAGGGAGCAGCAGCAGCACGACGGCGGCGGCGGCGGG
GTGAAGGTGAAGTTCATCGAGACGCAGTTCGTCAGCTCCGACGCGGCCAGCTTCAAGGCC
GTCGTGCAGCGGCTCACGGGCCAGTCCGCGCCCTCGCCTTCGGCGCCGGCGACCTCGGCG
AGGCCGAGCAGGCCGCGCGCGCGCGCCGCGGTCACGGCTTGCCCGGCGGCCGCCGTGGGG
TGGGCGGGCGGCTACGGCGGCGGCAGCGGCCTGATGACGATGGCCGCGCCGGTGAAGCAG
GAGGCGGCGGCGCCGCCTCCCAACCTTGAGGATCTCCACGAGCTCCGCGACTTCTCCGAC
CTGTTCTACCCGACCAGCGCCGGCGGCGGCGGGCGGCGCGTCGACGGCGGTGGCTACGGC
TACCCGTACTACTGA

Peptide Sequence

PEP ID

Os06t0530600-00
PEP Infomation

pep chromosome:IRGSP-1.0:6:19780992:19781426:1 gene:Os06g0530600 transcript:Os06t0530600-00 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:VQ motif-containing protein 22 description:VQ domain containing protein. (Os06t0530600-00)
Sequence

MEVHGAASREQQQHDGGGGGVKVKFIETQFVSSDAASFKAVVQRLTGQSAPSPSAPATSA
RPSRPRARAAVTACPAAAVGWAGGYGGGSGLMTMAAPVKQEAAAPPPNLEDLHELRDFSD
LFYPTSAGGGGRRVDGGGYGYPYY

Transcript Sequence

Transcript ID

Os06t0530600-00
Transcript Infomation

cdna chromosome:IRGSP-1.0:6:19780992:19781426:1 gene:Os06g0530600 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:VQ motif-containing protein 22 description:VQ domain containing protein. (Os06t0530600-00)
Sequence

ATGGAGGTCCACGGCGCGGCGAGCAGGGAGCAGCAGCAGCACGACGGCGGCGGCGGCGGG
GTGAAGGTGAAGTTCATCGAGACGCAGTTCGTCAGCTCCGACGCGGCCAGCTTCAAGGCC
GTCGTGCAGCGGCTCACGGGCCAGTCCGCGCCCTCGCCTTCGGCGCCGGCGACCTCGGCG
AGGCCGAGCAGGCCGCGCGCGCGCGCCGCGGTCACGGCTTGCCCGGCGGCCGCCGTGGGG
TGGGCGGGCGGCTACGGCGGCGGCAGCGGCCTGATGACGATGGCCGCGCCGGTGAAGCAG
GAGGCGGCGGCGCCGCCTCCCAACCTTGAGGATCTCCACGAGCTCCGCGACTTCTCCGAC
CTGTTCTACCCGACCAGCGCCGGCGGCGGCGGGCGGCGCGTCGACGGCGGTGGCTACGGC
TACCCGTACTACTGA