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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os06t0530300-01
CDS Infomation

cds chromosome:IRGSP-1.0:6:19737618:19740526:1 gene:Os06g0530300 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to uncharacterized BCR, COG1963 family protein. (Os06t0530300-01)
Sequence

GCTGTTGTGGCAGTGGCTACCTCGCTTGGGCTAGAAAGGGGCTTTGCAGACTCCATTTTT
GGTATGTCAGTGGTGTTCGCAGCAATCGTAATGTATGATGCTCAGGGAGTAAGAAGAGAG
GTGGGCAATCATGCAAGAGTTTTAAACAAGTTATTGACCCTTCGCGAGAAGATCACTCAA
AACCCGGACGACAATTCCTTGTTGAGTTCCACCTCTGAACTCCACTCCTCAAAGCCCGAG
ACGGTTGCCGAGCTCGTTTCCGTGGCTGAGAAGCTTGGTTCTTCACAAGGTTCATCCGCG
AACCCCTTCCCAATCCACAGTTCCGGGACCAAATCGTCGAGATTGAACGCCCTTCAGAGT
TCAGAAACAGAGGTAACTGAATTTACACAGCTGAAGGAGGCTTACACAGAGGAATGTGAC
CGGCTGAGCGAATCAGTCGGCCACACTGAGCTGCAGGTTGCAGCTGGTGCCCTGCTAGGC
TTCCTTGTGACCTTAGTCGTCTATGCCACACTGTAA

Peptide Sequence

PEP ID

Os06t0530300-01
PEP Infomation

pep chromosome:IRGSP-1.0:6:19737618:19740526:1 gene:Os06g0530300 transcript:Os06t0530300-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to uncharacterized BCR, COG1963 family protein. (Os06t0530300-01)
Sequence

AVVAVATSLGLERGFADSIFGMSVVFAAIVMYDAQGVRREVGNHARVLNKLLTLREKITQ
NPDDNSLLSSTSELHSSKPETVAELVSVAEKLGSSQGSSANPFPIHSSGTKSSRLNALQS
SETEVTEFTQLKEAYTEECDRLSESVGHTELQVAAGALLGFLVTLVVYATL

Transcript Sequence

Transcript ID

Os06t0530300-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:6:19737618:19740526:1 gene:Os06g0530300 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to uncharacterized BCR, COG1963 family protein. (Os06t0530300-01)
Sequence

GGCTGTTGTGGCAGTGGCTACCTCGCTTGGGCTAGAAAGGGGCTTTGCAGACTCCATTTT
TGGTATGTCAGTGGTGTTCGCAGCAATCGTAATGTATGATGCTCAGGGAGTAAGAAGAGA
GGTGGGCAATCATGCAAGAGTTTTAAACAAGTTATTGACCCTTCGCGAGAAGATCACTCA
AAACCCGGACGACAATTCCTTGTTGAGTTCCACCTCTGAACTCCACTCCTCAAAGCCCGA
GACGGTTGCCGAGCTCGTTTCCGTGGCTGAGAAGCTTGGTTCTTCACAAGGTTCATCCGC
GAACCCCTTCCCAATCCACAGTTCCGGGACCAAATCGTCGAGATTGAACGCCCTTCAGAG
TTCAGAAACAGAGGTAACTGAATTTACACAGCTGAAGGAGGCTTACACAGAGGAATGTGA
CCGGCTGAGCGAATCAGTCGGCCACACTGAGCTGCAGGTTGCAGCTGGTGCCCTGCTAGG
CTTCCTTGTGACCTTAGTCGTCTATGCCACACTGTAACACAACTATCATCTTCACATTCT
TCAGTTCATTATATAGATTGTTTACTCAACAATCAATATAATTACACGAGGAATTCACAG
TTAGCACCACAAAATTAGCTTGCTTTCTGCACTCATTTATTCAGTAAGAAATGTATGGGC
ATTTTATGGTTCTTGAGAAAGCACTTGAGCACATGTAGGTACTGAAATTTGACAGTAAAA
CCCCGGTAGTAAAATTATCCACAAAAATTACCCATG