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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os06t0530200-02
CDS Infomation

cds chromosome:IRGSP-1.0:6:19730691:19734991:1 gene:Os06g0530200 gene_biotype:protein_coding transcript_biotype:protein_coding description:Conserved hypothetical protein. (Os06t0530200-01);Conserved hypothetical protein. (Os06t0530200-02)
Sequence

ATGCCGCGGATTCCGCTGATCAAGTTCCCCAAGAGGAATCTCAAGATCCCATCCCCACCC
CCACCAGCGGCGCAACCTGCAGATCAGCACGCGTCCCTCTTGTCCCGATTGGGAGTTAAA
TCAGAGGCACCATCTTCTTCCGGGGAGATTAAAAATTACCGCTTTAGATCAGATGTGCCT
TCCCCACCTTCTTATACGGCTGTTGGAGGGCCAGCTTCACTCCTTCCTAAACGCAAGCCA
CTGTCAGAGGAAGAAATTGAGGCTATCATGCAAGGTGGTATCTACTGA

Peptide Sequence

PEP ID

Os06t0530200-02
PEP Infomation

pep chromosome:IRGSP-1.0:6:19730691:19734991:1 gene:Os06g0530200 transcript:Os06t0530200-02 gene_biotype:protein_coding transcript_biotype:protein_coding description:Conserved hypothetical protein. (Os06t0530200-01);Conserved hypothetical protein. (Os06t0530200-02)
Sequence

MPRIPLIKFPKRNLKIPSPPPPAAQPADQHASLLSRLGVKSEAPSSSGEIKNYRFRSDVP
SPPSYTAVGGPASLLPKRKPLSEEEIEAIMQGGIY

Transcript Sequence

Transcript ID

Os06t0530200-02
Transcript Infomation

cdna chromosome:IRGSP-1.0:6:19730691:19734991:1 gene:Os06g0530200 gene_biotype:protein_coding transcript_biotype:protein_coding description:Conserved hypothetical protein. (Os06t0530200-01);Conserved hypothetical protein. (Os06t0530200-02)
Sequence

CTCGATTCTCGACTTTTCTTGCTGTGGGGAGAAGAATCGCGATTGCGCGAGGGGATTTCT
TGCTGCTCGGAGATGCCGCGGATTCCGCTGATCAAGTTCCCCAAGAGGAATCTCAAGATC
CCATCCCCACCCCCACCAGCGGCGCAACCTGCAGATCAGCACGCGTCCCTCTTGTCCCGA
TTGGGAGTTAAATCAGAGGCACCATCTTCTTCCGGGGAGATTAAAAATTACCGCTTTAGA
TCAGATGTGCCTTCCCCACCTTCTTATACGGCTGTTGGAGGGCCAGCTTCACTCCTTCCT
AAACGCAAGCCACTGTCAGAGGAAGAAATTGAGGCTATCATGCAAGGTGGTATCTACTGA
TATTGCATCCGATGAATAAGATACCAAACCTTTTAAATGGGGTCACTAGAGCCATGTCGA
TATGGACCTTTTCGTTGTACTCCCTTTTTGGTGTCAGGAAGCAGCTGCCCTGATACTCCT
TTTTTTGAGTATTGCCAAAATGACCAATTCGTGAAAACTGAACATGCAATGCATCGGTTG
TTTGCCAAAATACATTGATCATGGAGTTATGCCATGCAACTCAACTAATTGTCTTATTCC