Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os06t0526600-01
CDS Infomation	cds chromosome:IRGSP-1.0:6:19516630:19524702:-1 gene:Os06g0526600 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:DEAD-box helicase ATP-binding protein description:DEAD-box helicase ATP-binding protein, Response to abiotic stress (salt, dehydration, ABA, blue and red light) (Os06t0526600-01)
Sequence	ATGCGGCGCCACCACCACCTCCTCGGCCTCCTCCGCCGCGCCACGGCCTCGCCGACGCCC GCCTCCCGCCGCGCGGGCCCACCACTCCCCGGCCTCCTCCAGGACCCGCTGCGGAATGGC GCCGCCGCCGCTGGCCCCCGCTTCTTCTCCTCGCGCGCCGGCCCCGGCGCCGGAGCTGCC GCGAAGAGCCTGATCGAGGACGAGGCCGAGCTCAGCGACTGGATCAGCGACCTCAAGACC GACTCGTTCCACCTCGGCCTCAGCAGCGGCGACGAAGGCGAGGCCTCCACGCGCGGGCCG GCTGCCTCGAGGGGAGGCCGGAGGGGGCGGGACTCGAGGGGCCCGCCGCCGAGGTCGAGA TTCGGTGGCGGTGATTTCGGCGGCGATAGGCGTGGGTTTGAGAGGAGGGGGAGGATGGTG AGTAATAATGAGCTGGGTGACGACGATGATGATGAGGATGAGGTCGGGTTTGGTTCCGCG AGGGGAAGGCGGGATCGGGGAGGGAGACAGTCAGAATTTTCACATAGAGGAAGGAGGGGA AATGATCGGGGAGGGAGACAGTCAGAATTTTCGTATGGAGGGAGGAGGGCAAACGATTTT GATGATGATGGTGGTGGGTTTCGGTCTACAAGGGGGCAGCGCGGCCGAGGTGGGAGGTTG GCAAATGTGTCGCGGAGGGGATATGATTTTGATGATGAGCCTGGGTTTCAATCTCCAAAG GGACAGCGCGGCCAGGGCGGGAGGTACAGTGATTTGGATGATGATGAAGGTGGGTTTGGG TCTCTGAGGGGAAGACGCGGTCGCGGTGGAAGGATGTCTGGTGTATCGCGGAGAGGTGGG AGGGGAAGTGATTTAGATGACAGTGAGGATGATGAATACTCAAGAGGTTCGTCTCCAAGG GGAAGACGTGGTCGTGGTGGAAGGATGTCTGGTGTGTCACGGAAAGGTGGGAGGGGAAGT GATTTAGATGACAGTGAGGATGATGAAAACGATTCTATTGACTCTAGAGGCAGAAGGCGC GACCATGGCACGAGAGGCAGGAATGTGGGAAGTTTGGGACCACAGAGAGGTGGGAGAGGG GGCGATGCAGATTTTAGCGATAGGCGGTCGAGGGGTGGTAAAATGTTTGATTTTGGCTTG TCAGAAGATGACAGTGAGCTGGGGGAAGTTGATGAGGATGATGGTCCATCAGGCTTCGAG GATGATCTCTTTGATGACGAGGGTGGTGAGAAGAATCTGGTGGAGAGTCCAGCTAAAAAT TCAGCTCCTTTTGAGTCAATTAAAGGAGAGCCAATTGATCAGGAGGGTGTTGTGCACACC AGAGAGAGTGGAGGTGGCGATTCGTATTTGAGCCAGACGAGTATTAAACTCTGGACATAT GGTGAAATAAGCAAAGATGCAATCGTCTTGATCCTAAGCTTGAATTGCAACTTTTCTAGC CCATACCATGTACTAACAAGCCTTATATATATAGGTAAGGATGTTCTTGCAAAAGCAAAA ACTGGGACTGGAAAAACTGTAGCATTCTTGCTTCCTGCCATTGAAGTTGTCTCCAAATTG CCCCCTATTGATTGTGATAAAAAAAGGCCTCCCATCAGTGTTGTTGTTGTGTGCCCTACA CGTGAGCTGGCTGATCAGGCTGCTGCAGAAGCTAACAAGCTCCTGAAATTTCATCCATCA ATTGGAGTGCAACTTGTAATAGGTGGCACTAGAATGGCTCTAGAGCAGAAGCGAATGCAT ACTAACCCTTGCCAGATTCTAGTAGCTACACCAGGAAGGCTTAAGGATCATATGGAGAAC ACTCCAGGGTTTGCTACTAGATTGATGGGTGTCAAAGTCCTTATTCTTGATGAAGCGGAT CGCTTATTAGATATGGGATTCCGGACTGATATCGAGAGAATAGTGGCTGCACTCCCAAAG CAGCGTCAAACACTTCTATTTTCTGCAACTGTTCCTGATGAGGTACGCCAAGTATGCCAC ATTGCCATGAAAAGAGATCTTGAATTTGTGAACACCGTTGAAGAAGGAAGTGAGGAAACA CACTCACAGGTGAAGCAAATGCATGTAGTTGCACCACTAGACAAACAGTTTTCTATCCTG TATGGTCTTCTAACTGATCATATTTCAGAAAATGTTGACTACAAGGTGATCGTGTTTTGT ACAACTGCAAAGGTAACAAGTCTTGTTGCTGAACTTCTGTCTGAATTGAAGTTGAATGTA CGCGAGATTCACTCCAGAAAGCCACAAAGTTACAGAACCAGAATATCCAAAGAATTTAAG GAATCAAAAGGTCTTATTCTTGTTAGCTCCGATGTATCTGCTAGGGGCGTTGATTATCCC AATGTCACACTAGTCGTCCAGATGGGAGTGCCTACTGACAGAGAACAATATATTCATCGA CTTGGTAGAACTGGCCGCAGAGGAAACGAGGGGAGTGGAATCTTATTATTGGCACCGTGG GAAGAATACTTCTTGAGAAGTATCAAAGATCTGCCTATTACAGAGGCAACATTACCTTTA ATTGATCTGGACACTAAAAGAAAGGTTGAAAAGGCTCTTGCACATGTGGAGGTTAAGGAT AAGGAACTTGCCTACCAAGCATGGCTCGGTTACTATAATTCTAACAAGTTCATTGGGCGT GACAAATACCAGCTTGTATCACTTGCCAATGAATTCAGCAGAAGTCTGGGCTTGAATAAC CCTCCTGCGGTGCCTAAGCTTGTCCTTAGAAAGATGGGACTGAACAATATCCCAGGTCTG CGATCAAAATAG

Peptide Sequence

PEP ID	Os06t0526600-01
PEP Infomation	pep chromosome:IRGSP-1.0:6:19516630:19524702:-1 gene:Os06g0526600 transcript:Os06t0526600-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:DEAD-box helicase ATP-binding protein description:DEAD-box helicase ATP-binding protein, Response to abiotic stress (salt, dehydration, ABA, blue and red light) (Os06t0526600-01)
Sequence	MRRHHHLLGLLRRATASPTPASRRAGPPLPGLLQDPLRNGAAAAGPRFFSSRAGPGAGAA AKSLIEDEAELSDWISDLKTDSFHLGLSSGDEGEASTRGPAASRGGRRGRDSRGPPPRSR FGGGDFGGDRRGFERRGRMVSNNELGDDDDDEDEVGFGSARGRRDRGGRQSEFSHRGRRG NDRGGRQSEFSYGGRRANDFDDDGGGFRSTRGQRGRGGRLANVSRRGYDFDDEPGFQSPK GQRGQGGRYSDLDDDEGGFGSLRGRRGRGGRMSGVSRRGGRGSDLDDSEDDEYSRGSSPR GRRGRGGRMSGVSRKGGRGSDLDDSEDDENDSIDSRGRRRDHGTRGRNVGSLGPQRGGRG GDADFSDRRSRGGKMFDFGLSEDDSELGEVDEDDGPSGFEDDLFDDEGGEKNLVESPAKN SAPFESIKGEPIDQEGVVHTRESGGGDSYLSQTSIKLWTYGEISKDAIVLILSLNCNFSS PYHVLTSLIYIGKDVLAKAKTGTGKTVAFLLPAIEVVSKLPPIDCDKKRPPISVVVVCPT RELADQAAAEANKLLKFHPSIGVQLVIGGTRMALEQKRMHTNPCQILVATPGRLKDHMEN TPGFATRLMGVKVLILDEADRLLDMGFRTDIERIVAALPKQRQTLLFSATVPDEVRQVCH IAMKRDLEFVNTVEEGSEETHSQVKQMHVVAPLDKQFSILYGLLTDHISENVDYKVIVFC TTAKVTSLVAELLSELKLNVREIHSRKPQSYRTRISKEFKESKGLILVSSDVSARGVDYP NVTLVVQMGVPTDREQYIHRLGRTGRRGNEGSGILLLAPWEEYFLRSIKDLPITEATLPL IDLDTKRKVEKALAHVEVKDKELAYQAWLGYYNSNKFIGRDKYQLVSLANEFSRSLGLNN PPAVPKLVLRKMGLNNIPGLRSK

Transcript Sequence

Transcript ID	Os06t0526600-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:6:19516630:19524702:-1 gene:Os06g0526600 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:DEAD-box helicase ATP-binding protein description:DEAD-box helicase ATP-binding protein, Response to abiotic stress (salt, dehydration, ABA, blue and red light) (Os06t0526600-01)
Sequence	ATGCGGCGCCACCACCACCTCCTCGGCCTCCTCCGCCGCGCCACGGCCTCGCCGACGCCC GCCTCCCGCCGCGCGGGCCCACCACTCCCCGGCCTCCTCCAGGACCCGCTGCGGAATGGC GCCGCCGCCGCTGGCCCCCGCTTCTTCTCCTCGCGCGCCGGCCCCGGCGCCGGAGCTGCC GCGAAGAGCCTGATCGAGGACGAGGCCGAGCTCAGCGACTGGATCAGCGACCTCAAGACC GACTCGTTCCACCTCGGCCTCAGCAGCGGCGACGAAGGCGAGGCCTCCACGCGCGGGCCG GCTGCCTCGAGGGGAGGCCGGAGGGGGCGGGACTCGAGGGGCCCGCCGCCGAGGTCGAGA TTCGGTGGCGGTGATTTCGGCGGCGATAGGCGTGGGTTTGAGAGGAGGGGGAGGATGGTG AGTAATAATGAGCTGGGTGACGACGATGATGATGAGGATGAGGTCGGGTTTGGTTCCGCG AGGGGAAGGCGGGATCGGGGAGGGAGACAGTCAGAATTTTCACATAGAGGAAGGAGGGGA AATGATCGGGGAGGGAGACAGTCAGAATTTTCGTATGGAGGGAGGAGGGCAAACGATTTT GATGATGATGGTGGTGGGTTTCGGTCTACAAGGGGGCAGCGCGGCCGAGGTGGGAGGTTG GCAAATGTGTCGCGGAGGGGATATGATTTTGATGATGAGCCTGGGTTTCAATCTCCAAAG GGACAGCGCGGCCAGGGCGGGAGGTACAGTGATTTGGATGATGATGAAGGTGGGTTTGGG TCTCTGAGGGGAAGACGCGGTCGCGGTGGAAGGATGTCTGGTGTATCGCGGAGAGGTGGG AGGGGAAGTGATTTAGATGACAGTGAGGATGATGAATACTCAAGAGGTTCGTCTCCAAGG GGAAGACGTGGTCGTGGTGGAAGGATGTCTGGTGTGTCACGGAAAGGTGGGAGGGGAAGT GATTTAGATGACAGTGAGGATGATGAAAACGATTCTATTGACTCTAGAGGCAGAAGGCGC GACCATGGCACGAGAGGCAGGAATGTGGGAAGTTTGGGACCACAGAGAGGTGGGAGAGGG GGCGATGCAGATTTTAGCGATAGGCGGTCGAGGGGTGGTAAAATGTTTGATTTTGGCTTG TCAGAAGATGACAGTGAGCTGGGGGAAGTTGATGAGGATGATGGTCCATCAGGCTTCGAG GATGATCTCTTTGATGACGAGGGTGGTGAGAAGAATCTGGTGGAGAGTCCAGCTAAAAAT TCAGCTCCTTTTGAGTCAATTAAAGGAGAGCCAATTGATCAGGAGGGTGTTGTGCACACC AGAGAGAGTGGAGGTGGCGATTCGTATTTGAGCCAGACGAGTATTAAACTCTGGACATAT GGTGAAATAAGCAAAGATGCAATCGTCTTGATCCTAAGCTTGAATTGCAACTTTTCTAGC CCATACCATGTACTAACAAGCCTTATATATATAGGTAAGGATGTTCTTGCAAAAGCAAAA ACTGGGACTGGAAAAACTGTAGCATTCTTGCTTCCTGCCATTGAAGTTGTCTCCAAATTG CCCCCTATTGATTGTGATAAAAAAAGGCCTCCCATCAGTGTTGTTGTTGTGTGCCCTACA CGTGAGCTGGCTGATCAGGCTGCTGCAGAAGCTAACAAGCTCCTGAAATTTCATCCATCA ATTGGAGTGCAACTTGTAATAGGTGGCACTAGAATGGCTCTAGAGCAGAAGCGAATGCAT ACTAACCCTTGCCAGATTCTAGTAGCTACACCAGGAAGGCTTAAGGATCATATGGAGAAC ACTCCAGGGTTTGCTACTAGATTGATGGGTGTCAAAGTCCTTATTCTTGATGAAGCGGAT CGCTTATTAGATATGGGATTCCGGACTGATATCGAGAGAATAGTGGCTGCACTCCCAAAG CAGCGTCAAACACTTCTATTTTCTGCAACTGTTCCTGATGAGGTACGCCAAGTATGCCAC ATTGCCATGAAAAGAGATCTTGAATTTGTGAACACCGTTGAAGAAGGAAGTGAGGAAACA CACTCACAGGTGAAGCAAATGCATGTAGTTGCACCACTAGACAAACAGTTTTCTATCCTG TATGGTCTTCTAACTGATCATATTTCAGAAAATGTTGACTACAAGGTGATCGTGTTTTGT ACAACTGCAAAGGTAACAAGTCTTGTTGCTGAACTTCTGTCTGAATTGAAGTTGAATGTA CGCGAGATTCACTCCAGAAAGCCACAAAGTTACAGAACCAGAATATCCAAAGAATTTAAG GAATCAAAAGGTCTTATTCTTGTTAGCTCCGATGTATCTGCTAGGGGCGTTGATTATCCC AATGTCACACTAGTCGTCCAGATGGGAGTGCCTACTGACAGAGAACAATATATTCATCGA CTTGGTAGAACTGGCCGCAGAGGAAACGAGGGGAGTGGAATCTTATTATTGGCACCGTGG GAAGAATACTTCTTGAGAAGTATCAAAGATCTGCCTATTACAGAGGCAACATTACCTTTA ATTGATCTGGACACTAAAAGAAAGGTTGAAAAGGCTCTTGCACATGTGGAGGTTAAGGAT AAGGAACTTGCCTACCAAGCATGGCTCGGTTACTATAATTCTAACAAGTTCATTGGGCGT GACAAATACCAGCTTGTATCACTTGCCAATGAATTCAGCAGAAGTCTGGGCTTGAATAAC CCTCCTGCGGTGCCTAAGCTTGTCCTTAGAAAGATGGGACTGAACAATATCCCAGGTCTG CGATCAAAATAGTCTTCCTCGAACCAAAGTTTTCTTGAATACACATACCACAATATTATC GTGCTTCACAGTGGTATGAGTTTTGGAGCAGTCTAGCTGGTAAACTAATAAACAGCTATG ATTAAAGGTCATAATGGGCTACTGGGAGCACAACTAAAGCTTCAGTCTCAATTTTTTTCT CCTGCAACATGGAAAATATGCCTTATGAAGGTGAATCTGTACACAAGCGATATGTAGTTT TGCATGCCCAGTACTGTGATGTTTAAAGCCTGACCATGCATGATCAGGCTGATGTAAACA TCTGAGTTGGTGGCACACGGAATTTTACTTTCTTTCCATTTTTGTGTGCCCGTGTATCTA TTGGATAGAAGCACAATACCCCTGTGCATGCGCTATCGTATTTATTGGACAATACCATTG TGCATCCGCTATCTGGAAGATTGTGCAAGAGCTCTGTTCTCCATTTGGCCTATAAATATG GTATTTGTGTAATGTTGATCACCAAATTGAACATATAATCTCTGTTAGTCTACCTTTTTT GACAGGATAGGGCTACGTAGCCTGTGAACAAATATTTGTTAGTTTTGTAGCATGCATTGG CTACGTGTCGTTTTTGTCTTTTTGTAGTGTATGCTACAACTCTTGGCACTTTATACAAGG TGAAGGTGAGAAGGCAAAACATGCAAGAGGCTCTCTCGATAC