Gene sequences

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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os06t0526100-01
CDS Infomation	cds chromosome:IRGSP-1.0:6:19490529:19494500:1 gene:Os06g0526100 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:basic helix-loop-helix protein 054 description:Hypothetical conserved gene. (Os06t0526100-01)
Sequence	ATGGGAGACGCGCTGTGTGATCAGCTCCTCTTGGTGGACAGCGACGGCGGCGAGTTCATC CCCCACCACGCCGACGCCGACGCCGACGACCTCTTCACCATCCTCGAGACGTGGGAGGGC TGCGCCAACGTCGTCGCCGGCGGCGCCCCCGCGACCACGACGACGTTAGGTAGTCCTATT GCCGCCGCTGCCTGCATCTCCGGCGTTGTTGGTGGGCAGAATCATCAGCAGCTGCCGGAA CCTGCCGCCGCGAAGACCGTGCCAGCCACCAATAACAAGCGGCGGGAGGAGGAGGTGGCG GACCGTGACGGCGACGGAGACGACGACGACGGTTCGCCGCAGAAGAGGCGCAAGTGCTGC TCGCCGGAGTCTTCGACGACGGACGTGGCGGCGGCGACGACGCCCAAGACGGCGCACATC GCCGTGGAGCGCAACCGGAGGAAGCAGATGAACGAGAACCTCGCCGTGCTTCGCTCCCTC ATGCCATGCTTCTACGTCAAGCGGGGAGACCAGGCATCCATCATAGGAGGAGTGGTGGAC TACATCAAGGAGCTGCAGCAAGTATTGCACTCGCTGGAGGCCAAGAAGCAGCGCAAGGTC TACACCGACCAGGTGCTCAGCCCACGGCCGCCGGCGACGGTGGCGGCGTCGTGCTGCAGC CCGCGCCCACCGCAGCTCAGCCCCAGGCTGCCGCCGCAGCTGCTCAAGTCCACGCCGCCG CTCAGCCCGCGGCTCGCCGTGCCGATCAGCCCCAGGACGCCGCCGACGCCCGGTAGTCCC TACAGGCTCCTCCGGCTGCCGCCGCCGCCGCCCCCGGCGTCCGGCTCCAACTACGCGTCC CCGGCGATGACGCCGACCCACCACGAGACGGCGGCGCCGTCGCTGGACGCCATCGCCGCC GAGCTGTCGGCGTACGCCAGCAGGCAGGCGCTGGGCGGCGGCCTCCTCCTCCCCGACGTG AAGGTGGAGTTCGCCGGCGCGAACCTGGTGCTGAAGACGGTGTCGCAGCGGTCGCCGGGG CAGGCGGTGAAGATCATCGCCGCCCTGGAGGGCCGATCGCTGGAGATTCTTCACGCCAAG ATCAGCACCGTCGATGACACCGCCGTCAACTCCTTCACTGTCAAGGTGTGTACTGCTAGT CTGCTACTGCATGGCACAGCTATTTCAGCTCTTGCGCTCATTATGTGA

Peptide Sequence

PEP ID	Os06t0526100-01
PEP Infomation	pep chromosome:IRGSP-1.0:6:19490529:19494500:1 gene:Os06g0526100 transcript:Os06t0526100-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:basic helix-loop-helix protein 054 description:Hypothetical conserved gene. (Os06t0526100-01)
Sequence	MGDALCDQLLLVDSDGGEFIPHHADADADDLFTILETWEGCANVVAGGAPATTTTLGSPI AAAACISGVVGGQNHQQLPEPAAAKTVPATNNKRREEEVADRDGDGDDDDGSPQKRRKCC SPESSTTDVAAATTPKTAHIAVERNRRKQMNENLAVLRSLMPCFYVKRGDQASIIGGVVD YIKELQQVLHSLEAKKQRKVYTDQVLSPRPPATVAASCCSPRPPQLSPRLPPQLLKSTPP LSPRLAVPISPRTPPTPGSPYRLLRLPPPPPPASGSNYASPAMTPTHHETAAPSLDAIAA ELSAYASRQALGGGLLLPDVKVEFAGANLVLKTVSQRSPGQAVKIIAALEGRSLEILHAK ISTVDDTAVNSFTVKVCTASLLLHGTAISALALIM

Transcript Sequence

Transcript ID	Os06t0526100-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:6:19490529:19494500:1 gene:Os06g0526100 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:basic helix-loop-helix protein 054 description:Hypothetical conserved gene. (Os06t0526100-01)
Sequence	ACATACCACCCTGCGCTTGTCATCAAACAACGGTCGACCTCAAACCACCATCAGATCGAT CGAGCTTGAAACAAATTAAGCCACCAAAAGCAACATTCCCTTGGTGACCGTAGCTAGACT CATCCATCATCCATGGGAGACGCGCTGTGTGATCAGCTCCTCTTGGTGGACAGCGACGGC GGCGAGTTCATCCCCCACCACGCCGACGCCGACGCCGACGACCTCTTCACCATCCTCGAG ACGTGGGAGGGCTGCGCCAACGTCGTCGCCGGCGGCGCCCCCGCGACCACGACGACGTTA GGTAGTCCTATTGCCGCCGCTGCCTGCATCTCCGGCGTTGTTGGTGGGCAGAATCATCAG CAGCTGCCGGAACCTGCCGCCGCGAAGACCGTGCCAGCCACCAATAACAAGCGGCGGGAG GAGGAGGTGGCGGACCGTGACGGCGACGGAGACGACGACGACGGTTCGCCGCAGAAGAGG CGCAAGTGCTGCTCGCCGGAGTCTTCGACGACGGACGTGGCGGCGGCGACGACGCCCAAG ACGGCGCACATCGCCGTGGAGCGCAACCGGAGGAAGCAGATGAACGAGAACCTCGCCGTG CTTCGCTCCCTCATGCCATGCTTCTACGTCAAGCGGGGAGACCAGGCATCCATCATAGGA GGAGTGGTGGACTACATCAAGGAGCTGCAGCAAGTATTGCACTCGCTGGAGGCCAAGAAG CAGCGCAAGGTCTACACCGACCAGGTGCTCAGCCCACGGCCGCCGGCGACGGTGGCGGCG TCGTGCTGCAGCCCGCGCCCACCGCAGCTCAGCCCCAGGCTGCCGCCGCAGCTGCTCAAG TCCACGCCGCCGCTCAGCCCGCGGCTCGCCGTGCCGATCAGCCCCAGGACGCCGCCGACG CCCGGTAGTCCCTACAGGCTCCTCCGGCTGCCGCCGCCGCCGCCCCCGGCGTCCGGCTCC AACTACGCGTCCCCGGCGATGACGCCGACCCACCACGAGACGGCGGCGCCGTCGCTGGAC GCCATCGCCGCCGAGCTGTCGGCGTACGCCAGCAGGCAGGCGCTGGGCGGCGGCCTCCTC CTCCCCGACGTGAAGGTGGAGTTCGCCGGCGCGAACCTGGTGCTGAAGACGGTGTCGCAG CGGTCGCCGGGGCAGGCGGTGAAGATCATCGCCGCCCTGGAGGGCCGATCGCTGGAGATT CTTCACGCCAAGATCAGCACCGTCGATGACACCGCCGTCAACTCCTTCACTGTCAAGGTG TGTACTGCTAGTCTGCTACTGCATGGCACAGCTATTTCAGCTCTTGCGCTCATTATGTGA TTATTATTACCCCCTTCATTTTTAAATGATTGACACCGGATACGTGCACTATTTATTTTT AAAATTTTGAAAAATTGTCTTCTTTGCAAAATATTTACAAACACTATAAGGGTTATTAAG TGTGAAACTTTTGATCACTTTAATCTAACAATTTAAGAGTAATTAGTGGTCAAAGTTCTA ATAGTACACTGAAAGTTGCTAGATTTTTTAAAATGGAGAGAGTATGTGTCCTAATCACAA TTATTTAAAAAAATTAAAACTGAATTAATGTTTAACAAATTTTTCTCATAATTAGTATTT TTTTTAAATAAAGGTACGAGCTCTGCATTTCATTTAGAAAAGAAAATCAAAAGTCGCAAG TGTAATCGTTGCAACATTTTCAGCTCTACCATTTATAATTAACAGAAGCCTTCATATAAT TAACCATATTATTGTCACTAAGATTGTTGATATGTACACATGAACAAAAGATCTCATAGA TGAGTGCACTGCTTGAGGCCGTGTGGAGGACACAGTAAATGTGAATGGAACATTTGAAAG GAAACTGTTTAGGGTACAGTGCCGTATCAAAAGAAATGCATTTGTTTCATGTGAGTTTCC CATGAAGTGCATGTATGGCTAGCTTAACAGCTAGTACTGCCCAAGCATGTTGAAGCAATG AAGCTGCACTGCTCATAAATGTGGTAGGGTATACAAATGTCTATGTTCTGCCCGGACATC TGTATGGTAGTATAGTATATATATCAGAGACCAGACAGTGTACTGGTACTTCACTGCATG CCTTCACTGTTACATGGTGGTATATCTGCATTTTCACAGTTCTTCAGGATGGGTGCCAAT TGGTAACATACATTAATTCATGGTATAATATATTGGTACACTTGTATTGGAAACAAATTT AATACTAAAATTTGTGGCATCTTCGAGTATCTAGGAGTGAAAGTTTATCATGACATTGAC AAATCTTACACGTAACATTTTTTATCCTACGGTAGTTTTCAGGTTTCCGCTGCATATTTC TCCTATATATTTTTCCTATATAGGCATTCTTACAAAAATTCCTCGGGTTTCTTCGCTTCC ATCCTATTTAATTAGATTATACTGGGCTGAATTTTAGTTTATTTTCATAAATAGGGCCAT AACATCATGCATCAATTAAATATGACCTATGTAAATCATGTAAACATATATATGTCAGTT TCCATTTAGTGCAGTGTTGTCACGCTTTCACGTCATCTTATTTAGTTTTTGGACCATTAG ATTGTAATTGTTTTGCTCTTGGGTTGATGCATGAAAGCACTTCCTTTCTGTGAAGAAACT ATATATGGAATGCTATGTGATAAGTTTTAGTTTATAAGATGAAATTAACATTCCTATGAT TTAATATTTTGGTAAATTATAAAATCTTCACTGTGCTTACATTTTTCTAGTATATCTTTG GGCAGATTGGAATTGAGTGCGAGCTCAGCGCTGAAGAGTTGGTACAGGTGATTCAGCAAA CGTTCACATGACTCACGCATGTTTCGACCGACCAACTGTTGAAGCTGAAATTAATTAAGT ATAGCATGCAGCAGAAACAGAGCGAACAGCCAAGGGAGCACTAGAGTCGACAATACGTGT TGGGCTCTCTGTGTACGAGTGTGTCTGCATTTGCGAGATGAAATTCAATTTAGTTTCAAT TCAGATTTGCCTCTAGTGCTCATCATGCACGTGCTAATTTTGCATTTATTTTTGTCTTTT TGTTAATTCTCGTGCAAATTGATTTTTCTACATATATAGGACTATCGGATTCAATATTAT GTC