Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os06t0524300-01
CDS Infomation	cds chromosome:IRGSP-1.0:6:19401016:19406760:1 gene:Os06g0524300 gene_biotype:protein_coding transcript_biotype:protein_coding description:Protein of unknown function DUF3133 domain containing protein. (Os06t0524300-01)
Sequence	ATGGAAGGGGACGAGGGCGCGGCGGCGGCGGCGAGGATAAGGCTAGTGCGGTGCCCCAAG TGCGACAAGTTCTTGCCGGAGCTCCCCGCCTACTCCGTCTACGTCTGCGGCGGCTGCGGC GCCGCTCTCCAAGCAAAGAAGAAGTACTCAGCCCAAGGTTCTGATAACTCTGATAATGGA CATGTGAAGTACCTTGAGGTACTAGAGAGTGTTGCGGAGGCGCCTGAAGCAATGGATGGT GCTACCGCTGATGGTAGATCTATACCCAATAGAATTTCAGCTTTGCACAGTAGATCAGTT TACAACCATGAAGACAATCGAATGGCAAGAGGTCCAAGTACTTCAACAGGTGAAGCTACT ATTAGAAACGATGGTAGGGAGGCAAAGTACATGCGCATCCGTAATGTGGAAAATGCTGAC ATGATGAAATCAGTAAGAGGAAGAGGTATATCTGACATATCTCCGAGGTCTCCAATCGAT GGAATTCCACCCACCTCTTACCAAGCGGAAAGCCTTGTCAACTACCAATTACAGTCAAAA TACAGATTCTCCAACAGGGAGCATGCCAATGATAGGGACTTGGATGGTCCAAGCAGAGTT AGGGGCCTTGAGAAAGATCGTGCTGAGCTCTTGAAGATGCTTGATGAGTTGAGAGACCAG GTGCAGCAATCATGTGAGGTTACTGATGCACCAAGTAGAAGTGCTACAACTAATAGACCT GCAGATGCCTCAAGTTCACATGGTGCGCATGATCAGCCAAATCAGCTGAGGCATGATCCA TCTGTATTGCATTGGAATGGTTCTCATCACTCGCCATCCTTGAATGTGCAAAGTCCTAAT ATCCCACAAGTCCATGCTCCATTGCCTACTCGACAGAATCTTCATGGATATGCAGAGCCC ATCCCGCATGCGAGAGCCTCTAGCTATCATGCTGGTGCTGGTTACCCCTGCAGAAATGTT GATAATTTCTTCTTTGGACATCATGATCCTGACCCTTTGCTCTCATGTCACCATGAAGGC TTGTACCATCAGCCCGTCTGTTCTTGCTTCAATTGTTACCACCGAGAGTTTTTGCCTGTA CAGGGAACTCCCCTTGGTTTTACTGATCAAAGGGCACCATACCTTATGAACAGTTATGGA GCATATCCTGTAGAGGGTCCCCTATATGGTCAGCAGAGATACACTTCAAGAGGTACTAAT ACTTCTTTACAGAGGAATCACCTGAGGACCAATGTAAGGAAGAAACCGGCACAAACTTGT GAGCCGATTGCAGGTGGTGCCCCTTTCACCATATGCTACAATTGCTATGAAGTGCTGCGA ATACCAATGAAACATTCTTTGTTGGGAAAGGAGTATAAGCTGATGTGTGGATCATGCTCA CATGCAATTCTAGTCAACCTTGATGGAAGCAGGCTCAATGTTTCAGAACCTGCGCCCGGT ATAAATTTATCTGCTGCACTGCAAAATGGTATTGGTGATAGCATGAGAAACAATGGGCAT GCTAATGCTGATGAGAGGTTGCTTCCACAATATTGTTTTTCTAATGGAAGTCATGAATCT CAAGAAAAAGATCTAGAATCAAATTCAAGTGAATCAGATAGCAAACACACTCCTCTAGGG ACTGATTCTGAAAATACTCCCCAGTCCAGGGATCTTCCTTCTGAAGCCAATGTAATTTCC CATGTACCAAGTTTACCGCATCATGATCGTTGTGGATTCTCACCATCGGAAGATTCTGGA AAGGGAAGTAGAAGTACCCATTCTGAACATGAAAAGGCTATCCTATTTACTGAAAGTTGC AAACGGAACTCAATTAAAGATGTATGTGTAGCCAATGAGACACAGTCTCCAGTCGATGAG TTTGATGATACTTTATATGCACAAGATATGCTAAATTTGCCACAAAATGTTGGCCATACT AGGTCTACAAAGGCAGGCGATTCATTTCTAACCAATCTCATTAAAAGGAGCTTCAAAATG AACAATGGAACACGCAATGGAAGAGCAAGGATTTTTGTTAATGGCTTTCCTATCTCTGAC CGTGCAGTCAGGAAGGCTGAGAAGCTAGCTGGAGAAATCTGTCCTGGTGATTACTGGTAT GATTATCGTGCTGGGTTCTGGGGTGTTATGGGGCGACCCTGCCTTGGCATGATACCTCCT TATATTCCAGAGTTCAATTATCCTATGCCCAAGAACTGTGGTGGTGGAAACACCGGCATA TTTATTAATGGGAGAGAACTTCATCAGAAGGATTTGGATCTACTTGTGTCTCGAGGACTG TCTGATTCCCCTGGCAGATCTTATATAGTTGAAAATTCTGGGAAAGTTTCAGATGAAGTT TCTGGTGAAGAGCTTTATGGCCTTGGCAAGCTTGCACCGACTGTGGAGAAAATGAGGCGC GGATTTGGCATGCGAGTCCCAAGAATCATCCAGTGA

Peptide Sequence

PEP ID	Os06t0524300-01
PEP Infomation	pep chromosome:IRGSP-1.0:6:19401016:19406760:1 gene:Os06g0524300 transcript:Os06t0524300-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Protein of unknown function DUF3133 domain containing protein. (Os06t0524300-01)
Sequence	MEGDEGAAAAARIRLVRCPKCDKFLPELPAYSVYVCGGCGAALQAKKKYSAQGSDNSDNG HVKYLEVLESVAEAPEAMDGATADGRSIPNRISALHSRSVYNHEDNRMARGPSTSTGEAT IRNDGREAKYMRIRNVENADMMKSVRGRGISDISPRSPIDGIPPTSYQAESLVNYQLQSK YRFSNREHANDRDLDGPSRVRGLEKDRAELLKMLDELRDQVQQSCEVTDAPSRSATTNRP ADASSSHGAHDQPNQLRHDPSVLHWNGSHHSPSLNVQSPNIPQVHAPLPTRQNLHGYAEP IPHARASSYHAGAGYPCRNVDNFFFGHHDPDPLLSCHHEGLYHQPVCSCFNCYHREFLPV QGTPLGFTDQRAPYLMNSYGAYPVEGPLYGQQRYTSRGTNTSLQRNHLRTNVRKKPAQTC EPIAGGAPFTICYNCYEVLRIPMKHSLLGKEYKLMCGSCSHAILVNLDGSRLNVSEPAPG INLSAALQNGIGDSMRNNGHANADERLLPQYCFSNGSHESQEKDLESNSSESDSKHTPLG TDSENTPQSRDLPSEANVISHVPSLPHHDRCGFSPSEDSGKGSRSTHSEHEKAILFTESC KRNSIKDVCVANETQSPVDEFDDTLYAQDMLNLPQNVGHTRSTKAGDSFLTNLIKRSFKM NNGTRNGRARIFVNGFPISDRAVRKAEKLAGEICPGDYWYDYRAGFWGVMGRPCLGMIPP YIPEFNYPMPKNCGGGNTGIFINGRELHQKDLDLLVSRGLSDSPGRSYIVENSGKVSDEV SGEELYGLGKLAPTVEKMRRGFGMRVPRIIQ

Transcript Sequence

Transcript ID	Os06t0524300-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:6:19401016:19406760:1 gene:Os06g0524300 gene_biotype:protein_coding transcript_biotype:protein_coding description:Protein of unknown function DUF3133 domain containing protein. (Os06t0524300-01)
Sequence	GTTTTCTTCTCCTCGACCCGCCAAACAGCAGCCCGCTCTTTTGATCTTTTCCTCCCTCTC TTCTTCTCCCTCCGAACCACGAGTCGCCGCCAATGGCCTCCTGACAAGGCCTCGTCTCGG TTCTCTGCTCGTGGTTGGGGGCTTCTTGGCGTTCTTGATTTTTTGGTTTGGGTGCCTTGG TGCTCGTTCTTGAGGCGTTCGTTTTCCCTTGGTTTGATGCGGCGGCGGTGGTGAGGGTGG GAGCAGCCGCAGGTCGGGAATGGAAGGGGACGAGGGCGCGGCGGCGGCGGCGAGGATAAG GCTAGTGCGGTGCCCCAAGTGCGACAAGTTCTTGCCGGAGCTCCCCGCCTACTCCGTCTA CGTCTGCGGCGGCTGCGGCGCCGCTCTCCAAGCAAAGAAGAAGTACTCAGCCCAAGGTTC TGATAACTCTGATAATGGACATGTGAAGTACCTTGAGGTACTAGAGAGTGTTGCGGAGGC GCCTGAAGCAATGGATGGTGCTACCGCTGATGGTAGATCTATACCCAATAGAATTTCAGC TTTGCACAGTAGATCAGTTTACAACCATGAAGACAATCGAATGGCAAGAGGTCCAAGTAC TTCAACAGGTGAAGCTACTATTAGAAACGATGGTAGGGAGGCAAAGTACATGCGCATCCG TAATGTGGAAAATGCTGACATGATGAAATCAGTAAGAGGAAGAGGTATATCTGACATATC TCCGAGGTCTCCAATCGATGGAATTCCACCCACCTCTTACCAAGCGGAAAGCCTTGTCAA CTACCAATTACAGTCAAAATACAGATTCTCCAACAGGGAGCATGCCAATGATAGGGACTT GGATGGTCCAAGCAGAGTTAGGGGCCTTGAGAAAGATCGTGCTGAGCTCTTGAAGATGCT TGATGAGTTGAGAGACCAGGTGCAGCAATCATGTGAGGTTACTGATGCACCAAGTAGAAG TGCTACAACTAATAGACCTGCAGATGCCTCAAGTTCACATGGTGCGCATGATCAGCCAAA TCAGCTGAGGCATGATCCATCTGTATTGCATTGGAATGGTTCTCATCACTCGCCATCCTT GAATGTGCAAAGTCCTAATATCCCACAAGTCCATGCTCCATTGCCTACTCGACAGAATCT TCATGGATATGCAGAGCCCATCCCGCATGCGAGAGCCTCTAGCTATCATGCTGGTGCTGG TTACCCCTGCAGAAATGTTGATAATTTCTTCTTTGGACATCATGATCCTGACCCTTTGCT CTCATGTCACCATGAAGGCTTGTACCATCAGCCCGTCTGTTCTTGCTTCAATTGTTACCA CCGAGAGTTTTTGCCTGTACAGGGAACTCCCCTTGGTTTTACTGATCAAAGGGCACCATA CCTTATGAACAGTTATGGAGCATATCCTGTAGAGGGTCCCCTATATGGTCAGCAGAGATA CACTTCAAGAGGTACTAATACTTCTTTACAGAGGAATCACCTGAGGACCAATGTAAGGAA GAAACCGGCACAAACTTGTGAGCCGATTGCAGGTGGTGCCCCTTTCACCATATGCTACAA TTGCTATGAAGTGCTGCGAATACCAATGAAACATTCTTTGTTGGGAAAGGAGTATAAGCT GATGTGTGGATCATGCTCACATGCAATTCTAGTCAACCTTGATGGAAGCAGGCTCAATGT TTCAGAACCTGCGCCCGGTATAAATTTATCTGCTGCACTGCAAAATGGTATTGGTGATAG CATGAGAAACAATGGGCATGCTAATGCTGATGAGAGGTTGCTTCCACAATATTGTTTTTC TAATGGAAGTCATGAATCTCAAGAAAAAGATCTAGAATCAAATTCAAGTGAATCAGATAG CAAACACACTCCTCTAGGGACTGATTCTGAAAATACTCCCCAGTCCAGGGATCTTCCTTC TGAAGCCAATGTAATTTCCCATGTACCAAGTTTACCGCATCATGATCGTTGTGGATTCTC ACCATCGGAAGATTCTGGAAAGGGAAGTAGAAGTACCCATTCTGAACATGAAAAGGCTAT CCTATTTACTGAAAGTTGCAAACGGAACTCAATTAAAGATGTATGTGTAGCCAATGAGAC ACAGTCTCCAGTCGATGAGTTTGATGATACTTTATATGCACAAGATATGCTAAATTTGCC ACAAAATGTTGGCCATACTAGGTCTACAAAGGCAGGCGATTCATTTCTAACCAATCTCAT TAAAAGGAGCTTCAAAATGAACAATGGAACACGCAATGGAAGAGCAAGGATTTTTGTTAA TGGCTTTCCTATCTCTGACCGTGCAGTCAGGAAGGCTGAGAAGCTAGCTGGAGAAATCTG TCCTGGTGATTACTGGTATGATTATCGTGCTGGGTTCTGGGGTGTTATGGGGCGACCCTG CCTTGGCATGATACCTCCTTATATTCCAGAGTTCAATTATCCTATGCCCAAGAACTGTGG TGGTGGAAACACCGGCATATTTATTAATGGGAGAGAACTTCATCAGAAGGATTTGGATCT ACTTGTGTCTCGAGGACTGTCTGATTCCCCTGGCAGATCTTATATAGTTGAAAATTCTGG GAAAGTTTCAGATGAAGTTTCTGGTGAAGAGCTTTATGGCCTTGGCAAGCTTGCACCGAC TGTGGAGAAAATGAGGCGCGGATTTGGCATGCGAGTCCCAAGAATCATCCAGTGACAAAC TGACGGGTCAATACAATACATTCACAAGCTCTGGAGATGCTAAGGGACAAGCCAATGCCA TAGCTCATAGCTGCAGCTCACACAAGTCACAACAGGGTGACTTGAGTTTTCCAAGAATAC TGTTTCTAGTTTAGCTCGTGAATCTAGTTATCGTCCTCCTTTCTTGTTGCCTGATTGTGC TGCCCCTTCAGATGTCATATGGAGGCATTCTTGTAGTTTTCTAGTGTATTTGTGATTTCT TTTCGACCTGGTACAATGATTTTAGGGGGGGGGGGGGGAGGAGGGAGGTAGTCAATTGAA TTTGTTTGGTTTGCATTCTAACATGTATTATGCACCTTCGAAGAATGATGTTGAAATGCA TGACAAAACGCATCAAAATGAGCTCAATTAGAAGGTACAGGAAGGAGTTGCTGGGGATGG TTTGAACT