Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os06t0522300-01
CDS Infomation

cds chromosome:IRGSP-1.0:6:19271256:19272675:-1 gene:Os06g0522300 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:class III peroxidase 81 description:Haem peroxidase family protein. (Os06t0522300-01)
Sequence

ATGTCGTTTAGGTGTAAGGGCGGCGTCGCTTGGGTTGCTCTGCTCGTCGCTGTCGCGGCT
CTCGCCTCCGCCGCTCAGGGATTTCCAAATCCCTTCGGTCACGAGGAGTTCACGGAGAGT
TACTACGACGAGACGTGCCCCAACGCGCAGAGCATCGTGCGCTCGGTCATGGAGCGCCAC
GCCGCCGCCAACCCCCGCACGGCGCCGGCCATCCTCCGCCTCTTCTTCCACGACTGCTTT
GTCAACGGTTGTGATGCCTCCATCCTTCTGAACGCTACGGACTCCATGGAGAGCGAGAAG
GATGCCGAGCCCAACGCCACCCTCGCCGGCTTCGACGTGATCGACGGCATCAAGTCCGAG
CTCGAGCGCAGCTGCCCGGCCACCGTCTCCTGCGCCGATGTTCTCGCGCTCGCCGCCCGC
GACGCCGTCGCCATGCTCGGTGGGCCCAGCTGGGGCGTGCTCCTCGGCCGCAAGGACTCC
CTCACCGCCAGCATAGACATGGCCAAAGAGGATCTCCCGAACCCGAAAGACAGCCTGGCC
GAACTCATCAGGATGTTCAAGGAGCACGACCTCGACGAGCGTGACCTCACCGCGCTCTCC
GGTGCACACACCGTCGGCATGGCACATGACTGCAAGAACTACGACGACCGCATCTACAGT
CGCGTCGGCCAGGGCGGCGACAGCATCGACCCATCCTTCGCGGCGCTGCGCAGGCAGGAG
TGCGAGCAGAAGCACGACAAGGCCACGGCACCGTTCGACGAGCGGACGCCAGCCAAGTTT
GACAACGCCTACTACGTCGACCTGCTCGCGAGGCGGGGGCTCCTCACCTCTGACCAGGAG
CTCTACACCCAGGGCTGCCAGACCGGCGACCTGGTGAAGACGTACGCCATGAACGGCGAC
GTGTTCTTCGCCGACTTCACAAGAGCGATGGTGAAGATGGGGAACATACGCCCAAAGCAT
TGGTGGACTCCGGCGGAGGTCAGGCTCAAGTGCTCGGTGGCCAACACACATTATTGA

Peptide Sequence

PEP ID

Os06t0522300-01
PEP Infomation

pep chromosome:IRGSP-1.0:6:19271256:19272675:-1 gene:Os06g0522300 transcript:Os06t0522300-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:class III peroxidase 81 description:Haem peroxidase family protein. (Os06t0522300-01)
Sequence

MSFRCKGGVAWVALLVAVAALASAAQGFPNPFGHEEFTESYYDETCPNAQSIVRSVMERH
AAANPRTAPAILRLFFHDCFVNGCDASILLNATDSMESEKDAEPNATLAGFDVIDGIKSE
LERSCPATVSCADVLALAARDAVAMLGGPSWGVLLGRKDSLTASIDMAKEDLPNPKDSLA
ELIRMFKEHDLDERDLTALSGAHTVGMAHDCKNYDDRIYSRVGQGGDSIDPSFAALRRQE
CEQKHDKATAPFDERTPAKFDNAYYVDLLARRGLLTSDQELYTQGCQTGDLVKTYAMNGD
VFFADFTRAMVKMGNIRPKHWWTPAEVRLKCSVANTHY

Transcript Sequence

Transcript ID

Os06t0522300-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:6:19271256:19272675:-1 gene:Os06g0522300 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:class III peroxidase 81 description:Haem peroxidase family protein. (Os06t0522300-01)
Sequence

CTCATCATCCACCACAACATCTCCTCCAATCAGCAGCAGCAGCAGCAGAGCTGATCACCA
TCACTTCGGAGCTTGTCAGCACAAGGCTAATTATTAAGCTAGGGCTCGATCGATCTGATC
GTGATCTGATCTGATCTGACCATCAGCAGCCATGTCGTTTAGGTGTAAGGGCGGCGTCGC
TTGGGTTGCTCTGCTCGTCGCTGTCGCGGCTCTCGCCTCCGCCGCTCAGGGATTTCCAAA
TCCCTTCGGTCACGAGGAGTTCACGGAGAGTTACTACGACGAGACGTGCCCCAACGCGCA
GAGCATCGTGCGCTCGGTCATGGAGCGCCACGCCGCCGCCAACCCCCGCACGGCGCCGGC
CATCCTCCGCCTCTTCTTCCACGACTGCTTTGTCAACGGTTGTGATGCCTCCATCCTTCT
GAACGCTACGGACTCCATGGAGAGCGAGAAGGATGCCGAGCCCAACGCCACCCTCGCCGG
CTTCGACGTGATCGACGGCATCAAGTCCGAGCTCGAGCGCAGCTGCCCGGCCACCGTCTC
CTGCGCCGATGTTCTCGCGCTCGCCGCCCGCGACGCCGTCGCCATGCTCGGTGGGCCCAG
CTGGGGCGTGCTCCTCGGCCGCAAGGACTCCCTCACCGCCAGCATAGACATGGCCAAAGA
GGATCTCCCGAACCCGAAAGACAGCCTGGCCGAACTCATCAGGATGTTCAAGGAGCACGA
CCTCGACGAGCGTGACCTCACCGCGCTCTCCGGTGCACACACCGTCGGCATGGCACATGA
CTGCAAGAACTACGACGACCGCATCTACAGTCGCGTCGGCCAGGGCGGCGACAGCATCGA
CCCATCCTTCGCGGCGCTGCGCAGGCAGGAGTGCGAGCAGAAGCACGACAAGGCCACGGC
ACCGTTCGACGAGCGGACGCCAGCCAAGTTTGACAACGCCTACTACGTCGACCTGCTCGC
GAGGCGGGGGCTCCTCACCTCTGACCAGGAGCTCTACACCCAGGGCTGCCAGACCGGCGA
CCTGGTGAAGACGTACGCCATGAACGGCGACGTGTTCTTCGCCGACTTCACAAGAGCGAT
GGTGAAGATGGGGAACATACGCCCAAAGCATTGGTGGACTCCGGCGGAGGTCAGGCTCAA
GTGCTCGGTGGCCAACACACATTATTGATGCTCATACTGTTGAGTACAACACAATTATGT
TGCACTCATTTATAAGTGTGATATTTCCTTTCGATTTAATTGTGCATTAAACTGTAAGAT
GTATTTTTCTTTTGTACCTCAATTTTTTTATTCATTTTTTTATAATGTATGGGAGATCAC
TTTGCCTTG