Plant GARDEN
How To ▶︎

JA

EN

TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

Search

By Species By Keywords Genes By Markers By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only) Sequences Other Tools

Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os06t0521300-00
CDS Infomation

cds chromosome:IRGSP-1.0:6:19195774:19196540:-1 gene:Os06g0521300 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Harpin-induced protein 1 containing protein, expressed. (Os06t0521300-00)
Sequence

ATGGCCACTGCCTGCACGACCACCGACGGCAGTGGCGACGTCTGTCTCCGTCCTTCCGCC
TCCGACGGCCTCCCCACACACCAGGCGTGCACCTCCAAGGCCGCCCCAGACGGCGAGACA
CGCCGGCGTCAGCATCAGCGGCGGCGGTGCTGCGTCGTCTGCCTCGTCGTGACAATCGCC
ACGCTGGCGCTCCTCGGCGTCGCCGTCCTCGTCCTCTCCCTCACCGTGTTCCGCGTCCGC
GACCCGGCCACCCGCCTCGTGTCGGTCCGCGTCGTCGGCGTCTCGCCGAACCTGGCGCCC
CCGTCGCCCCAGATCAACGTGACGCTGCTGCTCACGGTGGCCGTGCACAACCCCAACCCG
GCGTCCTTCACCTACTCGTCCGACTCCGGCGGCCACGCCGACCTCACGTACCGCGGCGCC
CACGTCGGCGACGCCGTCGTCGAGGCCGGCCGCATCCCCAGCAGAGGGGACGGCGCCGTG
CAGATGGAGATGACGGTGCTGTCGAGCAGCTTCACCGGGGACGTCATGGCGGAGCTGATC
AGGGACATCGAGGCCGGCGCCGTGCCGTTCGACGCGAGCGCGAGGATCCCCGGGAAGGTG
GCCGTGTTCGGGGTGCTGAAGCTGCACGCGGTGGCGTACTCCGACTGCCATGTCGTCTTC
GGCGTCCCGGAGATGGGGATACGCAGCCAGGAGTGCCACGACCATGCCACGCTCTGA

Peptide Sequence

PEP ID

Os06t0521300-00
PEP Infomation

pep chromosome:IRGSP-1.0:6:19195774:19196540:-1 gene:Os06g0521300 transcript:Os06t0521300-00 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Harpin-induced protein 1 containing protein, expressed. (Os06t0521300-00)
Sequence

MATACTTTDGSGDVCLRPSASDGLPTHQACTSKAAPDGETRRRQHQRRRCCVVCLVVTIA
TLALLGVAVLVLSLTVFRVRDPATRLVSVRVVGVSPNLAPPSPQINVTLLLTVAVHNPNP
ASFTYSSDSGGHADLTYRGAHVGDAVVEAGRIPSRGDGAVQMEMTVLSSSFTGDVMAELI
RDIEAGAVPFDASARIPGKVAVFGVLKLHAVAYSDCHVVFGVPEMGIRSQECHDHATL

Transcript Sequence

Transcript ID

Os06t0521300-00
Transcript Infomation

cdna chromosome:IRGSP-1.0:6:19195774:19196540:-1 gene:Os06g0521300 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Harpin-induced protein 1 containing protein, expressed. (Os06t0521300-00)
Sequence

GCTCACTCGCTTCCAGCCATCCACTGCACTGCCGCTCGATCGACCACGCAATGGCCACTG
CCTGCACGACCACCGACGGCAGTGGCGACGTCTGTCTCCGTCCTTCCGCCTCCGACGGCC
TCCCCACACACCAGGCGTGCACCTCCAAGGCCGCCCCAGACGGCGAGACACGCCGGCGTC
AGCATCAGCGGCGGCGGTGCTGCGTCGTCTGCCTCGTCGTGACAATCGCCACGCTGGCGC
TCCTCGGCGTCGCCGTCCTCGTCCTCTCCCTCACCGTGTTCCGCGTCCGCGACCCGGCCA
CCCGCCTCGTGTCGGTCCGCGTCGTCGGCGTCTCGCCGAACCTGGCGCCCCCGTCGCCCC
AGATCAACGTGACGCTGCTGCTCACGGTGGCCGTGCACAACCCCAACCCGGCGTCCTTCA
CCTACTCGTCCGACTCCGGCGGCCACGCCGACCTCACGTACCGCGGCGCCCACGTCGGCG
ACGCCGTCGTCGAGGCCGGCCGCATCCCCAGCAGAGGGGACGGCGCCGTGCAGATGGAGA
TGACGGTGCTGTCGAGCAGCTTCACCGGGGACGTCATGGCGGAGCTGATCAGGGACATCG
AGGCCGGCGCCGTGCCGTTCGACGCGAGCGCGAGGATCCCCGGGAAGGTGGCCGTGTTCG
GGGTGCTGAAGCTGCACGCGGTGGCGTACTCCGACTGCCATGTCGTCTTCGGCGTCCCGG
AGATGGGGATACGCAGCCAGGAGTGCCACGACCATGCCACGCTCTGA