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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os06t0509900-00
CDS Infomation

cds chromosome:IRGSP-1.0:6:18201961:18202883:-1 gene:Os06g0509900 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:Thionin 1, thionin 2 description:Similar to Thionin. (Os06t0509900-00)
Sequence

ATGGAAGCTGTGAAGAGTTTGATTGTGTGTGTTCTGGTGCTAGGGTTAGTCCTGCAGCAT
GAGCATATCCAAGTGGAAGCTAAGAGCTGCTGCCCATCAACCACGGCAAGAAACATATAT
AACTCATGCCGTTTTACGGGTGCCTCAAGGGACAAATGTTGTAAAATCTCTGGCTGCAAA
ATTGTTGATGGGAAATGCAAGCCTCCTTTCATTCACCACACCCTTCACCCTGACTCTGAG
GAATCGGATGTATTGGACTTCTGCAAGCTAGGATGTACTTCGTCCGTATGCAGCAACATG
AATACTTTTGCTGGCAACGAAGAAGGGAATCATGCCGTTGATCGTTGCAACGAAGCGTGC
TACCGCTTCTGCACCAATGAAGCTGAAATTGTCACCGTTGCTTCCTAA

Peptide Sequence

PEP ID

Os06t0509900-00
PEP Infomation

pep chromosome:IRGSP-1.0:6:18201961:18202883:-1 gene:Os06g0509900 transcript:Os06t0509900-00 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:Thionin 1, thionin 2 description:Similar to Thionin. (Os06t0509900-00)
Sequence

MEAVKSLIVCVLVLGLVLQHEHIQVEAKSCCPSTTARNIYNSCRFTGASRDKCCKISGCK
IVDGKCKPPFIHHTLHPDSEESDVLDFCKLGCTSSVCSNMNTFAGNEEGNHAVDRCNEAC
YRFCTNEAEIVTVAS

Transcript Sequence

Transcript ID

Os06t0509900-00
Transcript Infomation

cdna chromosome:IRGSP-1.0:6:18201961:18202883:-1 gene:Os06g0509900 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:Thionin 1, thionin 2 description:Similar to Thionin. (Os06t0509900-00)
Sequence

ATGGAAGCTGTGAAGAGTTTGATTGTGTGTGTTCTGGTGCTAGGGTTAGTCCTGCAGCAT
GAGCATATCCAAGTGGAAGCTAAGAGCTGCTGCCCATCAACCACGGCAAGAAACATATAT
AACTCATGCCGTTTTACGGGTGCCTCAAGGGACAAATGTTGTAAAATCTCTGGCTGCAAA
ATTGTTGATGGGAAATGCAAGCCTCCTTTCATTCACCACACCCTTCACCCTGACTCTGAG
GAATCGGATGTATTGGACTTCTGCAAGCTAGGATGTACTTCGTCCGTATGCAGCAACATG
AATACTTTTGCTGGCAACGAAGAAGGGAATCATGCCGTTGATCGTTGCAACGAAGCGTGC
TACCGCTTCTGCACCAATGAAGCTGAAATTGTCACCGTTGCTTCCTAAGCAAAGTGCATC
GATCATGCAAAGTTATGCCGCTCTGGAGTAGTCATAAATAAGTTGGATATGATGATATCC
AAAGCCAGAGTGCCATGGATCTCTATCTTGTCTTGTGCCACTTTATATTTCCAATAAGCC
ATGATAATCGCGTGATCTGCCATCTTTTCTGTATCAGTATGTGAGCATATGTAGAGTGAT
AATATCATTGGCTAATAAAT