Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os06t0507300-01
CDS Infomation

cds chromosome:IRGSP-1.0:6:18079011:18079819:-1 gene:Os06g0507300 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to GAMYB-binding protein. (Os06t0507300-01)
Sequence

ATGGCGTCCAAGGACCAAACCGCATCCTCGTCGGAGACGACGACGGCGGTGGCGGATGAT
ACCTCCAGCCAACAAGACGCACCGCCCCACCCGCTGCAGGTGACTTCGCCGGATTCTTCG
TTGCCGTCGCCGTCGCCGCGGCAACGCCGGTGCGTGGCGGCGTACATGGACCTGACGCGG
GAGGAGTGCGGCCGCCTCTTCCCGTCGGGGCGGCTCCGCTCGCAGCCGCTCCGCCTCGCC
GGGCGGCCGTTCTACCTCACGGCGCGCTGCAACATGGACCAGCGGGACACCTTCCGCTGC
TTCGGCCTCTTCCTCGCCATGGAGGTCGACGACGAGGAGGAGGAAGAGGAGGGCTCGCCG
TCGCCGGCGGCGAGCGTCACCGTGGAATACGACTTCGCCGCGAGGACGAGGCAGCAGTCA
GGGGATGAGTTCGTCAGCATGTACAAGGGGCACTACACCTTCGCCGCCGGGAAGTCGTGT
GGATACCGGAATCTGCTTGGGATGCCATGGGCGTCGTTCATGGGTGATGGTGGTGGTGAC
AGCGTGTTCTTCATCGATGGGGTGCTGCACTTGAGGGCTGAATTATGTGTCAAAGAAGAT
GCTTAA

Peptide Sequence

PEP ID

Os06t0507300-01
PEP Infomation

pep chromosome:IRGSP-1.0:6:18079011:18079819:-1 gene:Os06g0507300 transcript:Os06t0507300-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to GAMYB-binding protein. (Os06t0507300-01)
Sequence

MASKDQTASSSETTTAVADDTSSQQDAPPHPLQVTSPDSSLPSPSPRQRRCVAAYMDLTR
EECGRLFPSGRLRSQPLRLAGRPFYLTARCNMDQRDTFRCFGLFLAMEVDDEEEEEEGSP
SPAASVTVEYDFAARTRQQSGDEFVSMYKGHYTFAAGKSCGYRNLLGMPWASFMGDGGGD
SVFFIDGVLHLRAELCVKEDA

Transcript Sequence

Transcript ID

Os06t0507300-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:6:18079011:18079819:-1 gene:Os06g0507300 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to GAMYB-binding protein. (Os06t0507300-01)
Sequence

AGCACTACTGTCTCGCGAGAAAACTTCTTTCATTGTTTTGTAACTAAGCGGTGTCACTCC
TCAAAGCTACACAAGCTAGCTCATCCTGAAATTCTCAGACAACCTGAGCTCAGCTAGCGC
TGAGCTGAGCTCCATGGCGTCCAAGGACCAAACCGCATCCTCGTCGGAGACGACGACGGC
GGTGGCGGATGATACCTCCAGCCAACAAGACGCACCGCCCCACCCGCTGCAGGTGACTTC
GCCGGATTCTTCGTTGCCGTCGCCGTCGCCGCGGCAACGCCGGTGCGTGGCGGCGTACAT
GGACCTGACGCGGGAGGAGTGCGGCCGCCTCTTCCCGTCGGGGCGGCTCCGCTCGCAGCC
GCTCCGCCTCGCCGGGCGGCCGTTCTACCTCACGGCGCGCTGCAACATGGACCAGCGGGA
CACCTTCCGCTGCTTCGGCCTCTTCCTCGCCATGGAGGTCGACGACGAGGAGGAGGAAGA
GGAGGGCTCGCCGTCGCCGGCGGCGAGCGTCACCGTGGAATACGACTTCGCCGCGAGGAC
GAGGCAGCAGTCAGGGGATGAGTTCGTCAGCATGTACAAGGGGCACTACACCTTCGCCGC
CGGGAAGTCGTGTGGATACCGGAATCTGCTTGGGATGCCATGGGCGTCGTTCATGGGTGA
TGGTGGTGGTGACAGCGTGTTCTTCATCGATGGGGTGCTGCACTTGAGGGCTGAATTATG
TGTCAAAGAAGATGCTTAATTAGATCGATCGAATTAATATGGATATATTGTACGGCGTTC
GTGAATTGAGAATGCTTCATAGCCTTTTG