Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os06t0506100-01
CDS Infomation	cds chromosome:IRGSP-1.0:6:17997701:18000859:1 gene:Os06g0506100 gene_biotype:protein_coding transcript_biotype:protein_coding description:Pentatricopeptide repeat domain containing protein. (Os06t0506100-01)
Sequence	ATGCAGAACCCCAACGGCACCATCCTCCAGCTCTACCACGCCGGCAGGCTCGCCGCCGCC CTCCGCGCCTTCGAGTCGCTCCCCTCCTCCTCCCCCGCCTCCGCCGCCGCCGCCCCAGCC CCTCTCACCGCCGCGACCTACGCCGCCCTCGTCTCCGCGTGCTCCCGCCTGCGCTCCCTC CCGCAAGGCCGCCGCGTCCACCGCCACCTCGTGGCCTCCTCATCCTCCTCGCCGGATGCA CAGCTCGCTGGGAACACCGTCCTCGGCAACCACCTCATCACCATGTACGGGCGGTGCGCC GCCCCGGACTCCGCCCGCCAGGTGTTCGACGAAATGCCCGCCAGGAACCCCGTCTCCTGG GCCTCCGTCATCGCCGCGCACGTGCAGAACGGCCGCGCCGGTGACGCTCTCGGGTTGTTC TCGTCCATGCTACGGTCAGGAACTGCCGCAGACCAGTTTGCCCTCGGCAGTGCCGTGCGT GCTTGCACGGAGCTTGGGGACGTCGGCACCGGGAGGCAGGTGCATGCGCATGCGTTGAAG TCAGAGAGAGGCAGTGACCTGATTGTGCAGAACGCACTCGTCACAATGTACTCCAAGAAT GGCTTGGTTGACGATGGATTCATGCTCTTTGAGAGGATTAAAGATAAAGACTTAATTTCC TGGGGGTCAATTATCGCTGGGTTTGCTCAACAAGGTTTTGAAATGGAGGCACTACAGGTT TTCAGGGAGATGATTGTTGAGGGCTCGCATCATCCGAACGAGTTTCATTTTGGTAGTGCC TTTCGTGCATGTGGGGCTGTGGGCAGCTGGGAGTATGGAGAGCAGATTCATGGCTTATCC ATCAAGTATAGGTTGGACCGTGATTTATATGTAGGATGCTCACTGAGCGACATGTATGCG CGATGCAAGAATCTGGACTCTGCAAGGGTAGCATTTTACAGGATTGAGGCACCGGATTTA GTTTCTTGGAATTCCATAGTAAATGCATACTCTGTTGAGGGCCTACTTAGTGAGGCCTTG GTCCTGTTCTCTGAGATGAGAGACTCTGGTTTGAGGCCTGATGGTATTACTGTTAGGGGC CTGTTGTGTGCATGTGTTGGCCGTGATGCCCTATATCATGGTAGGCTGATCCACTCCTAC TTGGTCAAATTGGGTTTAGATGGGGATGTTTCAGTCTGCAATTCTTTACTCAGCATGTAT GCAAGGTGTTCAGATTTATCCTCTGCGATGGATGTTTTTCATGAGATAAAGGATCAGGAC GTTGTAACCTGGAACAGCATTCTTACTGCCTGTGCCCAACACAACCATCCGGAAGAAGTC CTGAAGTTGTTTAGTCTCTTGAACAAGTCTGAACCGAGTCTGGATAGGATTAGTTTAAAC AATGTACTGAGTGCTTCTGCTGAATTGGGTTACTTTGAAATGGTGAAACAGGTTCATGCA TATGCTTTCAAGGCAGGACTAGTGGATGATAGAATGCTTAGTAATACTCTAATTGACACT TATGCTAAATGTGGGAGTTTAGATGATGCCATGAGACTCTTTGAAATAATGGGAAACAAT CGTGATGTGTTCTCTTGGAGCAGCTTGATTGTTGGATATGCCCAATTTGGTTATGCAAAG GAAGCATTTGATTTATTTTCGAGGATGAGAAGCCTAGGAATCAGGCCAAACCATGTAACG TTTATCGGAGTTCTTACAGCATGCAGCCGAGTCGGTTTTGTTAACGAAGGCTGCTATTAC TACAGCATTATGGAGCCTGAGTATGGCATTGTTCCAACACGAGAGCATTGTTCATGTATC GTTGATTTGTTGGCTCGTGCTGGGAAACTAACTGAGGCAGCAAATTTTATTGACCAAATG CCATTTGAGCCTGATATTATAATGTGGAAGACCCTGCTGGCTGCTAGCAAAATGCACAAT GATATGGAGATGGGAAAGAGGGCAGCAGAAGGTATTCTGAATATTGATCCTTCCCATTCA GCGGCCTATGTCTTGCTGTGCAACATATATGCTGCTTCTGGCAATTGGAATGAGTTTGCA AGATTGAAGAAGGCGATGAGAACTAGCGGCGTTAAGAAATCACCTGGGAAGAGTTGGGTT AAGCTGAAAGGGGAGCTAAAAGTCTTTATAGTGGAGGACAGGTCACATCCAGAGTCTGAG GAAATATACGCAATGCTGGAGTTAATTGGAATGGAAATGATAAAAGCTGGTTATGTTCCA AAGCATTCATGGAAACATGCTATTGTTGATCATATTGATAGTGATTTGTTCAATGAAGAG ATGCTAGCTGAATATGGTTGA

Peptide Sequence

PEP ID	Os06t0506100-01
PEP Infomation	pep chromosome:IRGSP-1.0:6:17997701:18000859:1 gene:Os06g0506100 transcript:Os06t0506100-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Pentatricopeptide repeat domain containing protein. (Os06t0506100-01)
Sequence	MQNPNGTILQLYHAGRLAAALRAFESLPSSSPASAAAAPAPLTAATYAALVSACSRLRSL PQGRRVHRHLVASSSSSPDAQLAGNTVLGNHLITMYGRCAAPDSARQVFDEMPARNPVSW ASVIAAHVQNGRAGDALGLFSSMLRSGTAADQFALGSAVRACTELGDVGTGRQVHAHALK SERGSDLIVQNALVTMYSKNGLVDDGFMLFERIKDKDLISWGSIIAGFAQQGFEMEALQV FREMIVEGSHHPNEFHFGSAFRACGAVGSWEYGEQIHGLSIKYRLDRDLYVGCSLSDMYA RCKNLDSARVAFYRIEAPDLVSWNSIVNAYSVEGLLSEALVLFSEMRDSGLRPDGITVRG LLCACVGRDALYHGRLIHSYLVKLGLDGDVSVCNSLLSMYARCSDLSSAMDVFHEIKDQD VVTWNSILTACAQHNHPEEVLKLFSLLNKSEPSLDRISLNNVLSASAELGYFEMVKQVHA YAFKAGLVDDRMLSNTLIDTYAKCGSLDDAMRLFEIMGNNRDVFSWSSLIVGYAQFGYAK EAFDLFSRMRSLGIRPNHVTFIGVLTACSRVGFVNEGCYYYSIMEPEYGIVPTREHCSCI VDLLARAGKLTEAANFIDQMPFEPDIIMWKTLLAASKMHNDMEMGKRAAEGILNIDPSHS AAYVLLCNIYAASGNWNEFARLKKAMRTSGVKKSPGKSWVKLKGELKVFIVEDRSHPESE EIYAMLELIGMEMIKAGYVPKHSWKHAIVDHIDSDLFNEEMLAEYG

Transcript Sequence

Transcript ID	Os06t0506100-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:6:17997701:18000859:1 gene:Os06g0506100 gene_biotype:protein_coding transcript_biotype:protein_coding description:Pentatricopeptide repeat domain containing protein. (Os06t0506100-01)
Sequence	ACTGCTAAGTGGCCCCCTCCCAACTCCGACGACCCCGCCGCCGCCACCGCCGCCGCCGCC GATGCAGAACCCCAACGGCACCATCCTCCAGCTCTACCACGCCGGCAGGCTCGCCGCCGC CCTCCGCGCCTTCGAGTCGCTCCCCTCCTCCTCCCCCGCCTCCGCCGCCGCCGCCCCAGC CCCTCTCACCGCCGCGACCTACGCCGCCCTCGTCTCCGCGTGCTCCCGCCTGCGCTCCCT CCCGCAAGGCCGCCGCGTCCACCGCCACCTCGTGGCCTCCTCATCCTCCTCGCCGGATGC ACAGCTCGCTGGGAACACCGTCCTCGGCAACCACCTCATCACCATGTACGGGCGGTGCGC CGCCCCGGACTCCGCCCGCCAGGTGTTCGACGAAATGCCCGCCAGGAACCCCGTCTCCTG GGCCTCCGTCATCGCCGCGCACGTGCAGAACGGCCGCGCCGGTGACGCTCTCGGGTTGTT CTCGTCCATGCTACGGTCAGGAACTGCCGCAGACCAGTTTGCCCTCGGCAGTGCCGTGCG TGCTTGCACGGAGCTTGGGGACGTCGGCACCGGGAGGCAGGTGCATGCGCATGCGTTGAA GTCAGAGAGAGGCAGTGACCTGATTGTGCAGAACGCACTCGTCACAATGTACTCCAAGAA TGGCTTGGTTGACGATGGATTCATGCTCTTTGAGAGGATTAAAGATAAAGACTTAATTTC CTGGGGGTCAATTATCGCTGGGTTTGCTCAACAAGGTTTTGAAATGGAGGCACTACAGGT TTTCAGGGAGATGATTGTTGAGGGCTCGCATCATCCGAACGAGTTTCATTTTGGTAGTGC CTTTCGTGCATGTGGGGCTGTGGGCAGCTGGGAGTATGGAGAGCAGATTCATGGCTTATC CATCAAGTATAGGTTGGACCGTGATTTATATGTAGGATGCTCACTGAGCGACATGTATGC GCGATGCAAGAATCTGGACTCTGCAAGGGTAGCATTTTACAGGATTGAGGCACCGGATTT AGTTTCTTGGAATTCCATAGTAAATGCATACTCTGTTGAGGGCCTACTTAGTGAGGCCTT GGTCCTGTTCTCTGAGATGAGAGACTCTGGTTTGAGGCCTGATGGTATTACTGTTAGGGG CCTGTTGTGTGCATGTGTTGGCCGTGATGCCCTATATCATGGTAGGCTGATCCACTCCTA CTTGGTCAAATTGGGTTTAGATGGGGATGTTTCAGTCTGCAATTCTTTACTCAGCATGTA TGCAAGGTGTTCAGATTTATCCTCTGCGATGGATGTTTTTCATGAGATAAAGGATCAGGA CGTTGTAACCTGGAACAGCATTCTTACTGCCTGTGCCCAACACAACCATCCGGAAGAAGT CCTGAAGTTGTTTAGTCTCTTGAACAAGTCTGAACCGAGTCTGGATAGGATTAGTTTAAA CAATGTACTGAGTGCTTCTGCTGAATTGGGTTACTTTGAAATGGTGAAACAGGTTCATGC ATATGCTTTCAAGGCAGGACTAGTGGATGATAGAATGCTTAGTAATACTCTAATTGACAC TTATGCTAAATGTGGGAGTTTAGATGATGCCATGAGACTCTTTGAAATAATGGGAAACAA TCGTGATGTGTTCTCTTGGAGCAGCTTGATTGTTGGATATGCCCAATTTGGTTATGCAAA GGAAGCATTTGATTTATTTTCGAGGATGAGAAGCCTAGGAATCAGGCCAAACCATGTAAC GTTTATCGGAGTTCTTACAGCATGCAGCCGAGTCGGTTTTGTTAACGAAGGCTGCTATTA CTACAGCATTATGGAGCCTGAGTATGGCATTGTTCCAACACGAGAGCATTGTTCATGTAT CGTTGATTTGTTGGCTCGTGCTGGGAAACTAACTGAGGCAGCAAATTTTATTGACCAAAT GCCATTTGAGCCTGATATTATAATGTGGAAGACCCTGCTGGCTGCTAGCAAAATGCACAA TGATATGGAGATGGGAAAGAGGGCAGCAGAAGGTATTCTGAATATTGATCCTTCCCATTC AGCGGCCTATGTCTTGCTGTGCAACATATATGCTGCTTCTGGCAATTGGAATGAGTTTGC AAGATTGAAGAAGGCGATGAGAACTAGCGGCGTTAAGAAATCACCTGGGAAGAGTTGGGT TAAGCTGAAAGGGGAGCTAAAAGTCTTTATAGTGGAGGACAGGTCACATCCAGAGTCTGA GGAAATATACGCAATGCTGGAGTTAATTGGAATGGAAATGATAAAAGCTGGTTATGTTCC AAAGCATTCATGGAAACATGCTATTGTTGATCATATTGATAGTGATTTGTTCAATGAAGA GATGCTAGCTGAATATGGTTGAGTGGGAGATAAAGAAAACAGTAATTGCTGACTCTGGGG TATTCGCATGTCTTCCTTGTTGTAAGAAATACTTGTTAATCACCAAGATAATTATTAAAG CTTTGTCAGAATTACAATGCAACATACAGAAGTTGCATAAGCTTGGCATCATGCACCATT TGAGAACTTACCAGTATGTTATAGATTATATTTTGCCTAAATAATTTGAAAGAAGAAGTG GGTTCGACAAATCATGCATAGTCAGCCTGCTGAAGGAGCTAAGCTATTCATGTAATCTTG CTAATGATATGCGAAGCACAACTGGGGCTTATGTATTTGTTTGATCTGTCACATATTTCT GCCAAGTAAGATTTAATCCAGTGAGCCATACACAAGGGGGCATTCCTTTTCCTCATCCAG CTTGCTACTCCTTTCTTTGGCTTCCAGATATGAACTTGGCTAACCTGAGGAAATGCGTTT TGCAAGGTTCGTTGACAGTGATCTTGCTATTTGATACATGAAGGCAGGCTGTATTTGTTT TATCAGCCAGATATTTCTGCTATGTAGGTTTCAGTTCAGTGCGCTATACACAAGATGAGA ACTTGATCTCTTGC