Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os06t0506000-01
CDS Infomation

cds chromosome:IRGSP-1.0:6:17993237:17995212:1 gene:Os06g0506000 gene_biotype:protein_coding transcript_biotype:protein_coding description:Conserved hypothetical protein. (Os06t0506000-01)
Sequence

ATGAGATTGCCCGCATCGTCGTCGTCGGCGGCGGGGCTGCAGGAGCGCATCTGGGACCTC
CACGACAATCTCAGCCACGCCATCCTCTCCCTCTCCGCCTCCGCCCACCGCTGCTGCCGC
CGCCGCGCCCCCGAAGGGCGCGTGGTCGTCAAGGGGTGGCGGCGGCAGGGAGGATGTGGG
GACTGCGGCCTGGAGCAGGAGGCGGCTGCGGCGGCCACCATGGCGGACGCGCGGAGCCTT
CACGCCGTCCGCGCCGCGCTCGAGGACCTCGAGGGCCACCTCCATTTCCTCCACAACATT
CAATTATGTCAGGTGGCAGAACGAGATGCCGCGATTGCTAGGCTGCAGCAAAGTCGTATT
CTGCTTGCTACAAGATTGGCTGAACATAGGTGGAAGAAGCATGAAGTTATTGAGGAGGCC
TTAGCTTTTGTTGATGATGCGCTTGACAAGAGTCGATTTGTCTCACCAGAAGATGTCCGT
GGGACGCATACACACAGCCAATCAGTAGAGAACCAGTGCCCCAAGATACATGATTCAAAC
TTCTTGGTGCGTTTTTTATCCTGTACATTAGCTATAGCTAAGAATTCTTTAAGATTTGAG
AGGATTGGTGGTGCACTCGGTAATACCGCGATGTTTGCAGTAAGTATGCTTGCATTCTTG
CAGCTGCAACAAGTGGCCTTTGGTAAACAAACTCCAGCAGTACAATGTAGACGAGTCAAT
TATTTTCATTCTCAGATGTCTGTAAAGAACACTAAAGAAAAGCATCTGGTCGTATTGTTA
GCTAGAGGATGA

Peptide Sequence

PEP ID

Os06t0506000-01
PEP Infomation

pep chromosome:IRGSP-1.0:6:17993237:17995212:1 gene:Os06g0506000 transcript:Os06t0506000-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Conserved hypothetical protein. (Os06t0506000-01)
Sequence

MRLPASSSSAAGLQERIWDLHDNLSHAILSLSASAHRCCRRRAPEGRVVVKGWRRQGGCG
DCGLEQEAAAAATMADARSLHAVRAALEDLEGHLHFLHNIQLCQVAERDAAIARLQQSRI
LLATRLAEHRWKKHEVIEEALAFVDDALDKSRFVSPEDVRGTHTHSQSVENQCPKIHDSN
FLVRFLSCTLAIAKNSLRFERIGGALGNTAMFAVSMLAFLQLQQVAFGKQTPAVQCRRVN
YFHSQMSVKNTKEKHLVVLLARG

Transcript Sequence

Transcript ID

Os06t0506000-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:6:17993237:17995212:1 gene:Os06g0506000 gene_biotype:protein_coding transcript_biotype:protein_coding description:Conserved hypothetical protein. (Os06t0506000-01)
Sequence

AAAAAAATAAAAAAAAAACCGGCTTCTCCGCCTATCGTGCCCAGGTGTGCGCGGCTCTCT
TCTCCTCCATCGGCGACGAGCCACTCCTGCGATGAGATGAGATTGCCCGCATCGTCGTCG
TCGGCGGCGGGGCTGCAGGAGCGCATCTGGGACCTCCACGACAATCTCAGCCACGCCATC
CTCTCCCTCTCCGCCTCCGCCCACCGCTGCTGCCGCCGCCGCGCCCCCGAAGGGCGCGTG
GTCGTCAAGGGGTGGCGGCGGCAGGGAGGATGTGGGGACTGCGGCCTGGAGCAGGAGGCG
GCTGCGGCGGCCACCATGGCGGACGCGCGGAGCCTTCACGCCGTCCGCGCCGCGCTCGAG
GACCTCGAGGGCCACCTCCATTTCCTCCACAACATTCAATTATGTCAGGTGGCAGAACGA
GATGCCGCGATTGCTAGGCTGCAGCAAAGTCGTATTCTGCTTGCTACAAGATTGGCTGAA
CATAGGTGGAAGAAGCATGAAGTTATTGAGGAGGCCTTAGCTTTTGTTGATGATGCGCTT
GACAAGAGTCGATTTGTCTCACCAGAAGATGTCCGTGGGACGCATACACACAGCCAATCA
GTAGAGAACCAGTGCCCCAAGATACATGATTCAAACTTCTTGGTGCGTTTTTTATCCTGT
ACATTAGCTATAGCTAAGAATTCTTTAAGATTTGAGAGGATTGGTGGTGCACTCGGTAAT
ACCGCGATGTTTGCAGTAAGTATGCTTGCATTCTTGCAGCTGCAACAAGTGGCCTTTGGT
AAACAAACTCCAGCAGTACAATGTAGACGAGTCAATTATTTTCATTCTCAGATGTCTGTA
AAGAACACTAAAGAAAAGCATCTGGTCGTATTGTTAGCTAGAGGATGAGGAAATCATCAT
TGTTTGATGTATAGATAAGTTTTGTTCTGTTCAC